FFCP PHASE1:Hg19::chr1:2036149..2036162,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5590 | |EntrezGene=5590 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9412 | |HGNC=9412 | ||
|TSSclassifier=strong | |||
|UniProt=Q05513,D6RDM0 | |UniProt=Q05513,D6RDM0 | ||
|association_with_transcript=0bp_to_ENST00000400920,ENST00000482686,NM_001033582,uc001ais.2_5end | |association_with_transcript=0bp_to_ENST00000400920,ENST00000482686,NM_001033582,uc001ais.2_5end | ||
|cluster_id=chr1:2036149..2036162,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_4_at_PRKCZ_5end | |description=CAGE_peak_4_at_PRKCZ_5end | ||
|id=chr1:2036149..2036162,+ | |id=chr1:2036149..2036162,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.18e-08!7;CL:0000586!3.18e-08!7;CL:0000775!7.18e-08!3;CL:0000094!2.77e-07!8;CL:0002150!3.26e-07!3;CL:0000861!3.26e-07!3;CL:0000081!4.37e-07!11 | |ontology_enrichment_celltype=CL:0000039!3.18e-08!7;CL:0000586!3.18e-08!7;CL:0000775!7.18e-08!3;CL:0000094!2.77e-07!8;CL:0002150!3.26e-07!3;CL:0000861!3.26e-07!3;CL:0000081!4.37e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.79e-10;3!CL:0000039;5.29e-10;7!CL:0000586;5.29e-10;7!CL:0000817;7.01e-09;1!CL:0000094;1.12e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.79e-10,3;CL:0000039,5.21e-10,7;CL:0000586,5.21e-10,7;CL:0000094,1.12e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.67e-11;30!UBERON:0003124;5.59e-09;1!UBERON:0008947;2.70e-08;29!UBERON:0004140;3.17e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1325;8.22e-10;7!DOID:3904;8.22e-10;7!DOID:1799;1.42e-08;1!DOID:0050619;1.42e-08;1!DOID:10165;1.42e-08;1!DOID:1357;1.42e-08;1!DOID:1798;1.42e-08;1!DOID:0050615;2.25e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,7.97e-10,7;DOID:3904,7.97e-10,7;DOID:0050619,1.37e-08,1;DOID:1357,1.37e-08,1;DOID:1799,1.59e-08,1;DOID:10165,1.59e-08,1;DOID:1798,1.59e-08,1;DOID:0050615,2.20e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.17e-12!115 | |ontology_enrichment_uberon=UBERON:0007023!8.17e-12!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002048;4.29e-11;22!UBERON:0000117;4.29e-11;22!UBERON:0000171;4.29e-11;22!UBERON:0000170;4.29e-11;22!UBERON:0001764;1.42e-08;1!UBERON:0001825;1.42e-08;1!UBERON:0002171;3.17e-08;1!UBERON:0006518;3.17e-08;1!UBERON:0008949;3.17e-08;1!UBERON:0000101;3.17e-08;1!UBERON:0002167;3.17e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.29e-11,22;UBERON:0000117,4.29e-11,22;UBERON:0000171,4.29e-11,22;UBERON:0000170,4.29e-11,22;UBERON:0005597,4.29e-11,22;UBERON:0000118,4.29e-11,22;UBERON:0001764,1.37e-08,1;UBERON:0001825,1.37e-08,1;UBERON:0002171,3.28e-08,1;UBERON:0006518,3.28e-08,1;UBERON:0008949,3.28e-08,1;UBERON:0000101,3.28e-08,1;UBERON:0002167,3.28e-08,1;UBERON:0005178,5.34e-07,34;UBERON:0002224,5.34e-07,34;UBERON:0005181,8.75e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,6.97801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24304916763028,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0.223874754722178,0,0,0,0,0,96.8585509488589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.4973957961986,0,0,0,0,0.507447609232169,0,1.13929437434833,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,47.7531094952032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60061482596342,0,0,2.86433879480975,0,0,0,0,0,0,0,0,0,0,0,3.55955110409873,6.38246740773428,0,0,0,0,0,0,0.884634079449797,0.295547618953547,0,0,0,0,0,5.99466151408956,6.37279275309382,11.8425635394989,0,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0.290268993867255,0.365446585430928,0.656923656425674,0.0969890164884194,0,0.451961481561065,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14211903227435,0,0,0.551482276150566,0.412079291905832,0.741438982396034,0,0.0846733320657845,0,0,0,0,0,0,0,0.182248669974074,0,0.315222829196793,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,3.09683496446315,1.41483874589699,1.24271716604159,0,0,0,0,0,0,0,0,5.81100156125867,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,5.23813388962845,0,0.147856086217045,0,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,1.82089681270989,0.91064876540519,350.374362142423,0,0,0.271878931907327,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4152485919705,0,0,0,0,0.485710993059139,0,1.79055697645231,0,0.33883824611688,0,3.32118255846682,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.18378979906969,0,0,0,0,0,1.0661699095049,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,6.97801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24304916763028,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0.223874754722178,0,0,0,0,0,96.8585509488589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.4973957961986,0,0,0,0,0.507447609232169,0,1.13929437434833,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,47.7531094952032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60061482596342,0,0,2.86433879480975,0,0,0,0,0,0,0,0,0,0,0,3.55955110409873,6.38246740773428,0,0,0,0,0,0,0.884634079449797,0.295547618953547,0,0,0,0,0,5.99466151408956,6.37279275309382,11.8425635394989,0,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0.290268993867255,0.365446585430928,0.656923656425674,0.0969890164884194,0,0.451961481561065,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14211903227435,0,0,0.551482276150566,0.412079291905832,0.741438982396034,0,0.0846733320657845,0,0,0,0,0,0,0,0.182248669974074,0,0.315222829196793,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,3.09683496446315,1.41483874589699,1.24271716604159,0,0,0,0,0,0,0,0,5.81100156125867,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,5.23813388962845,0,0.147856086217045,0,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,1.82089681270989,0.91064876540519,350.374362142423,0,0,0.271878931907327,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4152485919705,0,0,0,0,0.485710993059139,0,1.79055697645231,0,0.33883824611688,0,3.32118255846682,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.18378979906969,0,0,0,0,0,1.0661699095049,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@PRKCZ | |short_description=p4@PRKCZ | ||
}} | }} |
Latest revision as of 23:39, 19 September 2015
Short description: | p4@PRKCZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRKCZ_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000400920, ENST00000482686, NM_001033582, uc001ais.2_5end |
EntrezGene: | PRKCZ |
HGNC: | 9412 |
UniProt: | Q05513D6RDM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.79e-10 | 3 |
germ line cell | 5.21e-10 | 7 |
germ cell | 5.21e-10 | 7 |
granulocyte | 1.12e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
lung | 4.29e-11 | 22 |
respiratory tube | 4.29e-11 | 22 |
respiration organ | 4.29e-11 | 22 |
pair of lungs | 4.29e-11 | 22 |
lung primordium | 4.29e-11 | 22 |
lung bud | 4.29e-11 | 22 |
maxillary sinus | 1.37e-08 | 1 |
paranasal sinus | 1.37e-08 | 1 |
lower lobe of right lung | 3.28e-08 | 1 |
right lung lobe | 3.28e-08 | 1 |
lower lobe of lung | 3.28e-08 | 1 |
lobe of lung | 3.28e-08 | 1 |
right lung | 3.28e-08 | 1 |
thoracic cavity element | 5.34e-07 | 34 |
thoracic cavity | 5.34e-07 | 34 |
thoracic segment organ | 8.75e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 7.97e-10 | 7 |
bronchogenic carcinoma | 7.97e-10 | 7 |
paranasal sinus cancer | 1.37e-08 | 1 |
maxillary sinus cancer | 1.37e-08 | 1 |
islet cell tumor | 1.59e-08 | 1 |
endocrine pancreas cancer | 1.59e-08 | 1 |
pancreatic endocrine carcinoma | 1.59e-08 | 1 |
respiratory system cancer | 2.20e-07 | 16 |