FFCP PHASE1:Hg19::chr17:80006358..80006377,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5986 | |EntrezGene=5986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9974 | |HGNC=9974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=129bp_to_BC080181_5end | |association_with_transcript=129bp_to_BC080181_5end | ||
|cluster_id=chr17:80006358..80006377,- | |||
|description=CAGE_peak_5_at_RFNG_5end | |description=CAGE_peak_5_at_RFNG_5end | ||
|id=chr17:80006358..80006377,- | |id=chr17:80006358..80006377,- | ||
|ontology_enrichment_celltype=CL:0002334!9.62e-07!12 | |ontology_enrichment_celltype=CL:0002334!9.62e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000062;3.77e-09;9!CL:0000346;2.71e-07;3!CL:1000428;2.71e-07;3!CL:0002567;2.71e-07;3!CL:0002231;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.20e-07,11;CL:0000375,1.20e-07,11;CL:0000335,1.20e-07,11;CL:0002567,2.32e-07,3;CL:0000346,2.97e-07,3;CL:1000428,2.97e-07,3;CL:0002231,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.97e-19;1!CL:0000335;1.20e-07;11!UBERON:0003056;2.71e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.97e-19;1!UBERON:0001785;2.97e-19;1!UBERON:0002464;2.97e-19;1!UBERON:0004904;2.97e-19;1!UBERON:0001021;2.97e-19;1!UBERON:0003714;2.60e-10;2!UBERON:0005162;2.60e-10;2!UBERON:0000122;2.60e-10;2!UBERON:0000412;2.71e-07;3!UBERON:0001992;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.25e-19,1;UBERON:0001785,2.25e-19,1;UBERON:0002464,2.25e-19,1;UBERON:0004904,2.25e-19,1;UBERON:0001021,2.25e-19,1;UBERON:0003902,2.25e-19,1;UBERON:0005425,2.25e-19,1;UBERON:0003714,2.27e-10,2;UBERON:0005162,2.27e-10,2;UBERON:0000122,2.27e-10,2;UBERON:0000412,2.97e-07,3;UBERON:0001992,2.97e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0.783556884599516,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0.552700035571697,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0.326923806226917,0.454072282934794,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0.206651562351531,2.37600571456411,0.741800787835671,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,1.28648187638577,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0.829312462163088,0.144119953416961,0.37872730027914,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,1.04007436911366,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.356857977594324,0,0,0,4.5481500811197,4.1389228517002,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0.909382714338778,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.887808626565635,0.164254312027618,0.519254429183621,0.464841513839837,0,1.20303882181971,0.644566922551274,0.229628896329213,0,0.262248829918848,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.580024309752732,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0.10893846351899,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,1.35291077473043,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0.457680136793847,0.151230923763239,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0.252071696221718,0,0,1.42769420259154,0,0,0,0.231051332300676,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0.118920090777569,0.11294608203896,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0.26721740526556,0,0,1.97024615367422,0,0,0.103432995861895,0,0,0.193766729508018,0.124149428591716,0.112131862580613,0.25458863311266,0.202117188958219,0,0,0.0673520530145875,0.215166616178029,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0.783556884599516,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0.552700035571697,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0.326923806226917,0.454072282934794,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0.206651562351531,2.37600571456411,0.741800787835671,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,1.28648187638577,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0.829312462163088,0.144119953416961,0.37872730027914,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,1.04007436911366,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.356857977594324,0,0,0,4.5481500811197,4.1389228517002,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0.909382714338778,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.887808626565635,0.164254312027618,0.519254429183621,0.464841513839837,0,1.20303882181971,0.644566922551274,0.229628896329213,0,0.262248829918848,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.580024309752732,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0.10893846351899,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,1.35291077473043,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0.457680136793847,0.151230923763239,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0.252071696221718,0,0,1.42769420259154,0,0,0,0.231051332300676,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0.118920090777569,0.11294608203896,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0.26721740526556,0,0,1.97024615367422,0,0,0.103432995861895,0,0,0.193766729508018,0.124149428591716,0.112131862580613,0.25458863311266,0.202117188958219,0,0,0.0673520530145875,0.215166616178029,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p5@RFNG | |short_description=p5@RFNG | ||
}} | }} |
Latest revision as of 10:54, 18 September 2015
Short description: | p5@RFNG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RFNG_5end |
Coexpression cluster: | NA |
Association with transcript: | 129bp_to_BC080181_5end |
EntrezGene: | RFNG |
HGNC: | 9974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.20e-07 | 11 |
osteoprogenitor cell | 1.20e-07 | 11 |
mesenchyme condensation cell | 1.20e-07 | 11 |
light melanocyte | 2.32e-07 | 3 |
hair follicle dermal papilla cell | 2.97e-07 | 3 |
stem cell of epidermis | 2.97e-07 | 3 |
epithelial cell of prostate | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.25e-19 | 1 |
cranial nerve | 2.25e-19 | 1 |
nerve trunk | 2.25e-19 | 1 |
nerve connecting eye with brain | 2.25e-19 | 1 |
nerve | 2.25e-19 | 1 |
retinal neural layer | 2.25e-19 | 1 |
presumptive neural retina | 2.25e-19 | 1 |
neural tissue | 2.27e-10 | 2 |
multi cell component structure | 2.27e-10 | 2 |
neuron projection bundle | 2.27e-10 | 2 |
dermal papilla | 2.97e-07 | 3 |
papillary layer of dermis | 2.97e-07 | 3 |