FFCP PHASE1:Hg19::chr17:50236706..50236716,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56934 | |EntrezGene=56934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1369 | |HGNC=1369 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS85 | |UniProt=Q9NS85 | ||
|association_with_transcript=444bp_to_ENST00000285273,NM_001082533,uc002itx.3_5end | |association_with_transcript=444bp_to_ENST00000285273,NM_001082533,uc002itx.3_5end | ||
|cluster_id=chr17:50236706..50236716,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_26_at_CA10_5end | |description=CAGE_peak_26_at_CA10_5end | ||
|id=chr17:50236706..50236716,- | |id=chr17:50236706..50236716,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.39e-66;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.28e-71!57;UBERON:0005068!1.28e-71!57;UBERON:0006241!1.28e-71!57;UBERON:0007135!1.28e-71!57;UBERON:0002616!4.59e-69!59;UBERON:0000955!4.60e-62!69;UBERON:0006238!4.60e-62!69;UBERON:0001017!6.82e-60!82;UBERON:0002780!1.31e-59!41;UBERON:0001890!1.31e-59!41;UBERON:0006240!1.31e-59!41;UBERON:0003080!4.02e-58!42;UBERON:0005743!6.24e-57!86;UBERON:0003075!1.05e-53!86;UBERON:0007284!1.05e-53!86;UBERON:0002020!7.24e-53!34;UBERON:0003528!7.24e-53!34;UBERON:0001893!8.21e-53!34;UBERON:0000073!3.70e-51!94;UBERON:0001016!3.70e-51!94;UBERON:0002346!4.08e-51!90;UBERON:0001869!4.71e-50!32;UBERON:0002619!7.26e-50!22;UBERON:0002791!1.52e-48!33;UBERON:0001950!3.18e-47!20;UBERON:0007023!1.36e-45!115;UBERON:0000956!8.69e-44!25;UBERON:0000203!8.69e-44!25;UBERON:0003056!5.34e-39!61;UBERON:0000033!8.68e-36!123;UBERON:0000153!6.63e-34!129;UBERON:0007811!6.63e-34!129;UBERON:0004121!1.67e-26!169;UBERON:0000924!8.89e-26!173;UBERON:0006601!8.89e-26!173;UBERON:0000200!2.70e-25!6;UBERON:0000025!2.82e-19!194;UBERON:0001871!3.08e-19!7;UBERON:0002771!5.11e-19!3;UBERON:0000988!6.94e-19!3;UBERON:0004733!4.64e-18!12;UBERON:0002028!4.64e-18!12;UBERON:0007277!4.64e-18!12;UBERON:0002680!2.94e-17!9;UBERON:0001895!2.94e-17!9;UBERON:0010092!2.94e-17!9;UBERON:0004732!1.25e-16!13;UBERON:0004111!1.75e-14!241;UBERON:0003076!2.42e-14!15;UBERON:0003057!2.42e-14!15;UBERON:0002360!4.33e-13!2;UBERON:0000094!4.33e-13!2;UBERON:0007645!4.33e-13!2;UBERON:0002148!5.88e-13!2;UBERON:0009662!5.88e-13!2;UBERON:0000477!1.59e-12!286;UBERON:0002298!2.97e-12!8;UBERON:0000483!3.03e-12!309;UBERON:0000119!4.51e-12!312;UBERON:0001872!7.76e-12!5;UBERON:0002021!1.00e-11!5;UBERON:0000064!3.35e-11!219;UBERON:0002308!9.71e-11!9;UBERON:0000125!9.71e-11!9;UBERON:0000475!1.85e-09!365;UBERON:0006331!6.22e-09!3;UBERON:0005383!8.92e-09!3;UBERON:0005382!8.92e-09!3;UBERON:0001894!2.89e-08!7;UBERON:0006222!2.89e-08!7;UBERON:0003112!9.10e-08!1;UBERON:0000032!9.10e-08!1;UBERON:0005253!9.10e-08!1;UBERON:0003128!9.10e-08!1;UBERON:0002241!9.10e-08!1;UBERON:0001703!9.10e-08!1;UBERON:0004761!9.10e-08!1;UBERON:0009617!9.10e-08!1;UBERON:0002581!1.25e-07!1;UBERON:0002902!1.33e-07!1;UBERON:0009899!1.33e-07!1;UBERON:0000481!1.50e-07!347;UBERON:0002022!2.21e-07!1;UBERON:0002336!2.50e-07!1;UBERON:0001018!2.50e-07!1;UBERON:0002473!2.50e-07!1;UBERON:0005340!2.50e-07!1;UBERON:0002316!2.50e-07!1;UBERON:0003544!2.50e-07!1;UBERON:0001020!2.50e-07!1;UBERON:0005970!2.50e-07!1;UBERON:0002437!2.50e-07!1;UBERON:0001874!2.83e-07!1;UBERON:0007190!3.40e-07!1;UBERON:0002363!4.90e-07!1;UBERON:0007647!4.90e-07!1;UBERON:0010115!4.90e-07!1;UBERON:0000369!8.69e-07!4;UBERON:0002435!8.69e-07!4;UBERON:0000204!8.69e-07!4;UBERON:0010082!8.69e-07!4 | |ontology_enrichment_uberon=UBERON:0001049!1.28e-71!57;UBERON:0005068!1.28e-71!57;UBERON:0006241!1.28e-71!57;UBERON:0007135!1.28e-71!57;UBERON:0002616!4.59e-69!59;UBERON:0000955!4.60e-62!69;UBERON:0006238!4.60e-62!69;UBERON:0001017!6.82e-60!82;UBERON:0002780!1.31e-59!41;UBERON:0001890!1.31e-59!41;UBERON:0006240!1.31e-59!41;UBERON:0003080!4.02e-58!42;UBERON:0005743!6.24e-57!86;UBERON:0003075!1.05e-53!86;UBERON:0007284!1.05e-53!86;UBERON:0002020!7.24e-53!34;UBERON:0003528!7.24e-53!34;UBERON:0001893!8.21e-53!34;UBERON:0000073!3.70e-51!94;UBERON:0001016!3.70e-51!94;UBERON:0002346!4.08e-51!90;UBERON:0001869!4.71e-50!32;UBERON:0002619!7.26e-50!22;UBERON:0002791!1.52e-48!33;UBERON:0001950!3.18e-47!20;UBERON:0007023!1.36e-45!115;UBERON:0000956!8.69e-44!25;UBERON:0000203!8.69e-44!25;UBERON:0003056!5.34e-39!61;UBERON:0000033!8.68e-36!123;UBERON:0000153!6.63e-34!129;UBERON:0007811!6.63e-34!129;UBERON:0004121!1.67e-26!169;UBERON:0000924!8.89e-26!173;UBERON:0006601!8.89e-26!173;UBERON:0000200!2.70e-25!6;UBERON:0000025!2.82e-19!194;UBERON:0001871!3.08e-19!7;UBERON:0002771!5.11e-19!3;UBERON:0000988!6.94e-19!3;UBERON:0004733!4.64e-18!12;UBERON:0002028!4.64e-18!12;UBERON:0007277!4.64e-18!12;UBERON:0002680!2.94e-17!9;UBERON:0001895!2.94e-17!9;UBERON:0010092!2.94e-17!9;UBERON:0004732!1.25e-16!13;UBERON:0004111!1.75e-14!241;UBERON:0003076!2.42e-14!15;UBERON:0003057!2.42e-14!15;UBERON:0002360!4.33e-13!2;UBERON:0000094!4.33e-13!2;UBERON:0007645!4.33e-13!2;UBERON:0002148!5.88e-13!2;UBERON:0009662!5.88e-13!2;UBERON:0000477!1.59e-12!286;UBERON:0002298!2.97e-12!8;UBERON:0000483!3.03e-12!309;UBERON:0000119!4.51e-12!312;UBERON:0001872!7.76e-12!5;UBERON:0002021!1.00e-11!5;UBERON:0000064!3.35e-11!219;UBERON:0002308!9.71e-11!9;UBERON:0000125!9.71e-11!9;UBERON:0000475!1.85e-09!365;UBERON:0006331!6.22e-09!3;UBERON:0005383!8.92e-09!3;UBERON:0005382!8.92e-09!3;UBERON:0001894!2.89e-08!7;UBERON:0006222!2.89e-08!7;UBERON:0003112!9.10e-08!1;UBERON:0000032!9.10e-08!1;UBERON:0005253!9.10e-08!1;UBERON:0003128!9.10e-08!1;UBERON:0002241!9.10e-08!1;UBERON:0001703!9.10e-08!1;UBERON:0004761!9.10e-08!1;UBERON:0009617!9.10e-08!1;UBERON:0002581!1.25e-07!1;UBERON:0002902!1.33e-07!1;UBERON:0009899!1.33e-07!1;UBERON:0000481!1.50e-07!347;UBERON:0002022!2.21e-07!1;UBERON:0002336!2.50e-07!1;UBERON:0001018!2.50e-07!1;UBERON:0002473!2.50e-07!1;UBERON:0005340!2.50e-07!1;UBERON:0002316!2.50e-07!1;UBERON:0003544!2.50e-07!1;UBERON:0001020!2.50e-07!1;UBERON:0005970!2.50e-07!1;UBERON:0002437!2.50e-07!1;UBERON:0001874!2.83e-07!1;UBERON:0007190!3.40e-07!1;UBERON:0002363!4.90e-07!1;UBERON:0007647!4.90e-07!1;UBERON:0010115!4.90e-07!1;UBERON:0000369!8.69e-07!4;UBERON:0002435!8.69e-07!4;UBERON:0000204!8.69e-07!4;UBERON:0010082!8.69e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.27e-34;6!UBERON:0002680;2.62e-23;9!UBERON:0001895;2.62e-23;9!UBERON:0004733;6.76e-18;12!UBERON:0002028;6.76e-18;12!UBERON:0004732;1.21e-16;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.27e-34,6;UBERON:0006215,4.27e-34,6;UBERON:0002680,2.62e-23,9;UBERON:0001895,2.62e-23,9;UBERON:0010092,2.62e-23,9;UBERON:0004733,6.76e-18,12;UBERON:0002028,6.76e-18,12;UBERON:0007277,6.76e-18,12;UBERON:0004732,1.21e-16,13;UBERON:0003076,1.22e-14,15;UBERON:0003057,1.22e-14,15 | |||
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|short_description=p26@CA10 | |short_description=p26@CA10 | ||
}} | }} |
Latest revision as of 05:51, 16 September 2015
Short description: | p26@CA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_CA10_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 444bp_to_ENST00000285273, NM_001082533, uc002itx.3_5end |
EntrezGene: | CA10 |
HGNC: | 1369 |
UniProt: | Q9NS85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.27e-34 | 6 |
rhombic lip | 4.27e-34 | 6 |
regional part of metencephalon | 2.62e-23 | 9 |
metencephalon | 2.62e-23 | 9 |
future metencephalon | 2.62e-23 | 9 |
segmental subdivision of hindbrain | 6.76e-18 | 12 |
hindbrain | 6.76e-18 | 12 |
presumptive hindbrain | 6.76e-18 | 12 |
segmental subdivision of nervous system | 1.21e-16 | 13 |
posterior neural tube | 1.22e-14 | 15 |
chordal neural plate | 1.22e-14 | 15 |