FFCP PHASE1:Hg19::chr17:48278787..48278869,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:48278787..48278869,+
|short_description=p@chr17:48278787..48278869,+
|description=CAGE_peak_at_chr17:48278787..48278869,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:48278787..48278869,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48278787..48278869,+ | |||
|id=chr17:48278787..48278869,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.95e-34!180;CL:0000057!5.50e-23!75;CL:0000183!1.09e-16!59;CL:0000680!3.05e-16!57;CL:0000056!3.05e-16!57;CL:0000355!3.05e-16!57;CL:0000187!1.74e-15!54;CL:0000393!2.20e-12!60;CL:0000211!2.20e-12!60;CL:0000048!3.62e-12!430;CL:0000723!2.62e-11!436;CL:0000192!6.70e-11!42;CL:0000514!6.70e-11!42;CL:0000034!1.71e-10!444;CL:0002620!2.13e-08!23;CL:0002334!3.29e-08!12;CL:0000359!3.89e-08!32;CL:0000222!7.43e-08!119;CL:0002371!2.07e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.17e-10;12!CL:0000187;1.25e-07;55!CL:0000134;1.72e-07;55!CL:0000057;6.18e-07;73!CL:0002569;7.45e-07;6!CL:0000048;9.07e-07;58!CL:0002570;9.72e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.99e-18,76;CL:0000048,1.34e-12,427;CL:0000723,5.90e-12,433;CL:0000034,3.92e-11,441;CL:0000187,7.57e-11,55;CL:0000680,1.32e-10,58;CL:0000056,1.32e-10,58;CL:0000355,1.32e-10,58;CL:0002334,6.71e-10,12;CL:0000393,6.28e-09,61;CL:0000211,6.28e-09,61;CL:0000192,2.47e-07,43;CL:0000514,2.47e-07,43;CL:0002320,4.64e-07,361;CL:0002570,8.03e-07,8;CL:0002569,9.01e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.13e-19!83;UBERON:0002329!3.13e-19!83;UBERON:0003077!3.13e-19!83;UBERON:0003059!3.13e-19!83;UBERON:0007282!3.13e-19!83;UBERON:0009618!3.13e-19!83;UBERON:0007285!3.13e-19!83;UBERON:0004290!6.85e-18!70;UBERON:0001134!1.65e-16!61;UBERON:0002036!1.65e-16!61;UBERON:0003082!1.65e-16!61;UBERON:0002385!2.00e-15!63;UBERON:0001015!2.00e-15!63;UBERON:0000383!2.00e-15!63;UBERON:0000486!2.66e-14!82;UBERON:0005256!2.74e-13!143;UBERON:0002100!1.34e-09!216;UBERON:0004872!5.56e-08!84;UBERON:0001013!6.57e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.17e-08;9!UBERON:0000042;2.17e-08;9!UBERON:0003104;5.10e-08;7!UBERON:0009142;5.10e-08;7!UBERON:0003688;7.79e-08;6!UBERON:0002358;7.79e-08;6!UBERON:0003684;7.79e-08;6!UBERON:0001178;7.79e-08;6!UBERON:0001013;1.72e-07;14!UBERON:0003422;7.45e-07;6!UBERON:0002384;9.65e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.91e-11,73;UBERON:0001134,2.09e-11,62;UBERON:0002036,2.09e-11,62;UBERON:0003082,2.09e-11,62;UBERON:0007503,3.64e-11,78;UBERON:0002329,4.70e-11,71;UBERON:0003059,4.70e-11,71;UBERON:0007282,4.70e-11,71;UBERON:0004290,4.70e-11,71;UBERON:0009618,4.70e-11,71;UBERON:0003077,9.35e-11,72;UBERON:0007285,9.35e-11,72;UBERON:0002385,9.58e-11,64;UBERON:0001015,9.58e-11,64;UBERON:0000383,9.58e-11,64;UBERON:0000486,1.65e-09,83;UBERON:0003104,2.76e-08,160;UBERON:0009142,2.76e-08,160;UBERON:0005256,5.83e-08,122;UBERON:0002384,9.49e-08,371;UBERON:0003688,9.75e-08,6;UBERON:0002358,9.75e-08,6;UBERON:0003684,9.75e-08,6;UBERON:0001178,9.75e-08,6;UBERON:0001013,1.46e-07,14;UBERON:0003422,9.01e-07,6 | |||
|phase1_expression=5.99538651592837,1.92690471501885,5.07435854745496,27.0197905553452,15.1966772105278,20.9361245784089,12.6649939084155,0,0.522371256399677,0,0,0.218441372130172,3.69273769519835,0.37129905888014,5.63375538737457,0.672325146451775,0,1.46062018077475,0.487932798790507,0.369363174230364,5.50801866359483,7.52291331547411,0,0.136874425072884,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,1.40648818027883,2.1686349143074,4.01070328508712,3.47631645505977,0,12.1658717575659,0.0945348171640679,3.1042115644759,1.40535657109002,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,19.8788780678127,0.633152558322899,0.662045904066094,8.89193524321323,1.77334191099179,3.36406560085384,3.20246987189115,9.12669929143492,0,3.63718814588158,1.30769522490767,1.05950199351452,10.94734256512,0.70296429550139,0.624320153660641,0,1.34503812496621,0.704606991862589,0.323745888736263,0.702254033511242,0.204154171254893,0.245668634623536,0.929932030581889,5.94001428641027,12.3633464639278,0,12.2165084108761,0.336672227908132,0.625592599359821,0,7.02364193409341,11.9530240361618,13.9721394783135,0.226864366320042,3.22901344239952,1.06778694409284,1.27159140695737,11.1033705551229,0.721367704669072,8.75977836155139,1.11670113798954,2.86919764810153,0.876933046450788,4.03894038790583,2.30124746605748,0,10.6502877754984,0.604512589365842,0.67824236924195,0,0,0,0,0,0,0.207322110030741,0,0,4.69348596989448,2.57296375277154,0,0,2.16563844500876,0,0,0,0,0,0,0,0,0,0,8.41450642820675,2.057870056657,17.641045366265,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,2.7003999674239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