FFCP PHASE1:Hg19::chr19:39900924..39900973,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39900924..39900973,+ | |||
|coexpression_cluster_id=C3787 | |||
|description=CAGE_peak_at_chr19:39900924..39900973,+ | |description=CAGE_peak_at_chr19:39900924..39900973,+ | ||
|id=chr19:39900924..39900973,+ | |id=chr19:39900924..39900973,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.45e-25!140;CL:0002087!2.62e-20!119;CL:0000037!5.95e-20!172;CL:0000566!5.95e-20!172;CL:0002032!8.92e-20!165;CL:0000837!8.92e-20!165;CL:0002031!1.81e-19!124;CL:0002057!3.03e-19!42;CL:0000988!5.31e-19!182;CL:0000860!3.10e-18!45;CL:0000766!2.62e-16!76;CL:0000557!2.01e-12!71;CL:0000763!1.11e-11!112;CL:0000049!1.11e-11!112;CL:0002009!1.46e-11!65;CL:0000839!2.71e-11!70;CL:0002194!7.29e-11!63;CL:0000576!7.29e-11!63;CL:0000040!7.29e-11!63;CL:0000559!7.29e-11!63;CL:0000542!2.63e-08!53;CL:0000051!2.63e-08!53;CL:0000838!5.54e-08!52 | |ontology_enrichment_celltype=CL:0000738!1.45e-25!140;CL:0002087!2.62e-20!119;CL:0000037!5.95e-20!172;CL:0000566!5.95e-20!172;CL:0002032!8.92e-20!165;CL:0000837!8.92e-20!165;CL:0002031!1.81e-19!124;CL:0002057!3.03e-19!42;CL:0000988!5.31e-19!182;CL:0000860!3.10e-18!45;CL:0000766!2.62e-16!76;CL:0000557!2.01e-12!71;CL:0000763!1.11e-11!112;CL:0000049!1.11e-11!112;CL:0002009!1.46e-11!65;CL:0000839!2.71e-11!70;CL:0002194!7.29e-11!63;CL:0000576!7.29e-11!63;CL:0000040!7.29e-11!63;CL:0000559!7.29e-11!63;CL:0000542!2.63e-08!53;CL:0000051!2.63e-08!53;CL:0000838!5.54e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.19e-21;33!CL:0002057;3.19e-21;33!CL:0000576;8.75e-19;48!CL:0000766;1.65e-17;69!CL:0000473;3.50e-16;39!CL:0000234;3.50e-16;39!CL:0002393;3.41e-10;6!CL:0002397;3.41e-10;6!CL:0000094;3.50e-10;8!CL:0000738;5.66e-09;136!CL:0002087;1.09e-08;104!CL:0000623;2.90e-08;3!CL:0000226;4.92e-08;3!CL:0000842;4.92e-08;3!CL:0000775;7.99e-08;3!CL:0000763;2.09e-07;100!CL:0000081;3.61e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.02e-35,136;CL:0000766,5.08e-34,72;CL:0000860,5.38e-34,42;CL:0002057,5.38e-34,42;CL:0000473,1.07e-28,48;CL:0000234,1.07e-28,48;CL:0000037,2.79e-27,168;CL:0002087,6.12e-27,115;CL:0002031,1.15e-26,120;CL:0000557,1.47e-26,67;CL:0000988,4.02e-25,177;CL:0000839,4.47e-25,66;CL:0002032,6.31e-25,161;CL:0000837,6.31e-25,161;CL:0002009,5.71e-24,61;CL:0002194,5.09e-23,59;CL:0000576,5.09e-23,59;CL:0000040,5.09e-23,59;CL:0000559,5.09e-23,59;CL:0000763,7.15e-22,108;CL:0000049,7.15e-22,108;CL:0002393,4.97e-12,9;CL:0002397,4.97e-12,9;CL:0002320,2.27e-11,361;CL:0000134,2.79e-11,354;CL:0000094,2.60e-10,8;CL:0000219,6.63e-09,386;CL:0000623,3.04e-08,3;CL:0000825,3.04e-08,3;CL:0000226,3.85e-08,3;CL:0000842,3.85e-08,3;CL:0000775,5.46e-08,3;CL:0000081,2.93e-07,11;CL:0000048,3.46e-07,427;CL:0000034,6.06e-07,441;CL:0000723,7.05e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.94e-26;42!CL:0000049;7.74e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.47e-13!102;UBERON:0003061!1.47e-13!102;UBERON:0002193!3.13e-11!112;UBERON:0002371!2.21e-10!80;UBERON:0001474!6.66e-10!86;UBERON:0002405!3.27e-08!115;UBERON:0004765!5.29e-08!101;UBERON:0001434!5.29e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!1.47e-13!102;UBERON:0003061!1.47e-13!102;UBERON:0002193!3.13e-11!112;UBERON:0002371!2.21e-10!80;UBERON:0001474!6.66e-10!86;UBERON:0002405!3.27e-08!115;UBERON:0004765!5.29e-08!101;UBERON:0001434!5.29e-08!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.71e-24,76;UBERON:0002390,2.63e-23,98;UBERON:0003061,2.63e-23,98;UBERON:0001474,5.59e-23,82;UBERON:0004765,1.66e-21,90;UBERON:0001434,4.43e-21,100;UBERON:0002405,2.48e-20,93;UBERON:0002193,3.69e-20,108;UBERON:0002384,1.26e-10,371;UBERON:0003081,5.65e-10,203;UBERON:0002204,1.94e-09,167 | |||
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| ||
|short_description=p@chr19:39900924..39900973,+ | |short_description=p@chr19:39900924..39900973,+ | ||
}} | }} |
Latest revision as of 07:39, 26 July 2015
Short description: | p@chr19:39900924..39900973, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39900924..39900973, + |
Coexpression cluster: | C3787_CD14_Eosinophils_Neutrophils_Peripheral_aorta_Natural_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.71e-24 | 76 |
hematopoietic system | 2.63e-23 | 98 |
blood island | 2.63e-23 | 98 |
bone element | 5.59e-23 | 82 |
skeletal element | 1.66e-21 | 90 |
skeletal system | 4.43e-21 | 100 |
immune system | 2.48e-20 | 93 |
hemolymphoid system | 3.69e-20 | 108 |
connective tissue | 1.26e-10 | 371 |
lateral plate mesoderm | 5.65e-10 | 203 |
musculoskeletal system | 1.94e-09 | 167 |