FFCP PHASE1:Hg19::chr17:73389822..73389833,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2885 | |EntrezGene=2885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4566 | |HGNC=4566 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-85bp_to_ENST00000392563_5end | |association_with_transcript=-85bp_to_ENST00000392563_5end | ||
|cluster_id=chr17:73389822..73389833,- | |||
|description=CAGE_peak_6_at_GRB2_5end | |description=CAGE_peak_6_at_GRB2_5end | ||
|id=chr17:73389822..73389833,- | |id=chr17:73389822..73389833,- | ||
|ontology_enrichment_celltype=CL:0002319!1.29e-07!25 | |ontology_enrichment_celltype=CL:0002319!1.29e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.57e-17;2!CL:0002319;1.28e-13;25!CL:0000540;1.73e-12;6!CL:0000404;1.73e-12;6!CL:0002553;7.96e-10;1!CL:0000511;2.76e-09;1!CL:0002625;2.76e-09;1!CL:0000216;2.76e-09;1!CL:0002591;2.76e-09;1!CL:0000333;1.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.95e-25,8;CL:0002319,1.31e-13,25;CL:0000540,8.46e-13,6;CL:0000031,8.46e-13,6;CL:0000404,8.46e-13,6;CL:0002553,7.98e-10,1;CL:0000511,2.16e-09,1;CL:0002625,2.16e-09,1;CL:0000216,2.16e-09,1;CL:0000133,2.80e-09,59;CL:0002591,4.50e-09,1;CL:0000221,2.04e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.73e-12;6!UBERON:0008425;8.66e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!1.15e-10!173;UBERON:0006601!1.15e-10!173;UBERON:0001017!1.70e-10!82;UBERON:0004121!4.42e-10!169;UBERON:0005743!1.22e-09!86;UBERON:0000073!2.54e-09!94;UBERON:0001016!2.54e-09!94;UBERON:0000483!5.04e-08!309;UBERON:0000119!5.76e-08!312;UBERON:0002346!3.02e-07!90;UBERON:0000468!5.13e-07!659;UBERON:0000033!5.27e-07!123;UBERON:0000153!6.84e-07!129;UBERON:0007811!6.84e-07!129;UBERON:0000922!9.72e-07!612 | |ontology_enrichment_uberon=UBERON:0000924!1.15e-10!173;UBERON:0006601!1.15e-10!173;UBERON:0001017!1.70e-10!82;UBERON:0004121!4.42e-10!169;UBERON:0005743!1.22e-09!86;UBERON:0000073!2.54e-09!94;UBERON:0001016!2.54e-09!94;UBERON:0000483!5.04e-08!309;UBERON:0000119!5.76e-08!312;UBERON:0002346!3.02e-07!90;UBERON:0000468!5.13e-07!659;UBERON:0000033!5.27e-07!123;UBERON:0000153!6.84e-07!129;UBERON:0007811!6.84e-07!129;UBERON:0000922!9.72e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.76e-09;1!UBERON:0001343;2.76e-09;1!UBERON:0004910;2.76e-09;1!UBERON:0004813;2.76e-09;1!UBERON:0000013;1.36e-07;5!UBERON:0002410;1.36e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.79e-10,89;UBERON:0001136,2.16e-09,1;UBERON:0001343,2.16e-09,1;UBERON:0004910,2.16e-09,1;UBERON:0005154,2.16e-09,1;UBERON:0005295,2.16e-09,1;UBERON:0004813,2.16e-09,1;UBERON:0005297,2.16e-09,1;UBERON:0005294,2.16e-09,1;UBERON:0010141,2.16e-09,1;UBERON:0005891,2.16e-09,1;UBERON:0001017,5.04e-08,81;UBERON:0004121,1.20e-07,171;UBERON:0000924,1.20e-07,171;UBERON:0006601,1.20e-07,171;UBERON:0000013,1.46e-07,5;UBERON:0002410,1.46e-07,5;UBERON:0011216,3.75e-07,223 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,1.14494394852423,0.410623275218653,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0.989553900560148,0.598390972864896,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.130979075497713,0.728590576585084,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0.838998872419812,0,0.626984899610432,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0.505008341862199,0,0.554128230968366,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0.389748020644795,0,0,0.161646056818812,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0.286804595389004,0.365921118388786,0.795178609928912,0.464775771478074,0.207322110030741,0.504641701751257,0.72995471815166,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0.110293972732