FFCP PHASE1:Hg19::chr19:54704718..54704735,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6203 | |EntrezGene=6203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10442 | |HGNC=10442 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3C0,A9C4C1,P46781 | |UniProt=F2Z3C0,A9C4C1,P46781 | ||
|association_with_transcript=0bp_to_ENST00000448962,NM_001013,uc002qdx.2,uc002qdy.2_5end | |association_with_transcript=0bp_to_ENST00000448962,NM_001013,uc002qdx.2,uc002qdy.2_5end | ||
|cluster_id=chr19:54704718..54704735,+ | |||
|coexpression_cluster_id=C884 | |||
|description=CAGE_peak_1_at_RPS9_5end | |description=CAGE_peak_1_at_RPS9_5end | ||
|id=chr19:54704718..54704735,+ | |id=chr19:54704718..54704735,+ | ||
|ontology_enrichment_celltype=CL:0002371!4.85e-28!591;CL:0000144!9.03e-28!625;CL:0000003!9.29e-25!722;CL:0000012!2.04e-23!682;CL:0000548!1.44e-21!679;CL:0000004!1.44e-21!679;CL:0000255!1.44e-21!679;CL:0000034!5.48e-19!444;CL:0000048!2.19e-17!430;CL:0000723!5.48e-17!436;CL:0000183!1.06e-11!59;CL:0002057!3.96e-11!42;CL:0002320!5.60e-11!365;CL:0000393!1.29e-09!60;CL:0000211!1.29e-09!60;CL:0000187!1.47e-09!54;CL:0000134!1.63e-09!358;CL:0000063!3.12e-09!578;CL:0000860!6.96e-09!45;CL:0000192!1.26e-08!42;CL:0000514!1.26e-08!42;CL:0000680!1.30e-08!57;CL:0000056!1.30e-08!57;CL:0000355!1.30e-08!57;CL:0000222!3.00e-08!119;CL:0000219!7.72e-08!390;CL:0002087!8.42e-08!119;CL:0000988!3.65e-07!182;CL:0002031!5.33e-07!124;CL:0000359!9.00e-07!32 | |ontology_enrichment_celltype=CL:0002371!4.85e-28!591;CL:0000144!9.03e-28!625;CL:0000003!9.29e-25!722;CL:0000012!2.04e-23!682;CL:0000548!1.44e-21!679;CL:0000004!1.44e-21!679;CL:0000255!1.44e-21!679;CL:0000034!5.48e-19!444;CL:0000048!2.19e-17!430;CL:0000723!5.48e-17!436;CL:0000183!1.06e-11!59;CL:0002057!3.96e-11!42;CL:0002320!5.60e-11!365;CL:0000393!1.29e-09!60;CL:0000211!1.29e-09!60;CL:0000187!1.47e-09!54;CL:0000134!1.63e-09!358;CL:0000063!3.12e-09!578;CL:0000860!6.96e-09!45;CL:0000192!1.26e-08!42;CL:0000514!1.26e-08!42;CL:0000680!1.30e-08!57;CL:0000056!1.30e-08!57;CL:0000355!1.30e-08!57;CL:0000222!3.00e-08!119;CL:0000219!7.72e-08!390;CL:0002087!8.42e-08!119;CL:0000988!3.65e-07!182;CL:0002031!5.33e-07!124;CL:0000359!9.00e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.35e-08;33!CL:0002057;8.35e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,8.50e-20,441;CL:0000048,3.64e-18,427;CL:0000723,9.39e-18,433;CL:0002320,1.56e-11,361;CL:0000860,3.96e-11,42;CL:0002057,3.96e-11,42;CL:0000134,4.99e-10,354;CL:0000393,1.20e-09,61;CL:0000211,1.20e-09,61;CL:0000187,1.39e-09,55;CL:0002087,3.08e-09,115;CL:0000680,1.20e-08,58;CL:0000056,1.20e-08,58;CL:0000355,1.20e-08,58;CL:0000192,1.22e-08,43;CL:0000514,1.22e-08,43;CL:0000222,1.34e-08,121;CL:0002031,2.63e-08,120;CL:0000473,2.68e-08,48;CL:0000234,2.68e-08,48;CL:0000219,2.80e-08,386;CL:0000988,5.41e-08,177;CL:0000037,1.55e-07,168;CL:0000738,2.24e-07,136;CL:0002032,5.26e-07,161;CL:0000837,5.26e-07,161;CL:0000359,9.00e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;2.71e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.46e-11!216;UBERON:0002384!5.38e-10!375;UBERON:0004290!5.91e-10!70;UBERON:0000486!9.82e-09!82;UBERON:0000914!1.60e-08!83;UBERON:0002329!1.60e-08!83;UBERON