FFCP PHASE1:Hg19::chr17:4365224..4365234,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:4365224..4365234,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr17:4365224..4365234,+ | |description=CAGE_peak_at_chr17:4365224..4365234,+ | ||
|id=chr17:4365224..4365234,+ | |id=chr17:4365224..4365234,+ | ||
|ontology_enrichment_celltype=CL:0002032!1.68e-11!165;CL:0000837!1.68e-11!165;CL:0000037!9.13e-11!172;CL:0000566!9.13e-11!172;CL:0000988!8.11e-10!182;CL:0000785!1.27e-08!2;CL:0000955!1.27e-08!2;CL:0000818!1.27e-08!2;CL:0000954!1.27e-08!2;CL:0000816!1.27e-08!2;CL:0000763!5.24e-07!112;CL:0000049!5.24e-07!112 | |ontology_enrichment_celltype=CL:0002032!1.68e-11!165;CL:0000837!1.68e-11!165;CL:0000037!9.13e-11!172;CL:0000566!9.13e-11!172;CL:0000988!8.11e-10!182;CL:0000785!1.27e-08!2;CL:0000955!1.27e-08!2;CL:0000818!1.27e-08!2;CL:0000954!1.27e-08!2;CL:0000816!1.27e-08!2;CL:0000763!5.24e-07!112;CL:0000049!5.24e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0002127;8.64e-26;1!CL:0000911;8.64e-26;1!CL:0000814;8.64e-26;1!CL:0000775;1.01e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.26e-25,1;CL:0000914,1.26e-25,1;CL:0000911,1.26e-25,1;CL:0000814,1.26e-25,1;CL:0002042,1.26e-25,1;CL:0002039,1.26e-25,1;CL:0002040,1.26e-25,1;CL:0002041,1.26e-25,1;CL:0000893,1.55e-13,2;CL:0002489,1.55e-13,2;CL:0000809,1.55e-13,2;CL:0000808,1.55e-13,2;CL:0000894,1.55e-13,2;CL:0000806,1.55e-13,2;CL:0000807,1.55e-13,2;CL:0000805,1.55e-13,2;CL:0002425,1.55e-13,2;CL:0000775,1.01e-09,3;CL:0002032,1.73e-07,161;CL:0000837,1.73e-07,161;CL:0000037,3.59e-07,168;CL:0000988,8.41e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002425;1.29e-13;2 | |||
|ontology_enrichment_disease=DOID:2531!3.56e-26!51;DOID:0060083!3.56e-26!51;DOID:1240!2.16e-25!39;DOID:8692!6.26e-19!31;DOID:0050686!2.36e-08!137 | |ontology_enrichment_disease=DOID:2531!3.56e-26!51;DOID:0060083!3.56e-26!51;DOID:1240!2.16e-25!39;DOID:8692!6.26e-19!31;DOID:0050686!2.36e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.03e-16;39!DOID:2531;2.28e-13;51!DOID:0060083;2.28e-13;51!DOID:8692;4.21e-13;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.08e-23,39;DOID:2531,1.51e-17,51;DOID:0060083,1.51e-17,51;DOID:8692,3.17e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002298!1.35e-07!8 | |ontology_enrichment_uberon=UBERON:0002298!1.35e-07!8 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.04e-07,4;UBERON:0005058,2.04e-07,4;UBERON:0009113,2.04e-07,4;UBERON:0003295,2.04e-07,4;UBERON:0005562,2.04e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.387336002901508,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45710687191585,0,0,0,0,0,0,0,0,0.749007023947182,8.97484377612075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77453189058815,0.159426272728822,0,0,1.90506224451495,0,0.842391534340376,0.684704037099577,0.47003968731907,0,0,2.72999727676289,3.02699560786571,0.425846237690326,0.343505344755765,0.614481528616916,0.223676107892416,0.333698283423817,0.586164286206121,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.729819156862664,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97154362503133,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:4365224..4365234,+ | |short_description=p@chr17:4365224..4365234,+ | ||
}} | }} |
Latest revision as of 17:47, 25 July 2015
Short description: | p@chr17:4365224..4365234, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4365224..4365234, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.26e-25 | 1 |
immature NK T cell | 1.26e-25 | 1 |
effector T cell | 1.26e-25 | 1 |
mature NK T cell | 1.26e-25 | 1 |
immature NK T cell stage IV | 1.26e-25 | 1 |
immature NK T cell stage I | 1.26e-25 | 1 |
immature NK T cell stage II | 1.26e-25 | 1 |
immature NK T cell stage III | 1.26e-25 | 1 |
thymocyte | 1.55e-13 | 2 |
double negative thymocyte | 1.55e-13 | 2 |
double-positive, alpha-beta thymocyte | 1.55e-13 | 2 |
DN4 thymocyte | 1.55e-13 | 2 |
DN1 thymic pro-T cell | 1.55e-13 | 2 |
DN2 thymocyte | 1.55e-13 | 2 |
DN3 thymocyte | 1.55e-13 | 2 |
immature single positive thymocyte | 1.55e-13 | 2 |
early T lineage precursor | 1.55e-13 | 2 |
neutrophil | 1.01e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-07 | 161 |
hematopoietic stem cell | 3.59e-07 | 168 |
hematopoietic cell | 8.41e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.04e-07 | 4 |
hemolymphoid system gland | 2.04e-07 | 4 |
thymic region | 2.04e-07 | 4 |
pharyngeal gland | 2.04e-07 | 4 |
thymus primordium | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.08e-23 | 39 |
hematologic cancer | 1.51e-17 | 51 |
immune system cancer | 1.51e-17 | 51 |
myeloid leukemia | 3.17e-13 | 31 |