394,0.435758888184812,0.237270619111097,0,0.196221465125346,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0.658501712451753,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.2933531432838,0,0,0,0.26593811658487,0,0.514414748524284,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0,0,0,0,0.128343036279748,1.01637849688985,1.30139853857622,0,1.84267891867784,1.91381625495949,0,0,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0,0.40101294060657,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0,0,0.812839312631559,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0.27470839445503,0.82509499920588,0.574265537996172,0,1.6068392984416,0.290012154876366,0,0,0,0,0,0.0852266274161009,1.15741646340759,0,0,0,0,0,0.31481234683064,0,0,0,0,0.55597265731176,0.143124886741991,0.372158369359667,0,0,0.511795582622668,0,0,1.56989728039846,0,0,0.235624804691373,0.808729926293264,0,0.421258456238981,0,0,0,0,0.565621727814851,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.282431402330337,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0,0,0.503865495708552,0.306806047506464,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,3.14855999986305,0,0,0.508507300585533,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0.295547618953547,0.438770794307945,0,0,0,0.113942055847001,0.23056390438806,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.649165919226273,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0.189559738885464,0.300646838828985,0.414752765588989,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.316553979779393,0,0,0.213452994739353,0,0.144090417154106,0.229073192331831,0,0,0.124252535565433,0,0.407712618220842,0.418411385249333,0.305994652908965,0,0,0.273810757783986,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0.720599767084807,0,0.157566364614447,0.412079291905832,0.337017719270924,0.0984274815147488,0,0,0.136203406111576,0.321506296930038,0.550157746388935,1.66176135211674,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,1.017074150619,0.542999601753713,0,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| ||
|short_description=p6@GRB2 | |short_description=p6@GRB2 | ||
}} | }} |
Latest revision as of 10:47, 17 September 2015
Short description: | p6@GRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GRB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -85bp_to_ENST00000392563_5end |
EntrezGene: | GRB2 |
HGNC: | 4566 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.95e-25 | 8 |
neural cell | 1.31e-13 | 25 |
neuron | 8.46e-13 | 6 |
neuroblast | 8.46e-13 | 6 |
electrically signaling cell | 8.46e-13 | 6 |
lung fibroblast | 7.98e-10 | 1 |
androgen binding protein secreting cell | 2.16e-09 | 1 |
seminiferous tubule epithelial cell | 2.16e-09 | 1 |
Sertoli cell | 2.16e-09 | 1 |
neurectodermal cell | 2.80e-09 | 59 |
smooth muscle cell of the pulmonary artery | 4.50e-09 | 1 |
ectodermal cell | 2.04e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.79e-10 | 89 |
mesothelium | 2.16e-09 | 1 |
seminiferous tubule of testis | 2.16e-09 | 1 |
epithelium of male gonad | 2.16e-09 | 1 |
epithelial cord | 2.16e-09 | 1 |
sex cord | 2.16e-09 | 1 |
seminiferous tubule epithelium | 2.16e-09 | 1 |
testis sex cord | 2.16e-09 | 1 |
genital ridge | 2.16e-09 | 1 |
primitive sex cord of indifferent gonad | 2.16e-09 | 1 |
coelomic epithelium | 2.16e-09 | 1 |
central nervous system | 5.04e-08 | 81 |
ectoderm-derived structure | 1.20e-07 | 171 |
ectoderm | 1.20e-07 | 171 |
presumptive ectoderm | 1.20e-07 | 171 |
sympathetic nervous system | 1.46e-07 | 5 |
autonomic nervous system | 1.46e-07 | 5 |
organ system subdivision | 3.75e-07 | 223 |