FFCP PHASE1:Hg19::chr17:48764987..48765013,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:48764987..48765013,+
|short_description=p8@ABCC3
|description=CAGE_peak_8_at_ABCC3_5end
|association_with_transcript=213bp_to_ENST00000504586_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8714 | |EntrezGene=8714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=54 | |HGNC=54 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=213bp_to_ENST00000504586_5end | |||
|cluster_id=chr17:48764987..48765013,+ | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_8_at_ABCC3_5end | |||
|id=chr17:48764987..48765013,+ | |||
|ontology_enrichment_celltype=CL:0000128!1.33e-10!7;CL:0000126!1.33e-10!7;CL:0000127!1.33e-10!7;CL:0002453!1.33e-10!7;CL:0000095!1.40e-09!17;CL:0000123!1.40e-09!17;CL:0000243!7.11e-09!15;CL:0000125!7.11e-09!15;CL:0000030!7.11e-09!15;CL:0000339!7.11e-09!15;CL:0002603!1.30e-07!3;CL:0002319!1.73e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002603;1.09e-15;3!CL:0002563;2.08e-12;4!CL:0000243;8.22e-11;15!CL:0000125;8.22e-11;15!CL:0002319;2.98e-10;25!CL:0000095;1.08e-09;17!CL:0000182;9.90e-09;12!CL:0000128;3.10e-07;7!CL:0000126;3.10e-07;7!CL:0000127;3.10e-07;7!CL:0002253;5.41e-07;2!CL:0000047;9.81e-07;2!CL:0002600;9.81e-07;2!CL:0002602;9.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,1.32e-15,3;CL:0002563,1.97e-12,4;CL:0000243,8.99e-11,15;CL:0000125,8.99e-11,15;CL:0000030,8.99e-11,15;CL:0000339,8.99e-11,15;CL:0002319,3.11e-10,25;CL:0000095,1.16e-09,17;CL:0000123,1.16e-09,17;CL:0000223,9.53e-09,58;CL:0000182,1.09e-08,12;CL:0000128,3.35e-07,7;CL:0000126,3.35e-07,7;CL:0000127,3.35e-07,7;CL:0002453,3.35e-07,7;CL:0002253,5.11e-07,2;CL:0002600,8.06e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000339;8.22e-11;15!UBERON:0004161;1.78e-09;11!UBERON:0003104;3.27e-08;31!UBERON:0009497;4.24e-08;13 | |||
|ontology_enrichment_disease=DOID:305!5.76e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;2.08e-12;4!UBERON:0001262;2.08e-12;4!UBERON:0004786;2.08e-12;4!UBERON:0004808;2.08e-12;4!UBERON:0001277;2.08e-12;4!UBERON:0002037;2.66e-08;6!UBERON:0000485;1.84e-07;7!UBERON:0003929;1.84e-07;7!UBERON:0006444;9.81e-07;2!UBERON:0001995;9.81e-07;2!UBERON:0004715;9.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.97e-12,4;UBERON:0001262,1.97e-12,4;UBERON:0004786,1.97e-12,4;UBERON:0004808,1.97e-12,4;UBERON:0001277,1.97e-12,4;UBERON:0002037,2.91e-08,6;UBERON:0006215,2.91e-08,6;UBERON:0003929,4.99e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.11389717664042,0,0,0,0,0,1.10808952269109,0.612002073732759,3.44800193625897,0.286235987131057,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,7.2563178740437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,4.23008073570678,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0,0.640986253728404,0.990113999047056,0,0,0,0,0.924291702687866,0.15350367472613,0,0.537101224341368,0.725083469571143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73632660280006,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,4.38194521445217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,3.41531455235751,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,4.07712618220842,5.85775939349066,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10296455230113,1.15382201733633,1.14586024552114,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0.383830394638891,0,0,3.5597595271665,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0.76872455576384,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,2.55715116387475,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,2.55731135809876,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0.432626562123789,0.126166424835079,0.218531143927391,0.126698501011437,0.203977659483963,0,1.65410819162721,0.250707539292375,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 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| ||
|short_description=p8@ABCC3 | |||
}} | }} |
Latest revision as of 03:45, 16 September 2015
Short description: | p8@ABCC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ABCC3_5end |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | 213bp_to_ENST00000504586_5end |
EntrezGene: | ABCC3 |
HGNC: | 54 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 1.32e-15 | 3 |
intestinal epithelial cell | 1.97e-12 | 4 |
glial cell (sensu Vertebrata) | 8.99e-11 | 15 |
glial cell | 8.99e-11 | 15 |
glioblast | 8.99e-11 | 15 |
glioblast (sensu Vertebrata) | 8.99e-11 | 15 |
neural cell | 3.11e-10 | 25 |
neuron associated cell | 1.16e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.16e-09 | 17 |
endodermal cell | 9.53e-09 | 58 |
hepatocyte | 1.09e-08 | 12 |
oligodendrocyte | 3.35e-07 | 7 |
macroglial cell | 3.35e-07 | 7 |
astrocyte | 3.35e-07 | 7 |
oligodendrocyte precursor cell | 3.35e-07 | 7 |
epithelial cell of large intestine | 5.11e-07 | 2 |
smooth muscle cell of trachea | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.97e-12 | 4 |
wall of intestine | 1.97e-12 | 4 |
gastrointestinal system mucosa | 1.97e-12 | 4 |
gastrointestinal system epithelium | 1.97e-12 | 4 |
intestinal epithelium | 1.97e-12 | 4 |
cerebellum | 2.91e-08 | 6 |
rhombic lip | 2.91e-08 | 6 |
gut epithelium | 4.99e-07 | 54 |