FFCP PHASE1:Hg19::chr1:160287068..160287094,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=474338 | |EntrezGene=474338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33150 | |HGNC=33150 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_NR_002190,uc001fvw.2_5end | |association_with_transcript=13bp_to_NR_002190,uc001fvw.2_5end | ||
|cluster_id=chr1:160287068..160287094,+ | |||
|coexpression_cluster_id=C248 | |||
|description=CAGE_peak_1_at_SUMO1P3_5end | |description=CAGE_peak_1_at_SUMO1P3_5end | ||
|id=chr1:160287068..160287094,+ | |id=chr1:160287068..160287094,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.66e-18!42;CL:0000860!1.36e-17!45;CL:0000839!9.70e-17!70;CL:0000557!6.36e-16!71;CL:0000766!1.41e-15!76;CL:0000763!2.67e-15!112;CL:0000049!2.67e-15!112;CL:0002009!6.83e-15!65;CL:0002194!5.58e-14!63;CL:0000576!5.58e-14!63;CL:0000040!5.58e-14!63;CL:0000559!5.58e-14!63;CL:0000738!7.43e-14!140;CL:0002031!8.08e-14!124;CL:0000037!2.91e-13!172;CL:0000566!2.91e-13!172;CL:0002032!2.91e-13!165;CL:0000837!2.91e-13!165;CL:0000988!1.63e-11!182;CL:0002087!1.54e-09!119 | |ontology_enrichment_celltype=CL:0002057!2.66e-18!42;CL:0000860!1.36e-17!45;CL:0000839!9.70e-17!70;CL:0000557!6.36e-16!71;CL:0000766!1.41e-15!76;CL:0000763!2.67e-15!112;CL:0000049!2.67e-15!112;CL:0002009!6.83e-15!65;CL:0002194!5.58e-14!63;CL:0000576!5.58e-14!63;CL:0000040!5.58e-14!63;CL:0000559!5.58e-14!63;CL:0000738!7.43e-14!140;CL:0002031!8.08e-14!124;CL:0000037!2.91e-13!172;CL:0000566!2.91e-13!172;CL:0002032!2.91e-13!165;CL:0000837!2.91e-13!165;CL:0000988!1.63e-11!182;CL:0002087!1.54e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-24;33!CL:0002057;1.27e-24;33!CL:0000473;8.00e-20;39!CL:0000234;8.00e-20;39!CL:0000576;2.26e-15;48!CL:0000766;7.85e-12;69!CL:0000763;7.43e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.00e-29,42;CL:0002057,2.00e-29,42;CL:0000473,5.23e-29,48;CL:0000234,5.23e-29,48;CL:0000839,4.11e-24,66;CL:0000557,3.42e-23,67;CL:0000766,1.74e-22,72;CL:0002009,5.84e-22,61;CL:0000763,6.94e-22,108;CL:0000049,6.94e-22,108;CL:0002194,2.03e-20,59;CL:0000576,2.03e-20,59;CL:0000040,2.03e-20,59;CL:0000559,2.03e-20,59;CL:0000738,1.28e-18,136;CL:0002031,9.50e-18,120;CL:0000037,1.33e-17,168;CL:0002032,2.33e-17,161;CL:0000837,2.33e-17,161;CL:0000988,3.59e-16,177;CL:0002087,1.14e-12,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.97e-21;42!CL:0000049;2.03e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.61e-16!80;UBERON:0001474!2.69e-15!86;UBERON:0004765!1.28e-14!101;UBERON:0001434!1.28e-14!101;UBERON:0002405!7.02e-11!115;UBERON:0002390!1.26e-09!102;UBERON:0003061!1.26e-09!102;UBERON:0002193!2.20e-08!112;UBERON:0002204!2.58e-07!167;UBERON:0001737!3.02e-07!9 | |ontology_enrichment_uberon=UBERON:0002371!9.61e-16!80;UBERON:0001474!2.69e-15!86;UBERON:0004765!1.28e-14!101;UBERON:0001434!1.28e-14!101;UBERON:0002405!7.02e-11!115;UBERON:0002390!1.26e-09!102;UBERON:0003061!1.26e-09!102;UBERON:0002193!2.20e-08!112;UBERON:0002204!2.58e-07!167;UBERON:0001737!3.02e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.33e-11;9!UBERON:0001557;2.33e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.49e-22,76;UBERON:0004765,2.72e-19,90;UBERON:0001474,3.96e-19,82;UBERON:0002405,1.03e-17,93;UBERON:0001434,8.69e-16,100;UBERON:0002390,2.41e-14,98;UBERON:0003061,2.41e-14,98;UBERON:0002193,3.79e-13,108;UBERON:0001737,2.26e-11,9;UBERON:0002204,2.27e-09,167 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,27.5653310045228,18.0808358407193,27.0214733443328,14.6379839637152,0,0,0,0,0.410623275218653,0,0.534893840235659,0.164201178899891,0.472264687882075,1.96682138424452,0.767658796194425,10.6823125088092,0,0,0,0.154934401160603,0.142169232487422,3.52320527201817,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,7.99690313287606,7.935394817465,9.46077838632483,7.67015821788759,9.45686142450199,11.4591357231188,10.6446185159196,10.5025889676931,10.6417003449863,5.86067657252252,9.03678557017357,10.8341189275473,9.22387463758763,13.0994952027766,12.8092386133698,11.0190201253525,6.73950956859797,5.11469700639233,9.56568770541477,8.97586459297343,3.83602275479425,9.86711411337186,9.07816359505824,9.34233373493363,7.28621129244555,5.73631210262222,10.4250645458456,8.47559303686716,12.5214396235772,12.6584954976354,11.8302960334687,13.1814665978327,11.5312255029607,7.63834691796167,11.7137976416375,10.7686143087044,5.70025487482497,12.7306673407418,15.1611247624646,1.75996244461323,2.18455444504853,0.889509253863555,2.56038133539904,5.20514783146816,4.59801951963587,2.64417949113945,3.81621501814146,0,0,0,3.96513985737078,3.92355994087075,9.2184429671277,0,0,0,15.7155305667237,4.23698946623668,6.15482147455153