.448524337381443,1.74384027533312,0.2933531432838,4.13669490424889,0,6.762422020448,2.12750493267896,3.12022310734098,0,1.41849132023278,0.799266537048298,1.71573592389777,4.34097284313154,5.76268235746538,1.95441710576241,2.48774364119782,2.37585561880029,1.20575750823834,0,0.399891964728228,0,0,0,1.19812427745791,17.2292903751171,2.85273810081437,0.579125226670317,1.43833425785268,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,3.00102312635806,3.25518028439683,4.78332981520856,4.81758269752337,4.41566762095017,3.5142424497814,1.50473049863859,0,5.17365356462525,0.664225598535437,7.55913591020983,0.781952530212746,0.783204629850962,10.2943027143257,0,0,0,0.303127571446259,3.32870879020994,6.04780586659361,5.45837177201309,3.06923946576125,18.8042263270159,3.33161788064823,2.04682899626681,15.1202685874991,22.2627099667486,1.23367755042124,6.92490728721196,0.0821271560138091,1.03850885836724,2.90525946149898,0,0,0,0.803701137152247,2.54927635209404,3.40923478894503,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,1.08378575017541,2.00675909541941,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.640986253728404,0.082509499920588,0,0,3.21367859688319,0.096670718292122,1.07834031980251,3.53058451870098,3.03240459465967,0.322260734604821,3.19036726611303,1.10794615640931,1.33548053470106,0.165284915360978,0.576570202095319,0,0.2023155617111,2.78907329578371,9.12955805808856,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.572499546967965,2.232950216158,0.949138274156178,9.53150969619124,0.511795582622668,2.56763392820352,1.27281299170375,3.13979456079692,1.61885211824983,11.8050922786504,5.65499531259295,0.404364963146632,0,1.26377536871694,1.95053495635836,0.974853958525138,1.05650146756755,1.50149902548784,3.67654123079653,0,1.10273068709225,2.65375590096488,1.31535265576129,0,10.4943160327461,1.01455188481352,1.54911749049875,3.66204283291914,0.573645408816206,1.17898849215745,0.7133421029625,0,3.79993743535795,7.90307743103764,0,4.19921664293979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,3.42143546427988,0,0,0,0.197286811273867,0,2.22273980289274,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,1.30815439456455,0,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,1.22206028986725,0,0,0,0,24.0773294189637,0,0,0,0,0,3.62972148145992,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,9.7171718535629,0,0,0,0,0.240476460754601,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29765441419957,0,0.558564802544508,0,0,0.199679000498991,0,0,0.335917362433631,28.8239906833923,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0.5085370753095,0,0,0.653174720218818,0,0,2.72620834856675,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47764408660622,4.44055288709727,3.32883516901568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| ||
|short_description=p@chr17:48278787..48278869,+ | |||
}} | }} |
Latest revision as of 18:39, 25 July 2015
Short description: | p@chr17:48278787..48278869, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48278787..48278869, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.99e-18 | 76 |
multi fate stem cell | 1.34e-12 | 427 |
somatic stem cell | 5.90e-12 | 433 |
stem cell | 3.92e-11 | 441 |
muscle cell | 7.57e-11 | 55 |
muscle precursor cell | 1.32e-10 | 58 |
myoblast | 1.32e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.32e-10 | 58 |
preadipocyte | 6.71e-10 | 12 |
electrically responsive cell | 6.28e-09 | 61 |
electrically active cell | 6.28e-09 | 61 |
smooth muscle cell | 2.47e-07 | 43 |
smooth muscle myoblast | 2.47e-07 | 43 |
connective tissue cell | 4.64e-07 | 361 |
mesenchymal stem cell of adipose | 8.03e-07 | 8 |
mesenchymal stem cell of umbilical cord | 9.01e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.91e-11 | 73 |
skeletal muscle tissue | 2.09e-11 | 62 |
striated muscle tissue | 2.09e-11 | 62 |
myotome | 2.09e-11 | 62 |
epithelial vesicle | 3.64e-11 | 78 |
somite | 4.70e-11 | 71 |
presomitic mesoderm | 4.70e-11 | 71 |
presumptive segmental plate | 4.70e-11 | 71 |
dermomyotome | 4.70e-11 | 71 |
trunk paraxial mesoderm | 4.70e-11 | 71 |
paraxial mesoderm | 9.35e-11 | 72 |
presumptive paraxial mesoderm | 9.35e-11 | 72 |
muscle tissue | 9.58e-11 | 64 |
musculature | 9.58e-11 | 64 |
musculature of body | 9.58e-11 | 64 |
multilaminar epithelium | 1.65e-09 | 83 |
mesenchyme | 2.76e-08 | 160 |
entire embryonic mesenchyme | 2.76e-08 | 160 |
trunk mesenchyme | 5.83e-08 | 122 |
connective tissue | 9.49e-08 | 371 |
omentum | 9.75e-08 | 6 |
peritoneum | 9.75e-08 | 6 |
abdominal cavity | 9.75e-08 | 6 |
visceral peritoneum | 9.75e-08 | 6 |
adipose tissue | 1.46e-07 | 14 |
mesenchyme of umbilical cord | 9.01e-07 | 6 |