FFCP PHASE1:Hg19::chr17:4872322..4872330,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:4872322..4872330,-
|short_description=p@chr17:4872322..4872330,-
|description=CAGE_peak_at_chr17:4872322..4872330,-
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:4872322..4872330,- | |||
|coexpression_cluster_id=C2420 | |||
|description=CAGE_peak_at_chr17:4872322..4872330,- | |||
|id=chr17:4872322..4872330,- | |||
|ontology_enrichment_celltype=CL:0000055!6.07e-19!180;CL:0000548!2.50e-13!679;CL:0000004!2.50e-13!679;CL:0000255!2.50e-13!679;CL:0000012!6.59e-13!682;CL:0000057!6.12e-12!75;CL:0002334!8.31e-11!12;CL:0000144!3.28e-10!625;CL:0002371!4.00e-10!591;CL:0000003!8.12e-10!722;CL:0000680!6.86e-08!57;CL:0000056!6.86e-08!57;CL:0000355!6.86e-08!57;CL:0000183!2.81e-07!59;CL:0000187!7.16e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.56e-23;12!CL:0002580;8.36e-09;3!CL:0002579;7.06e-08;3!CL:0002582;7.06e-08;3!CL:0000197;3.46e-07;6!CL:0000098;3.46e-07;6!CL:0002167;3.46e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.62e-23,12;CL:0002580,4.35e-09,3;CL:0002579,5.21e-08,3;CL:0002582,1.28e-07,3;CL:0000197,2.54e-07,6;CL:0000098,2.54e-07,6;CL:0002167,2.54e-07,6;CL:0000057,3.22e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.57e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.19e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.32e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.55e-07!61;UBERON:0002036!2.55e-07!61;UBERON:0003082!2.55e-07!61;UBERON:0004290!6.18e-07!70;UBERON:0002385!9.56e-07!63;UBERON:0001015!9.56e-07!63;UBERON:0000383!9.56e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.85e-10;6!UBERON:0002358;5.85e-10;6!UBERON:0003684;5.85e-10;6!UBERON:0001178;5.85e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.08e-10,6;UBERON:0002358,6.08e-10,6;UBERON:0003684,6.08e-10,6;UBERON:0001178,6.08e-10,6 | |||
|phase1_expression=1.09007027562334,0.642301571672949,1.26858963686374,0,1.34088328328186,0,0,0,0,0,1.39560233594486,0.218441372130172,1.05506791291381,0.37129905888014,0,0,0,0,0,0.123121058076788,0.816002764977012,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,1.44575660953827,0,1.44846518960824,0.795285947051099,0.973269740605272,0.472674085820339,0.221729397462564,0.43917392846563,0,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0.379891534993739,4.237093786023,2.0078563452417,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0,0,0,0.70296429550139,0.624320153660641,0,0,0.822041490506354,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.250237039743928,0,1.75591048352335,0,0.150238058906597,0,0.717558542755448,0.213557388818567,0,0.300091096084402,0,1.54584324027377,0.18611685633159,1.5189869901714,0.0974370051611986,0.757301322732344,0.0920498986422993,0.646584227275248,0,0.503760491138201,0.508681776931463,0.386521706326594,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0,0.38474715694639,0,1.40241773803446,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.439001141634502,0,0,0.0925884451585296,0.651616610620649,0,1.44331342025273,0.34779121492523,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0.224262168690721,0,0.2933531432838,1.03417372606222,3.57656445851882,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,1.08524321078289,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,1.67737398844108,0,1.42636905040718,0.289562613335158,0.61642896765115,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,2.9115920614313,3.92543775353756,1.10391690523754,1.99140405487612,0.300946099727719,0,0,1.32845119707087,0.737476674166813,0.173767228936166,0.391602314925481,0,0,0,0,0,0,0,1.73675465473144,4.75732117192994,2.80660094433074,1.79394808957981,1.02341449813341,1.60853921143608,1.48418066444991,0.925258162815933,2.13074070375753,1.88892458831761,1.03850885836724,1.04589340613963,0,0,0.368323955743585,0.34444334449382,0,0,0.451199612907412,0.462092022626489,0.784349769176855,1.46139224653261,0.422206515571503,0,0,0,0,0.812839312631559,0.501689773854853,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0,0,0.082509499920588,0,0,0,2.12675580242668,0.154048617114644,0.307007349452259,0.413509717453592,0.859361958946189,0.290033387828457,0.426133137080504,0.356128142586949,0.826424576804891,0,0.382838137483752,0,2.78907329578371,10.7036197922418,2.7881490806424,1.23213432070436,0.532306030317022,0.869932992075073,