FFCP PHASE1:Hg19::chr17:76413038..76413051,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:76413038..76413051,- | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_at_chr17:76413038..76413051,- | |description=CAGE_peak_at_chr17:76413038..76413051,- | ||
|id=chr17:76413038..76413051,- | |id=chr17:76413038..76413051,- | ||
|ontology_enrichment_celltype=CL:0002057!1.51e-44!42;CL:0000860!6.47e-41!45;CL:0000766!7.68e-35!76;CL:0002194!1.20e-31!63;CL:0000576!1.20e-31!63;CL:0000040!1.20e-31!63;CL:0000559!1.20e-31!63;CL:0002009!2.26e-30!65;CL:0000839!1.68e-27!70;CL:0000557!5.62e-27!71;CL:0000763!5.18e-20!112;CL:0000049!5.18e-20!112;CL:0000738!4.51e-19!140;CL:0002087!1.43e-17!119;CL:0000037!2.66e-13!172;CL:0000566!2.66e-13!172;CL:0002031!2.90e-13!124;CL:0000988!6.13e-12!182;CL:0002032!9.85e-12!165;CL:0000837!9.85e-12!165;CL:0000775!2.05e-08!3;CL:0002393!2.83e-08!9;CL:0002397!2.83e-08!9;CL:0000094!7.64e-08!8;CL:0000842!2.93e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.51e-44!42;CL:0000860!6.47e-41!45;CL:0000766!7.68e-35!76;CL:0002194!1.20e-31!63;CL:0000576!1.20e-31!63;CL:0000040!1.20e-31!63;CL:0000559!1.20e-31!63;CL:0002009!2.26e-30!65;CL:0000839!1.68e-27!70;CL:0000557!5.62e-27!71;CL:0000763!5.18e-20!112;CL:0000049!5.18e-20!112;CL:0000738!4.51e-19!140;CL:0002087!1.43e-17!119;CL:0000037!2.66e-13!172;CL:0000566!2.66e-13!172;CL:0002031!2.90e-13!124;CL:0000988!6.13e-12!182;CL:0002032!9.85e-12!165;CL:0000837!9.85e-12!165;CL:0000775!2.05e-08!3;CL:0002393!2.83e-08!9;CL:0002397!2.83e-08!9;CL:0000094!7.64e-08!8;CL:0000842!2.93e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-27;33!CL:0002057;1.14e-27;33!CL:0000094;3.53e-23;8!CL:0000775;5.61e-23;3!CL:0000473;9.23e-22;39!CL:0000234;9.23e-22;39!CL:0000576;1.25e-18;48!CL:0000081;8.06e-17;11!CL:0000771;5.76e-16;2!CL:0000766;3.98e-14;69!CL:0000763;2.67e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.59e-32,72;CL:0000860,9.67e-31,42;CL:0002057,9.67e-31,42;CL:0000473,1.43e-26,48;CL:0000234,1.43e-26,48;CL:0000094,3.02e-23,8;CL:0000775,4.86e-23,3;CL:0002194,9.86e-21,59;CL:0000576,9.86e-21,59;CL:0000040,9.86e-21,59;CL:0000559,9.86e-21,59;CL:0000763,2.35e-20,108;CL:0000049,2.35e-20,108;CL:0002009,5.59e-20,61;CL:0000839,2.72e-18,66;CL:0000557,5.53e-18,67;CL:0000738,2.37e-17,136;CL:0000081,7.20e-17,11;CL:0000771,5.16e-16,2;CL:0000037,2.42e-13,168;CL:0002032,1.68e-12,161;CL:0000837,1.68e-12,161;CL:0000988,1.78e-12,177;CL:0002087,5.10e-11,115;CL:0002031,5.91e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.55e-22;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.97e-30!102;UBERON:0003061!2.97e-30!102;UBERON:0002193!1.77e-29!112;UBERON:0002371!7.63e-23!80;UBERON:0001474!6.30e-22!86;UBERON:0002405!9.52e-20!115;UBERON:0004765!3.26e-17!101;UBERON:0001434!3.26e-17!101;UBERON:0007023!2.83e-14!115;UBERON:0003081!7.48e-13!216;UBERON:0000178!1.43e-08!15;UBERON:0000179!1.43e-08!15;UBERON:0000463!1.43e-08!15;UBERON:0002204!6.87e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!2.97e-30!102;UBERON:0003061!2.97e-30!102;UBERON:0002193!1.77e-29!112;UBERON:0002371!