FFCP PHASE1:Hg19::chr19:22361177..22361180,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:22361177..22361180,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr19:22361177..22361180,- | |description=CAGE_peak_at_chr19:22361177..22361180,- | ||
|id=chr19:22361177..22361180,- | |id=chr19:22361177..22361180,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.84e-29;7!CL:0000586;3.84e-29;7!CL:0002097;2.59e-12;2!CL:0000174;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.50e-29,7;CL:0000586,3.50e-29,7;CL:0002097,3.24e-12,2;CL:0000174,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.28e-23;1!UBERON:0009117;1.20e-20;10!UBERON:0005564;1.20e-20;10!UBERON:0003056;1.21e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;9.12e-10;22!DOID:2994;9.12e-10;22!DOID:4556;1.21e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.86e-10,22;DOID:2994,8.86e-10,22;DOID:4556,1.30e-08,3;DOID:305,1.77e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.41e-29!115;UBERON:0002308!2.89e-12!9;UBERON:0000125!2.89e-12!9;UBERON:0002346!1.13e-11!90;UBERON:0001049!4.84e-11!57;UBERON:0005068!4.84e-11!57;UBERON:0006241!4.84e-11!57;UBERON:0007135!4.84e-11!57;UBERON:0003075!2.40e-10!86;UBERON:0007284!2.40e-10!86;UBERON:0002298!2.48e-10!8;UBERON:0005743!5.82e-10!86;UBERON:0001017!1.14e-09!82;UBERON:0000073!1.77e-09!94;UBERON:0001016!1.77e-09!94;UBERON:0002616!2.80e-09!59;UBERON:0000955!4.06e-09!69;UBERON:0006238!4.06e-09!69;UBERON:0006331!2.02e-08!3;UBERON:0009663!2.86e-08!7;UBERON:0000473!3.04e-08!8;UBERON:0003135!3.61e-08!11;UBERON:0002780!9.59e-08!41;UBERON:0001890!9.59e-08!41;UBERON:0006240!9.59e-08!41;UBERON:0000988!1.04e-07!3;UBERON:0003080!1.72e-07!42;UBERON:0000924!2.45e-07!173;UBERON:0006601!2.45e-07!173;UBERON:0002020!5.27e-07!34;UBERON:0003528!5.27e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!2.41e-29!115;UBERON:0002308!2.89e-12!9;UBERON:0000125!2.89e-12!9;UBERON:0002346!1.13e-11!90;UBERON:0001049!4.84e-11!57;UBERON:0005068!4.84e-11!57;UBERON:0006241!4.84e-11!57;UBERON:0007135!4.84e-11!57;UBERON:0003075!2.40e-10!86;UBERON:0007284!2.40e-10!86;UBERON:0002298!2.48e-10!8;UBERON:0005743!5.82e-10!86;UBERON:0001017!1.14e-09!82;UBERON:0000073!1.77e-09!94;UBERON:0001016!1.77e-09!94;UBERON:0002616!2.80e-09!59;UBERON:0000955!4.06e-09!69;UBERON:0006238!4.06e-09!69;UBERON:0006331!2.02e-08!3;UBERON:0009663!2.86e-08!7;UBERON:0000473!3.04e-08!8;UBERON:0003135!3.61e-08!11;UBERON:0002780!9.59e-08!41;UBERON:0001890!9.59e-08!41;UBERON:0006240!9.59e-08!41;UBERON:0000988!1.04e-07!3;UBERON:0003080!1.72e-07!42;UBERON:0000924!2.45e-07!173;UBERON:0006601!2.45e-07!173;UBERON:0002020!5.27e-07!34;UBERON:0003528!5.27e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.32e-25;8!UBERON:0000941;3.28e-23;1!UBERON:0001785;3.28e-23;1!UBERON:0002464;3.28e-23;1!UBERON:0004904;3.28e-23;1!UBERON:0001021;3.28e-23;1!UBERON:0003135;7.67e-19;11!UBERON:0001905;2.59e-12;2!UBERON:0003714;2.59e-12;2!UBERON:0005162;2.59e-12;2!UBERON:0000122;2.59e-12;2!UBERON:0002757;2.59e-12;2!UBERON:0010134;2.59e-12;2!UBERON:0005408;2.59e-12;2!UBERON:0001899;2.59e-12;2!UBERON:0000991;3.35e-10;21!UBERON:0003101;9.12e-10;22!UBERON:0000079;9.12e-10;22!UBERON:0002369;1.21e-08;3!UBERON:0001235;1.21e-08;3!UBERON:0006858;1.21e-08;3!UBERON:0003296;8.61e-07;4!UBERON:0010133;8.61e-07;4!UBERON:0002784;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-25,8;UBERON:0000941,2.10e-23,1;UBERON:0001785,2.10e-23,1;UBERON:0002464,2.10e-23,1;UBERON:0004904,2.10e-23,1;UBERON:0001021,2.10e-23,1;UBERON:0003902,2.10e-23,1;UBERON:0005425,2.10e-23,1;UBERON:0003135,7.22e-19,11;UBERON:0003714,2.07e-12,2;UBERON:0005162,2.07e-12,2;UBERON:0000122,2.07e-12,2;UBERON:0001905,3.62e-12,2;UBERON:0002757,3.62e-12,2;UBERON:0010134,3.62e-12,2;UBERON:0005408,3.62e-12,2;UBERON:0001899,3.62e-12,2;UBERON:0000991,3.25e-10,21;UBERON:0009196,3.25e-10,21;UBERON:0009117,3.25e-10,21;UBERON:0005564,3.25e-10,21;UBERON:0004176,8.86e-10,22;UBERON:0003101,8.86e-10,22;UBERON:0000079,8.86e-10,22;UBERON:0002369,1.40e-08,3;UBERON:0001235,1.40e-08,3;UBERON:0006858,1.40e-08,3;UBERON:0001781,7.70e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44