FFCP PHASE1:Hg19::chr19:5690297..5690316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25873 | |EntrezGene=25873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13631 | |HGNC=13631 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3U8 | |UniProt=Q9Y3U8 | ||
|association_with_transcript=25bp_to_ENST00000347512,NM_033643,uc002mcv.2_5end | |association_with_transcript=25bp_to_ENST00000347512,NM_033643,uc002mcv.2_5end | ||
|cluster_id=chr19:5690297..5690316,+ | |||
|coexpression_cluster_id=C884 | |||
|description=CAGE_peak_1_at_RPL36_5end | |description=CAGE_peak_1_at_RPL36_5end | ||
|id=chr19:5690297..5690316,+ | |id=chr19:5690297..5690316,+ | ||
|ontology_enrichment_celltype=CL:0000003!2.84e-15!722;CL:0000012!1.87e-14!682;CL:0000144!1.40e-13!625;CL:0000548!2.92e-13!679;CL:0000004!2.92e-13!679;CL:0000255!2.92e-13!679;CL:0002371!8.72e-12!591;CL:0000183!3.21e-09!59;CL:0000838!2.78e-08!52;CL:0000542!3.89e-08!53;CL:0000051!3.89e-08!53;CL:0000393!1.25e-07!60;CL:0000211!1.25e-07!60;CL:0000222!2.26e-07!119;CL:0000187!2.43e-07!54;CL:0000220!5.17e-07!246;CL:0002321!6.82e-07!248 | |ontology_enrichment_celltype=CL:0000003!2.84e-15!722;CL:0000012!1.87e-14!682;CL:0000144!1.40e-13!625;CL:0000548!2.92e-13!679;CL:0000004!2.92e-13!679;CL:0000255!2.92e-13!679;CL:0002371!8.72e-12!591;CL:0000183!3.21e-09!59;CL:0000838!2.78e-08!52;CL:0000542!3.89e-08!53;CL:0000051!3.89e-08!53;CL:0000393!1.25e-07!60;CL:0000211!1.25e-07!60;CL:0000222!2.26e-07!119;CL:0000187!2.43e-07!54;CL:0000220!5.17e-07!246;CL:0002321!6.82e-07!248 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.78e-08,52;CL:0000542,3.89e-08,53;CL:0000051,3.89e-08,53;CL:0000393,5.57e-08,61;CL:0000211,5.57e-08,61;CL:0000222,6.33e-08,121;CL:0000187,1.07e-07,55;CL:0002321,2.49e-07,250;CL:0000680,7.74e-07,58;CL:0000056,7.74e-07,58;CL:0000355,7.74e-07,58;CL:0000192,9.95e-07,43;CL:0000514,9.95e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.80e-09,78;UBERON:0002329,5.54e-07,71;UBERON:0003059,5.54e-07,71;UBERON:0007282,5.54e-07,71;UBERON:0004290,5.54e-07,71;UBERON:0009618,5.54e-07,71 | |||
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2337511,584.716929961097 | ||
|short_description=p1@RPL36 | |short_description=p1@RPL36 | ||
}} | }} |
Latest revision as of 04:16, 20 September 2015
Short description: | p1@RPL36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL36_5end |
Coexpression cluster: | C884_Mesenchymal_Alveolar_Smooth_Renal_Pericytes_Fibroblast_Hepatic |
Association with transcript: | 25bp_to_ENST00000347512, NM_033643, uc002mcv.2_5end |
EntrezGene: | RPL36 |
HGNC: | 13631 |
UniProt: | Q9Y3U8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.78e-08 | 52 |
lymphocyte | 3.89e-08 | 53 |
common lymphoid progenitor | 3.89e-08 | 53 |
electrically responsive cell | 5.57e-08 | 61 |
electrically active cell | 5.57e-08 | 61 |
mesodermal cell | 6.33e-08 | 121 |
muscle cell | 1.07e-07 | 55 |
embryonic cell | 2.49e-07 | 250 |
muscle precursor cell | 7.74e-07 | 58 |
myoblast | 7.74e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.74e-07 | 58 |
smooth muscle cell | 9.95e-07 | 43 |
smooth muscle myoblast | 9.95e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.80e-09 | 78 |
somite | 5.54e-07 | 71 |
presomitic mesoderm | 5.54e-07 | 71 |
presumptive segmental plate | 5.54e-07 | 71 |
dermomyotome | 5.54e-07 | 71 |
trunk paraxial mesoderm | 5.54e-07 | 71 |