FFCP PHASE1:Hg19::chr17:57184170..57184257,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:57184170..57184257,-
|short_description=p1@TRIM37
|description=CAGE_peak_1_at_TRIM37_5end
|association_with_transcript=0bp_to_ENST00000393065_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4591 | |EntrezGene=4591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7523 | |HGNC=7523 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEE6 | |UniProt=F8WEE6 | ||
|association_with_transcript=0bp_to_ENST00000393065_5end | |||
|cluster_id=chr17:57184170..57184257,- | |||
|coexpression_cluster_id=C3659 | |||
|description=CAGE_peak_1_at_TRIM37_5end | |||
|id=chr17:57184170..57184257,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.58e-07;18!CL:0000789;9.58e-07;18!CL:0002419;9.58e-07;18 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.56e-09;82!CL:0000790;9.58e-07;18 | |||
|ontology_enrichment_disease=DOID:0050687!1.22e-09!143;DOID:305!1.71e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.22e-09,143;DOID:305,1.71e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.12e-28!82;UBERON:0005743!1.86e-28!86;UBERON:0000073!6.67e-28!94;UBERON:0001016!6.67e-28!94;UBERON:0001049!7.97e-24!57;UBERON:0005068!7.97e-24!57;UBERON:0006241!7.97e-24!57;UBERON:0007135!7.97e-24!57;UBERON:0000955!2.12e-23!69;UBERON:0006238!2.12e-23!69;UBERON:0002780!4.53e-21!41;UBERON:0001890!4.53e-21!41;UBERON:0006240!4.53e-21!41;UBERON:0002616!1.04e-20!59;UBERON:0003075!1.32e-20!86;UBERON:0007284!1.32e-20!86;UBERON:0003080!2.94e-20!42;UBERON:0002346!4.61e-20!90;UBERON:0004121!1.47e-19!169;UBERON:0000924!2.14e-19!173;UBERON:0006601!2.14e-19!173;UBERON:0001893!6.96e-19!34;UBERON:0002020!1.03e-18!34;UBERON:0003528!1.03e-18!34;UBERON:0001869!2.92e-18!32;UBERON:0002791!3.18e-18!33;UBERON:0003056!2.15e-15!61;UBERON:0000153!3.60e-15!129;UBERON:0007811!3.60e-15!129;UBERON:0000033!1.02e-14!123;UBERON:0000956!1.44e-14!25;UBERON:0000203!1.44e-14!25;UBERON:0002619!4.65e-14!22;UBERON:0007023!5.78e-13!115;UBERON:0001950!6.15e-13!20;UBERON:0000025!3.45e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.07e-16;32!UBERON:0001893;1.15e-16;34!UBERON:0003528;2.20e-16;34!UBERON:0002020;2.20e-16;34!UBERON:0002791;2.82e-16;32!UBERON:0002780;2.14e-15;41!UBERON:0001890;2.14e-15;41!UBERON:0000956;1.09e-14;25!UBERON:0000203;1.09e-14;25!UBERON:0002619;4.06e-14;22!UBERON:0000073;6.33e-14;53!UBERON:0002616;6.33e-14;53!UBERON:0001950;5.39e-13;20!UBERON:0000955;1.88e-11;68!UBERON:0001017;2.24e-11;75!UBERON:0001016;2.42e-10;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.60e-29,81;UBERON:0001016,1.32e-28,89;UBERON:0001049,1.48e-24,56;UBERON:0005068,1.48e-24,56;UBERON:0006241,1.48e-24,56;UBERON:0007135,1.48e-24,56;UBERON:0000955,5.11e-24,68;UBERON:0006238,5.11e-24,68;UBERON:0000073,3.14e-23,53;UBERON:0002616,3.14e-23,53;UBERON:0002780,4.53e-21,41;UBERON:0001890,4.53e-21,41;UBERON:0003080,4.53e-21,41;UBERON:0006240,4.53e-21,41;UBERON:0003075,1.48e-19,82;UBERON:0007284,1.48e-19,82;UBERON:0002346,5.15e-19,86;UBERON:0001893,6.95e-19,34;UBERON:0003528,1.02e-18,34;UBERON:0002020,1.02e-18,34;UBERON:0004121,1.88e-18,171;UBERON:0000924,1.88e-18,171;UBERON:0006601,1.88e-18,171;UBERON:0001869,2.92e-18,32;UBERON:0002791,1.06e-17,32;UBERON:0010371,7.48e-17,104;UBERON:0003056,3.61e-16,61;UBERON:0010314,6.23e-15,132;UBERON:0000956,1.44e-14,25;UBERON:0000203,1.44e-14,25;UBERON:0002619,4.65e-14,22;UBERON:0011216,1.57e-13,223;UBERON:0001950,6.15e-13,20;UBERON:0007023,1.43e-12,114;UBERON:0000025,1.80e-07,192 | |||
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| ||
|short_description=p1@TRIM37 | |||
}} | }} |
Latest revision as of 12:25, 16 September 2015
Short description: | p1@TRIM37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM37_5end |
Coexpression cluster: | C3659_breast_MCF7_cerebellum_occipital_pons_frontal_paracentral |
Association with transcript: | 0bp_to_ENST00000393065_5end |
EntrezGene: | TRIM37 |
HGNC: | 7523 |
UniProt: | F8WEE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.22e-09 | 143 |
carcinoma | 1.71e-09 | 106 |