FFCP PHASE1:Hg19::chr17:48545700..48545707,+: Difference between revisions
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|id=chr17:48545700..48545707,+
|short_description=p5@ACSF2
|description=CAGE_peak_5_at_ACSF2_5end
|association_with_transcript=0bp_to_ENST00000506085_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80221 | |EntrezGene=80221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26101 | |HGNC=26101 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000506085_5end | |||
|cluster_id=chr17:48545700..48545707,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_5_at_ACSF2_5end | |||
|id=chr17:48545700..48545707,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!4.16e-30!12;UBERON:0002028!4.16e-30!12;UBERON:0007277!4.16e-30!12;UBERON:0004732!9.05e-28!13;UBERON:0003076!5.00e-24!15;UBERON:0003057!5.00e-24!15;UBERON:0007023!1.54e-22!115;UBERON:0003127!4.70e-21!2;UBERON:0002680!2.10e-18!9;UBERON:0001895!2.10e-18!9;UBERON:0010092!2.10e-18!9;UBERON:0002037!3.69e-16!6;UBERON:0006215!3.69e-16!6;UBERON:0001049!9.26e-16!57;UBERON:0005068!9.26e-16!57;UBERON:0006241!9.26e-16!57;UBERON:0007135!9.26e-16!57;UBERON:0002616!3.45e-15!59;UBERON:0003075!1.03e-14!86;UBERON:0007284!1.03e-14!86;UBERON:0001896!1.62e-14!3;UBERON:0005290!1.62e-14!3;UBERON:0010096!1.62e-14!3;UBERON:0002346!5.49e-14!90;UBERON:0001017!9.65e-13!82;UBERON:0000955!1.29e-12!69;UBERON:0006238!1.29e-12!69;UBERON:0005743!4.35e-12!86;UBERON:0002298!7.15e-12!8;UBERON:0002135!1.45e-11!1;UBERON:0003112!2.42e-11!1;UBERON:0000032!2.42e-11!1;UBERON:0005253!2.42e-11!1;UBERON:0003128!2.42e-11!1;UBERON:0002241!2.42e-11!1;UBERON:0001703!2.42e-11!1;UBERON:0004761!2.42e-11!1;UBERON:0009617!2.42e-11!1;UBERON:0002902!4.91e-11!1;UBERON:0009899!4.91e-11!1;UBERON:0002022!6.00e-11!1;UBERON:0000073!8.17e-11!94;UBERON:0001016!8.17e-11!94;UBERON:0000033!5.25e-08!123;UBERON:0000064!7.09e-08!219;UBERON:0000025!7.92e-08!194;UBERON:0001950!1.32e-07!20;UBERON:0000153!1.46e-07!129;UBERON:0007811!1.46e-07!129;UBERON:0000063!3.10e-07!97;UBERON:0002619!5.85e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.20e-09;53!UBERON:0002616;8.20e-09;53!UBERON:0001016;9.30e-08;83!UBERON:0000955;1.66e-07;68!UBERON:0001017;8.51e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p5@ACSF2 | |||
}} | }} |
Latest revision as of 02:40, 16 September 2015
Short description: | p5@ACSF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACSF2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000506085_5end |
EntrezGene: | ACSF2 |
HGNC: | 26101 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |