FFCP PHASE1:Hg19::chr1:201437567..201437585,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23612 | |EntrezGene=23612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8934 | |HGNC=8934 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=123bp_to_ENST00000485436_5end | |association_with_transcript=123bp_to_ENST00000485436_5end | ||
|cluster_id=chr1:201437567..201437585,- | |||
|description=CAGE_peak_9_at_PHLDA3_5end | |description=CAGE_peak_9_at_PHLDA3_5end | ||
|id=chr1:201437567..201437585,- | |id=chr1:201437567..201437585,- | ||
|ontology_enrichment_celltype=CL:0000136!4.40e-11!15;CL:0000680!4.85e-07!57;CL:0000056!4.85e-07!57;CL:0000355!4.85e-07!57;CL:0000183!5.86e-07!59 | |ontology_enrichment_celltype=CL:0000136!4.40e-11!15;CL:0000680!4.85e-07!57;CL:0000056!4.85e-07!57;CL:0000355!4.85e-07!57;CL:0000183!5.86e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.20e-30;13!CL:0002615;2.31e-11;3!CL:0002521;2.56e-11;3!CL:0002621;9.81e-11;3!CL:0000244;1.70e-08;4!CL:0000731;1.70e-08;4!CL:0002617;5.00e-08;2!CL:0002593;7.82e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.20e-25,15;CL:0002521,1.21e-11,3;CL:0002615,2.87e-11,3;CL:0002621,9.12e-11,3;CL:0000244,1.23e-08,4;CL:0000731,1.23e-08,4;CL:0002617,5.59e-08,2;CL:0002593,1.11e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;9.81e-11;3!DOID:127;9.81e-11;3!DOID:0060072;3.75e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.48e-11,3;DOID:127,4.48e-11,3;DOID:0060072,2.10e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002100!1.88e-09!216;UBERON:0005256!8.11e-09!143;UBERON:0000486!2.42e-08!82;UBERON:0000914!4.70e-07!83;UBERON:0002329!4.70e-07!83;UBERON:0003077!4.70e-07!83;UBERON:0003059!4.70e-07!83;UBERON:0007282!4.70e-07!83;UBERON:0009618!4.70e-07!83;UBERON:0007285!4.70e-07!83 | |ontology_enrichment_uberon=UBERON:0002100!1.88e-09!216;UBERON:0005256!8.11e-09!143;UBERON:0000486!2.42e-08!82;UBERON:0000914!4.70e-07!83;UBERON:0002329!4.70e-07!83;UBERON:0003077!4.70e-07!83;UBERON:0003059!4.70e-07!83;UBERON:0007282!4.70e-07!83;UBERON:0009618!4.70e-07!83;UBERON:0007285!4.70e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.99e-13;12!UBERON:0002190;2.56e-11;3!UBERON:0001949;9.81e-11;3!UBERON:0003688;1.68e-09;6!UBERON:0002358;1.68e-09;6!UBERON:0003684;1.68e-09;6!UBERON:0001178;1.68e-09;6!UBERON:0004457;2.32e-09;9!UBERON:0000042;2.32e-09;9!UBERON:0001013;2.23e-08;14!UBERON:0002456;7.82e-08;2!UBERON:0002072;6.18e-07;5!UBERON:0000365;7.26e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.21e-11,3;UBERON:0001949,9.12e-11,3;UBERON:0003688,1.64e-09,6;UBERON:0002358,1.64e-09,6;UBERON:0003684,1.64e-09,6;UBERON:0001178,1.64e-09,6;UBERON:0001013,1.68e-08,14;UBERON:0002456,1.11e-07,2;UBERON:0002072,3.99e-07,5;UBERON:0000365,5.63e-07,5;UBERON:0004457,5.77e-07,12;UBERON:0000042,5.77e-07,12 | |||
|phase1_expression=1.2717486548939,7.06531728840244,1.26858963686374,3.00219895059391,6.70441641640932,0.872338524100369,10.1319951267324,1.89515962028049,2.87304191019822,0,1.39560233594486,0.655324116390517,0,0,0.662794751455832,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.434539556882471,0.795285947051099,0.973269740605272,0,0,0,0.130979075497713,1.09288586487763,0.370784442784429,0,0.348259474598534,0.531831842075461,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0.132409180813219,0,0.709336764396714,0,1.06748995729705,0.74000264525148,0,0,0,0,0,0,0.936480230490962,0.570471821544449,0.747243402759005,0,0.161872944368132,0,0.408308342509787,0,0.206651562351531,0,0,0,0.718618141816238,0,0,0.277064115484183,0,1.83892677479412,0,0.340296549480063,0,0,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.10075209822764,0.339121184620975,2.51239109112286,1.36373060295417,1.43402297694502,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0.709840800239063,0.337169380156203,0,0.330881918197182,0,0,0.269662616320329,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0,0,0.658501712451753,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0,0,1.8720341211139,0.297262324577456,4.68669169933885,0.671928512795438,0.992425680696705,0.447792613514241,0,0,0,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0,0.517086863031111,7.15312891703765,0,1.06375246633948,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.868687840005475,1.02738161275192,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,0.831883446123229,0.356857977594324,0.315404830067869,0.35142424497814,0.601892199455438,0,3.10419213877515,0,0.368738337083406,0.260650843404249,0.391602314925481,0.686286847621712,0,0,0,0.909382714338778,1.66435439510497,0,0.248107807818777,0.306923946576125,0,0.768834895534206,1.53512174720011,0.64341568457443,1.48418066444991,0.154209693802656,0.710246901252508,0.328508624055237,0,0.348631135379878,0,1.80455823272956,1.10497186723076,0.459257792658427,0.182091168006717,0.917870904715969,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0,0,0,0.512900250232778,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0.386682873168488,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.534192213880424,3.47098322258054,1.15314040419064,0.127612712494584,0.30347334256665,0,0,0,0.616067160352178,1.06461206063404,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.767693373934002,0.855877976067841,0.636406495851874,0,0.359744915166629,0.274537029736055,0.353437207037059,0.606547444719948,3.17020642346017,0,0,1.21856744815642,2.11300293513511,0,0.707027159768564,1.13008116620243,0.551365343546124,0,0,2.31510213706675,0,0,0.30982349809975,1.97186921772569,0.143411352204052,0.196498082026242,0.7133421029625,0,1.47775344708365,0.329294892959902,0,0,0.769776901804097,0,6.53345909167936,0.282431402330337,3.01353760869861,0,2.21715076768338,1.83778720165568,0,0,0,0,0,0,0,0,0.213648142254946,2.88743956579008,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.586032717087576,0,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,2.17499872630438,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0.0769502585037971,0.227884111694002,0.23056390438806,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.252746318513952,0.901940516486955,0,0,0,0,0,0,0.693373365065693,0.173559738335131,0.195984794828755,0.0870592065804026,0.52418000472609,0.343972064943233,0.290268993867255,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.640358984218058,0,0.144090417154106,0,0,0,0.124252535565433,0.235694034616795,0.271808412147228,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,1.27134268827375,2.71499800876856,1.72844298240254,1.63293680054705,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0.496166021811951,0,0,0.638341257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|phase1_expression=1.2717486548939,7.06531728840244,1.26858963686374,3.00219895059391,6.70441641640932,0.872338524100369,10.1319951267324,1.89515962028049,2.87304191019822,0,1.39560233594486,0.655324116390517,0,0,0.662794751455832,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.434539556882471,0.795285947051099,0.973269740605272,0,0,0,0.130979075497713,1.09288586487763,0.370784442784429,0,0.348259474598534,0.531831842075461,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0.132409180813219,0,0.709336764396714,0,1.06748995729705,0.74000264525148,0,0,0,0,0,0,0.936480230490962,0.570471821544449,0.747243402759005,0,0.161872944368132,0,0.408308342509787,0,0.206651562351531,0,0,0,0.718618141816238,0,0,0.277064115484183,0,1.83892677479412,0,0.340296549480063,0,0,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.10075209822764,0.339121184620975,2.51239109112286,1.36373060295417,1.43402297694502,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0.709840800239063,0.337169380156203,0,0.330881918197182,0,0,0.269662616320329,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0,0,0.658501712451753,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0,0,1.8720341211139,0.297262324577456,4.68669169933885,0.671928512795438,0.992425680696705,0.447792613514241,0,0,0,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0,0.517086863031111,7.15312891703765,0,1.06375246633948,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.868687840005475,1.02738161275192,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,0.831883446123229,0.356857977594324,0.315404830067869,0.35142424497814,0.601892199455438,0,3.10419213877515,0,0.368738337083406,0.260650843404249,0.391602314925481,0.686286847621712,0,0,0,0.909382714338778,1.66435439510497,0,0.248107807818777,0.306923946576125,0,0.768834895534206,1.53512174720011,0.64341568457443,1.48418066444991,0.154209693802656,0.710246901252508,0.328508624055237,0,0.348631135379878,0,1.80455823272956,1.10497186723076,0.459257792658427,0.182091168006717,0.917870904715969,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0,0,0,0.512900250232778,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0.386682873168488,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.534192213880424,3.47098322258054,1.15314040419064,0.127612712494584,0.30347334256665,0,0,0,0.616067160352178,1.06461206063404,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.767693373934002,0.855877976067841,0.636406495851874,0,0.359744915166629,0.274537029736055,0.353437207037059,0.606547444719948,3.17020642346017,0,0,1.21856744815642,2.11300293513511,0,0.707027159768564,1.13008116620243,0.551365343546124,0,0,2.31510213706675,0,0,0.30982349809975,1.97186921772569,0.143411352204052,0.196498082026242,0.7133421029625,0,1.47775344708365,0.329294892959902,0,0,0.769776901804097,0,6.53345909167936,0.282431402330337,3.01353760869861,0,2.21715076768338,1.83778720165568,0,0,0,0,0,0,0,0,0.213648142254946,2.88743956579008,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.586032717087576,0,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,2.17499872630438,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0.0769502585037971,0.227884111694002,0.23056390438806,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.252746318513952,0.901940516486955,0,0,0,0,0,0,0.693373365065693,0.173559738335131,0.195984794828755,0.0870592065804026,0.52418000472609,0.343972064943233,0.290268993867255,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.640358984218058,0,0.144090417154106,0,0,0,0.124252535565433,0.235694034616795,0.271808412147228,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,1.27134268827375,2.71499800876856,1.72844298240254,1.63293680054705,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0.496166021811951,0,0,0.638341257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| ||
|short_description=p9@PHLDA3 | |short_description=p9@PHLDA3 | ||
}} | }} |
Latest revision as of 18:00, 19 September 2015
Short description: | p9@PHLDA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PHLDA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 123bp_to_ENST00000485436_5end |
EntrezGene: | PHLDA3 |
HGNC: | 8934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.20e-25 | 15 |
subcutaneous fat cell | 1.21e-11 | 3 |
adipocyte of omentum tissue | 2.87e-11 | 3 |
gingival epithelial cell | 9.12e-11 | 3 |
transitional epithelial cell | 1.23e-08 | 4 |
urothelial cell | 1.23e-08 | 4 |
adipocyte of breast | 5.59e-08 | 2 |
smooth muscle cell of the internal thoracic artery | 1.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.21e-11 | 3 |
gingival epithelium | 9.12e-11 | 3 |
omentum | 1.64e-09 | 6 |
peritoneum | 1.64e-09 | 6 |
abdominal cavity | 1.64e-09 | 6 |
visceral peritoneum | 1.64e-09 | 6 |
adipose tissue | 1.68e-08 | 14 |
internal thoracic artery | 1.11e-07 | 2 |
hypodermis | 3.99e-07 | 5 |
urothelium | 5.63e-07 | 5 |
cavity lining | 5.77e-07 | 12 |
serous membrane | 5.77e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.48e-11 | 3 |
leiomyoma | 4.48e-11 | 3 |
benign neoplasm | 2.10e-08 | 4 |