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0.767693373934002,0.42793898803392,0.636406495851874,2.35484592059769,0,0.274537029736055,0,0.202182481573316,0,0,0,1.46228093778771,1.05650146756755,0,0.848432591722276,0,3.85955740482287,0,0,0.578775534266688,0,0.405820753925408,0,0,0.430234056612155,0.196498082026242,0.35667105148125,0.709522128141196,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,3.26672954583968,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,1.11308705022906,0,0.211125408127993,0,0,0,0,0,2.79935628895627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.494255755786011,0.104421949505455,0,0,0,0,0,1.45668227720456,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.554698692052555,0,0,0.174118413160805,0,1.37588825977293,0.0967563312890851,0.146178634172371,0.164230914106418,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0.39961921916426,0,0,0,0,0.745515213392595,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0.247247575143499,0.0674035438541849,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.157611414598396,0,2.85120908602398,1.25501137532991,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.328370082997356,1.87426823963964,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0.303298235083296,0,0.470531639396343,0,0,1.64180283175561,0.467426619694449,2.21922344601045,1.51522404220071,0.50313580350515,0,0.915360273587694,0.604923695052956,0.310874401165561,0.443565449968902,1.11507737014592,4.04822800947244,0.465788870628778,0.829412415681711,1.32920857278997,1.04349012362347,1.80309130796662,1.14241563650639,0.406870733204662,0.363697318405119,1.50374779859484,3.71227007902795,1.19428766609585,0,0.343395705182793,1.34699795506368,0,0,0,0.521988583930423,0,0,1.46842022703881,0.895444205407437,0.308801447160972,0.438568099157414,0.530067437837643,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0.567515953566836,1.47284760201473,0.419638523158333,0,0,0.215649622793364,0,0,0,0,0.371807292777007,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,1.90691047733584,7.59395918666111,0,0.0752103283492573,1.41193548092464,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0,0.131545547125698,1.53651993149159,0,0,0,0,0,0.863710364874486,0.47775168788705,0.142953088353313,0,0,0,0,0,0,0,0,2.24830801388074,2.89725576181136,0,0.22910686854405,0.62041277132864,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0.4226557275834,3.90832363781979,0,0.0644578879735772,0,0,1.41157948686277,0,0,0,0,0.157771562193185,0,0,0,0.743990036333503,0,1.29787968637137,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,4.26101077806331,0,0,0,0,0,0,0,0,0.640364075266293,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=1.09007027562334,0.642301571672949,1.26858963686374,0,1.34088328328186,0,0,0,0,0,1.39560233594486,0.218441372130172,1.05506791291381,0.37129905888014,0,0,0,0,0,0.123121058076788,0.816002764977012,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,1.44575660953827,0,1.44846518960824,0.795285947051099,0.973269740605272,0.472674085820339,0.221729397462564,0.43917392846563,0,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0.379891534993739,4.237093786023,2.0078563452417,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0,0,0,0.70296429550139,0.624320153660641,0,0,0.822041490506354,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.250237039743928,0,1.75591048352335,0,0.150238058906597,0,0.717558542755448,0.213557388818567,0,0.300091096084402,0,1.54584324027377,0.18611685633159,1.5189869901714,0.0974370051611986,0.757301322732344,0.0920498986422993,0.646584227275248,0,0.503760491138201,0.508681776931463,0.386521706326594,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0,0.38474715694639,0,1.40241773803446,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.439001141634502,0,0,0.0925884451585296,0.651616610620649,0,1.44331342025273,0.34779121492523,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0.224262168690721,0,0.2933531432838,1.03417372606222,3.57656445851882,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,1.08524321078289,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,1.67737398844108,0,1.42636905040718,0.289562613335158,0.61642896765115,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,2.9115920614313,3.92543775353756,1.10391690523754,1.99140405487612,0.300946099727719,0,0,1.32845119707087,0