,7.79306913631645,11.9209188867136,10.0166008541445,11.0766947291811,12.1861738694257,9.09448370052294,8.45385759139208,6.57751618414705,5.52700035571697,9.27369874352168,8.45233410023744,8.56130649887082,9.40819714244791,11.4442436124542,4.59864592322305,4.81078423675682,12.1449452169361,1.91139248594458,0.651083453856419,0,4.36667845325541,6.01537072425766,0,3.31488152861624,3.28451198768419,0.403213486449465,0,0,0,0,17.3893084107201,0,0,0.289693037921647,0,0,0,0.221729397462564,0.351339142772504,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0.238490624305342,1.14398982156026,4.45749001595478,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,9.22462922052443,3.87780264148325,0,0,0.12663051166458,4.50191214764944,0.286836620748814,0,0,0,0,0,0,0,0,0,0.234321431833797,0.624320153660641,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0,5.90717162844432,0.0974370051611986,0,0,19.0742347046198,0,0.302256294682921,0,0,0,0.286804595389004,0.243947412259191,0.397589304964456,0,0.10366105501537,17.4101387104184,17.8838905947157,0,0,0,0.928735856063958,0,13.4869752045422,17.7013924582007,17.8348162113777,12.6838068642253,17.2124760833001,14.4735077657769,13.6179621241766,17.2674889310305,15.3898862778556,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.245976877086227,17.3283488401511,0,0,0.201057944823262,0,0,0,0,16.1143262915357,11.858278117818,0.288732895522148,6.01881166349594,10.0834700684337,0,0,0,0,0.148631162288728,2.81201501960331,20.6618017684597,24.95241711466,0.0895585227028483,0.290633938513962,0,0.492663237895943,5.72314821085969,7.25648404392702,5.04419836959365,4.54472760334968,11.6201146554669,0,0,0,0.205654985406647,9.61097785100536,16.5779330925735,0.112131084345361,0,0.1466765716419,0.258543431515556,0,5.071816515336,0.531876233169741,0,0,0,0.266422179016099,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,3.48613383440118,0.199945982364114,4.86495122564762,14.0631985600995,10.5416969741516,0,1.14861935834114,32.8064881593652,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0,11.4828975297569,0,0,0,0.24538298343828,0,0.271265023699736,12.2702808303176,10.7057393278297,10.7237642223076,9.13703036943163,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,5.37116906508219,0,0.128139149255701,0,0,0,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,17.9793098849666,15.9475625125189,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0,0.0852266274161009,0,0.165284915360978,0,3.44554323735377,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0.578775534266688,11.1502107847928,0,0,0,16.63571685567,18.667317792493,0,0,0.422215270595328,0.658589785919804,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0.399158742865633,4.21311814291207,0.211673582723883,15.2572311929041,0.280797178113459,0,0.156679895773023,5.01268954180134,12.0197162239138,0.1605880751037,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0.2784061738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| ||
|short_description=p1@SUMO1P3 | |short_description=p1@SUMO1P3 | ||
}} | }} |
Latest revision as of 02:02, 18 September 2015
Short description: | p1@SUMO1P3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SUMO1P3_5end |
Coexpression cluster: | C248_iPS_Aortic_Hep2_amygdala_acute_medial_Myoblast |
Association with transcript: | 13bp_to_NR_002190, uc001fvw.2_5end |
EntrezGene: | SUMO1P3 |
HGNC: | 33150 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.00e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.00e-29 | 42 |
defensive cell | 5.23e-29 | 48 |
phagocyte | 5.23e-29 | 48 |
myeloid lineage restricted progenitor cell | 4.11e-24 | 66 |
granulocyte monocyte progenitor cell | 3.42e-23 | 67 |
myeloid leukocyte | 1.74e-22 | 72 |
macrophage dendritic cell progenitor | 5.84e-22 | 61 |
myeloid cell | 6.94e-22 | 108 |
common myeloid progenitor | 6.94e-22 | 108 |
monopoietic cell | 2.03e-20 | 59 |
monocyte | 2.03e-20 | 59 |
monoblast | 2.03e-20 | 59 |
promonocyte | 2.03e-20 | 59 |
leukocyte | 1.28e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 9.50e-18 | 120 |
hematopoietic stem cell | 1.33e-17 | 168 |
hematopoietic oligopotent progenitor cell | 2.33e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.33e-17 | 161 |
hematopoietic cell | 3.59e-16 | 177 |
nongranular leukocyte | 1.14e-12 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.49e-22 | 76 |
skeletal element | 2.72e-19 | 90 |
bone element | 3.96e-19 | 82 |
immune system | 1.03e-17 | 93 |
skeletal system | 8.69e-16 | 100 |
hematopoietic system | 2.41e-14 | 98 |
blood island | 2.41e-14 | 98 |
hemolymphoid system | 3.79e-13 | 108 |
larynx | 2.26e-11 | 9 |
musculoskeletal system | 2.27e-09 | 167 |