:0003077!1.60e-08!83;UBERON:0003059!1.60e-08!83;UBERON:0007282!1.60e-08!83;UBERON:0009618!1.60e-08!83;UBERON:0007285!1.60e-08!83;UBERON:0002049!2.60e-08!79;UBERON:0007798!2.60e-08!79;UBERON:0004535!2.81e-08!110;UBERON:0001134!4.59e-08!61;UBERON:0002036!4.59e-08!61;UBERON:0003082!4.59e-08!61;UBERON:0002204!5.75e-08!167;UBERON:0000055!1.73e-07!69;UBERON:0001009!2.54e-07!113;UBERON:0002385!3.01e-07!63;UBERON:0001015!3.01e-07!63;UBERON:0000383!3.01e-07!63;UBERON:0001981!3.30e-07!60;UBERON:0007500!3.30e-07!60;UBERON:0004537!3.30e-07!60;UBERON:0006965!3.30e-07!60;UBERON:0001637!4.18e-07!42;UBERON:0003509!4.18e-07!42;UBERON:0004572!4.18e-07!42;UBERON:0004872!7.33e-07!84 | |ontology_enrichment_uberon=UBERON:0003081!3.46e-11!216;UBERON:0002384!5.38e-10!375;UBERON:0004290!5.91e-10!70;UBERON:0000486!9.82e-09!82;UBERON:0000914!1.60e-08!83;UBERON:0002329!1.60e-08!83;UBERON:0003077!1.60e-08!83;UBERON:0003059!1.60e-08!83;UBERON:0007282!1.60e-08!83;UBERON:0009618!1.60e-08!83;UBERON:0007285!1.60e-08!83;UBERON:0002049!2.60e-08!79;UBERON:0007798!2.60e-08!79;UBERON:0004535!2.81e-08!110;UBERON:0001134!4.59e-08!61;UBERON:0002036!4.59e-08!61;UBERON:0003082!4.59e-08!61;UBERON:0002204!5.75e-08!167;UBERON:0000055!1.73e-07!69;UBERON:0001009!2.54e-07!113;UBERON:0002385!3.01e-07!63;UBERON:0001015!3.01e-07!63;UBERON:0000383!3.01e-07!63;UBERON:0001981!3.30e-07!60;UBERON:0007500!3.30e-07!60;UBERON:0004537!3.30e-07!60;UBERON:0006965!3.30e-07!60;UBERON:0001637!4.18e-07!42;UBERON:0003509!4.18e-07!42;UBERON:0004572!4.18e-07!42;UBERON:0004872!7.33e-07!84 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p1@RPS9 | |short_description=p1@RPS9 | ||
}} | }} |
Latest revision as of 21:30, 19 September 2015
Short description: | p1@RPS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS9_5end |
Coexpression cluster: | C884_Mesenchymal_Alveolar_Smooth_Renal_Pericytes_Fibroblast_Hepatic |
Association with transcript: | 0bp_to_ENST00000448962, NM_001013, uc002qdx.2, uc002qdy.2_5end |
EntrezGene: | RPS9 |
HGNC: | 10442 |
UniProt: | F2Z3C0A9C4C1P46781 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 8.50e-20 | 441 |
multi fate stem cell | 3.64e-18 | 427 |
somatic stem cell | 9.39e-18 | 433 |
connective tissue cell | 1.56e-11 | 361 |
classical monocyte | 3.96e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.96e-11 | 42 |
mesenchymal cell | 4.99e-10 | 354 |
electrically responsive cell | 1.20e-09 | 61 |
electrically active cell | 1.20e-09 | 61 |
muscle cell | 1.39e-09 | 55 |
nongranular leukocyte | 3.08e-09 | 115 |
muscle precursor cell | 1.20e-08 | 58 |
myoblast | 1.20e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.20e-08 | 58 |
smooth muscle cell | 1.22e-08 | 43 |
smooth muscle myoblast | 1.22e-08 | 43 |
mesodermal cell | 1.34e-08 | 121 |
hematopoietic lineage restricted progenitor cell | 2.63e-08 | 120 |
defensive cell | 2.68e-08 | 48 |
phagocyte | 2.68e-08 | 48 |
motile cell | 2.80e-08 | 386 |
hematopoietic cell | 5.41e-08 | 177 |
hematopoietic stem cell | 1.55e-07 | 168 |
leukocyte | 2.24e-07 | 136 |
hematopoietic oligopotent progenitor cell | 5.26e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.26e-07 | 161 |
vascular associated smooth muscle cell | 9.00e-07 | 32 |