876399560722,0,0,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.769502585037971,0.227884111694002,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.353830258013357,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0.0969890164884194,0,0,0,0.596143835108969,0.189932387867636,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.558564802544508,0.458320848023367,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,1.16160370171347,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.124192805882767,0,0.499921631848426,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15571898244382,0,0,0,0,0.97894681802587,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0.351742488719241,0,0,1.00885116665647,0.606965604236632,0,0.177404740325278,0.115233987555779,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.883352102537187,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0.297046400327086,0,0,0.187967835959707,0,0.0999411559249289,0,0,0,0,0,0.716697915757256,0,0,0,0,0,0,0,0,0,0.253397002022874,5.30341914658305,1.3360870263278,14.3356043274358,0,0.303114792872958,0,0,0.517164979309476,0.213233981900981,0,0,0,0,0.190941474834495,0.606351566874658,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44876399560722,0,0,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.769502585037971,0.227884111694002,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.353830258013357,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0.0969890164884194,0,0,0,0.596143835108969,0.189932387867636,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.558564802544508,0.458320848023367,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,1.16160370171347,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.124192805882767,0,0.499921631848426,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15571898244382,0,0,0,0,0.97894681802587,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0.351742488719241,0,0,1.00885116665647,0.606965604236632,0,0.177404740325278,0.115233987555779,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.883352102537187,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0.297046400327086,0,0,0.187967835959707,0,0.0999411559249289,0,0,0,0,0,0.716697915757256,0,0,0,0,0,0,0,0,0,0.253397002022874,5.30341914658305,1.3360870263278,14.3356043274358,0,0.303114792872958,0,0,0.517164979309476,0.213233981900981,0,0,0,0,0.190941474834495,0.606351566874658,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr19:22361177..22361180,- | |short_description=p@chr19:22361177..22361180,- | ||
}} | }} |
Latest revision as of 05:45, 26 July 2015
Short description: | p@chr19:22361177..22361180, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:22361177..22361180, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.50e-29 | 7 |
germ cell | 3.50e-29 | 7 |
cortical cell of adrenal gland | 3.24e-12 | 2 |
steroid hormone secreting cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-25 | 8 |
cranial nerve II | 2.10e-23 | 1 |
cranial nerve | 2.10e-23 | 1 |
nerve trunk | 2.10e-23 | 1 |
nerve connecting eye with brain | 2.10e-23 | 1 |
nerve | 2.10e-23 | 1 |
retinal neural layer | 2.10e-23 | 1 |
presumptive neural retina | 2.10e-23 | 1 |
male reproductive organ | 7.22e-19 | 11 |
neural tissue | 2.07e-12 | 2 |
multi cell component structure | 2.07e-12 | 2 |
neuron projection bundle | 2.07e-12 | 2 |
pineal body | 3.62e-12 | 2 |
regional part of epithalamus | 3.62e-12 | 2 |
secretory circumventricular organ | 3.62e-12 | 2 |
circumventricular organ | 3.62e-12 | 2 |
epithalamus | 3.62e-12 | 2 |
gonad | 3.25e-10 | 21 |
indifferent external genitalia | 3.25e-10 | 21 |
indifferent gonad | 3.25e-10 | 21 |
gonad primordium | 3.25e-10 | 21 |
external genitalia | 8.86e-10 | 22 |
male organism | 8.86e-10 | 22 |
male reproductive system | 8.86e-10 | 22 |
adrenal gland | 1.40e-08 | 3 |
adrenal cortex | 1.40e-08 | 3 |
adrenal/interrenal gland | 1.40e-08 | 3 |
layer of retina | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.86e-10 | 22 |
germ cell cancer | 8.86e-10 | 22 |
lung large cell carcinoma | 1.30e-08 | 3 |
carcinoma | 1.77e-07 | 106 |