.737476674166813,0.173767228936166,0.391602314925481,0,0,0,0,0,0,0,1.73675465473144,4.75732117192994,2.80660094433074,1.79394808957981,1.02341449813341,1.60853921143608,1.48418066444991,0.925258162815933,2.13074070375753,1.88892458831761,1.03850885836724,1.04589340613963,0,0,0.368323955743585,0.34444334449382,0,0,0.451199612907412,0.462092022626489,0.784349769176855,1.46139224653261,0.422206515571503,0,0,0,0,0.812839312631559,0.501689773854853,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0,0,0.082509499920588,0,0,0,2.12675580242668,0.154048617114644,0.307007349452259,0.413509717453592,0.859361958946189,0.290033387828457,0.426133137080504,0.356128142586949,0.826424576804891,0,0.382838137483752,0,2.78907329578371,10.7036197922418,2.7881490806424,1.23213432070436,0.532306030317022,0.869932992075073,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0.767693373934002,0.42793898803392,0.636406495851874,2.35484592059769,0,0.274537029736055,0,0.202182481573316,0,0,0,1.46228093778771,1.05650146756755,0,0.848432591722276,0,3.85955740482287,0,0,0.578775534266688,0,0.405820753925408,0,0,0.430234056612155,0.196498082026242,0.35667105148125,0.709522128141196,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,3.26672954583968,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,1.11308705022906,0,0.211125408127993,0,0,0,0,0,2.79935628895627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.494255755786011,0.104421949505455,0,0,0,0,0,1.45668227720456,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.554698692052555,0,0,0.174118413160805,0,1.37588825977293,0.0967563312890851,0.146178634172371,0.164230914106418,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0.39961921916426,0,0,0,0,0.745515213392595,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0.247247575143499,0.0674035438541849,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.157611414598396,0,2.85120908602398,1.25501137532991,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.328370082997356,1.87426823963964,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0.303298235083296,0,0.470531639396343,0,0,1.64180283175561,0.467426619694449,2.21922344601045,1.51522404220071,0.50313580350515,0,0.915360273587694,0.604923695052956,0.310874401165561,0.443565449968902,1.11507737014592,4.04822800947244,0.465788870628778,0.829412415681711,1.32920857278997,1.04349012362347,1.80309130796662,1.14241563650639,0.406870733204662,0.363697318405119,1.50374779859484,3.71227007902795,1.19428766609585,0,0.343395705182793,1.34699795506368,0,0,0,0.521988583930423,0,0,1.46842022703881,0.895444205407437,0.308801447160972,0.438568099157414,0.530067437837643,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0.567515953566836,1.47284760201473,0.419638523158333,0,0,0.215649622793364,0,0,0,0,0.371807292777007,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,1.90691047733584,7.59395918666111,0,0.0752103283492573,1.41193548092464,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0,0.131545547125698,1.53651993149159,0,0,0,0,0,0.863710364874486,0.47775168788705,0.142953088353313,0,0,0,0,0,0,0,0,2.24830801388074,2.89725576181136,0,0.22910686854405,0.62041277132864,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0.4226557275834,3.90832363781979,0,0.0644578879735772,0,0,1.41157948686277,0,0,0,0,0.157771562193185,0,0,0,0.743990036333503,0,1.29787968637137,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,4.26101077806331,0,0,0,0,0,0,0,0,0.640364075266293,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr17:4872322..4872330,- | |||
}} | }} |
Latest revision as of 18:47, 25 July 2015
Short description: | p@chr17:4872322..4872330, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4872322..4872330, - |
Coexpression cluster: | C2420_Smooth_osteosarcoma_Fibroblast_Preadipocyte_mesenchymal_thyroid_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.62e-23 | 12 |
preadipocyte of the breast | 4.35e-09 | 3 |
omentum preadipocyte | 5.21e-08 | 3 |
visceral preadipocyte | 1.28e-07 | 3 |
receptor cell | 2.54e-07 | 6 |
sensory epithelial cell | 2.54e-07 | 6 |
olfactory epithelial cell | 2.54e-07 | 6 |
fibroblast | 3.22e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.08e-10 | 6 |
peritoneum | 6.08e-10 | 6 |
abdominal cavity | 6.08e-10 | 6 |
visceral peritoneum | 6.08e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.32e-13 | 14 |