7.63e-23!80;UBERON:0001474!6.30e-22!86;UBERON:0002405!9.52e-20!115;UBERON:0004765!3.26e-17!101;UBERON:0001434!3.26e-17!101;UBERON:0007023!2.83e-14!115;UBERON:0003081!7.48e-13!216;UBERON:0000178!1.43e-08!15;UBERON:0000179!1.43e-08!15;UBERON:0000463!1.43e-08!15;UBERON:0002204!6.87e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-11;15!UBERON:0000179;1.22e-11;15!UBERON:0000463;1.22e-11;15!UBERON:0000996;2.37e-08;1!UBERON:0002171;2.37e-08;1!UBERON:0006518;2.37e-08;1!UBERON:0008949;2.37e-08;1!UBERON:0000101;2.37e-08;1!UBERON:0002167;2.37e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.38e-22,98;UBERON:0003061,2.38e-22,98;UBERON:0002193,5.71e-20,108;UBERON:0002371,1.42e-15,76;UBERON:0001474,2.95e-14,82;UBERON:0004765,9.02e-13,90;UBERON:0002405,2.80e-12,93;UBERON:0000178,1.38e-11,15;UBERON:0000179,1.38e-11,15;UBERON:0000463,1.38e-11,15;UBERON:0001434,3.02e-11,100;UBERON:0003081,3.47e-10,203;UBERON:0000996,1.98e-08,1;UBERON:0002171,2.84e-08,1;UBERON:0006518,2.84e-08,1;UBERON:0008949,2.84e-08,1;UBERON:0000101,2.84e-08,1;UBERON:0002167,2.84e-08,1 | |||
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| ||
|short_description=p@chr17:76413038..76413051,- | |short_description=p@chr17:76413038..76413051,- | ||
}} | }} |
Latest revision as of 22:01, 25 July 2015
Short description: | p@chr17:76413038..76413051, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76413038..76413051, - |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.59e-32 | 72 |
classical monocyte | 9.67e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.67e-31 | 42 |
defensive cell | 1.43e-26 | 48 |
phagocyte | 1.43e-26 | 48 |
granulocyte | 3.02e-23 | 8 |
neutrophil | 4.86e-23 | 3 |
monopoietic cell | 9.86e-21 | 59 |
monocyte | 9.86e-21 | 59 |
monoblast | 9.86e-21 | 59 |
promonocyte | 9.86e-21 | 59 |
myeloid cell | 2.35e-20 | 108 |
common myeloid progenitor | 2.35e-20 | 108 |
macrophage dendritic cell progenitor | 5.59e-20 | 61 |
myeloid lineage restricted progenitor cell | 2.72e-18 | 66 |
granulocyte monocyte progenitor cell | 5.53e-18 | 67 |
leukocyte | 2.37e-17 | 136 |
blood cell | 7.20e-17 | 11 |
eosinophil | 5.16e-16 | 2 |
hematopoietic stem cell | 2.42e-13 | 168 |
hematopoietic oligopotent progenitor cell | 1.68e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-12 | 161 |
hematopoietic cell | 1.78e-12 | 177 |
nongranular leukocyte | 5.10e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 5.91e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.38e-22 | 98 |
blood island | 2.38e-22 | 98 |
hemolymphoid system | 5.71e-20 | 108 |
bone marrow | 1.42e-15 | 76 |
bone element | 2.95e-14 | 82 |
skeletal element | 9.02e-13 | 90 |
immune system | 2.80e-12 | 93 |
blood | 1.38e-11 | 15 |
haemolymphatic fluid | 1.38e-11 | 15 |
organism substance | 1.38e-11 | 15 |
skeletal system | 3.02e-11 | 100 |
lateral plate mesoderm | 3.47e-10 | 203 |
vagina | 1.98e-08 | 1 |
lower lobe of right lung | 2.84e-08 | 1 |
right lung lobe | 2.84e-08 | 1 |
lower lobe of lung | 2.84e-08 | 1 |
lobe of lung | 2.84e-08 | 1 |
right lung | 2.84e-08 | 1 |