FFCP PHASE1:Hg19::chr19:18220958..18221027,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18220958..18221027,+ | |||
|coexpression_cluster_id=C1387 | |||
|description=CAGE_peak_at_chr19:18220958..18221027,+ | |description=CAGE_peak_at_chr19:18220958..18221027,+ | ||
|id=chr19:18220958..18221027,+ | |id=chr19:18220958..18221027,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.49e-15!76;CL:0002057!6.93e-14!42;CL:0002194!1.33e-13!63;CL:0000576!1.33e-13!63;CL:0000040!1.33e-13!63;CL:0000559!1.33e-13!63;CL:0000839!8.99e-13!70;CL:0002009!1.55e-12!65;CL:0000860!6.14e-12!45;CL:0000557!2.06e-11!71 | |ontology_enrichment_celltype=CL:0000766!2.49e-15!76;CL:0002057!6.93e-14!42;CL:0002194!1.33e-13!63;CL:0000576!1.33e-13!63;CL:0000040!1.33e-13!63;CL:0000559!1.33e-13!63;CL:0000839!8.99e-13!70;CL:0002009!1.55e-12!65;CL:0000860!6.14e-12!45;CL:0000557!2.06e-11!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-09;33!CL:0002057;1.05e-09;33!CL:0000473;2.22e-09;39!CL:0000234;2.22e-09;39!CL:0000576;1.06e-08;48!CL:0000766;7.80e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.02e-16,72;CL:0000473,9.37e-16,48;CL:0000234,9.37e-16,48;CL:0002194,5.88e-15,59;CL:0000576,5.88e-15,59;CL:0000040,5.88e-15,59;CL:0000559,5.88e-15,59;CL:0000860,3.14e-14,42;CL:0002057,3.14e-14,42;CL:0000839,3.93e-14,66;CL:0002009,1.56e-13,61;CL:0000557,1.38e-12,67 | |||
|ontology_enrichment_development_v019=CL:0002057;3.23e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;1.11e-13;22!UBERON:0001950;2.23e-12;20!UBERON:0002780;2.65e-12;41!UBERON:0001890;2.65e-12;41!UBERON:0003528;1.11e-11;34!UBERON:0002020;1.11e-11;34!UBERON:0001893;1.42e-11;34!UBERON:0001869;1.70e-11;32!UBERON:0002791;2.27e-11;32!UBERON:0000956;2.97e-10;25!UBERON:0000203;2.97e-10;25!UBERON:0000073;2.26e-09;53!UBERON:0002616;2.26e-09;53!UBERON:0000955;1.45e-07;68!UBERON:0001017;1.73e-07;75 | |||
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| ||
|short_description=p@chr19:18220958..18221027,+ | |short_description=p@chr19:18220958..18221027,+ | ||
}} | }} |
Latest revision as of 05:00, 26 July 2015
Short description: | p@chr19:18220958..18221027, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18220958..18221027, + |
Coexpression cluster: | C1387_Neutrophils_Eosinophils_Whole_brain_parietal_optic_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.02e-16 | 72 |
defensive cell | 9.37e-16 | 48 |
phagocyte | 9.37e-16 | 48 |
monopoietic cell | 5.88e-15 | 59 |
monocyte | 5.88e-15 | 59 |
monoblast | 5.88e-15 | 59 |
promonocyte | 5.88e-15 | 59 |
classical monocyte | 3.14e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.14e-14 | 42 |
myeloid lineage restricted progenitor cell | 3.93e-14 | 66 |
macrophage dendritic cell progenitor | 1.56e-13 | 61 |
granulocyte monocyte progenitor cell | 1.38e-12 | 67 |