FFCP PHASE1:Hg19::chr17:40540377..40540481,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6774 | |EntrezGene=6774 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11364 | |HGNC=11364 | ||
|TSSclassifier=strong | |||
|UniProt=P40763 | |UniProt=P40763 | ||
|association_with_transcript=0bp_to_ENST00000264657,ENST00000389272,ENST00000404395,NM_213662_5end | |association_with_transcript=0bp_to_ENST00000264657,ENST00000389272,ENST00000404395,NM_213662_5end | ||
|cluster_id=chr17:40540377..40540481,- | |||
|description=CAGE_peak_1_at_STAT3_5end | |description=CAGE_peak_1_at_STAT3_5end | ||
|id=chr17:40540377..40540481,- | |id=chr17:40540377..40540481,- | ||
|ontology_enrichment_celltype=CL:0002057!9.07e-15!42;CL:0000766!1.21e-13!76;CL:0000860!9.06e-13!45;CL:0000557!9.07e-11!71;CL:0002009!3.43e-09!65;CL:0000839!5.50e-09!70;CL:0002194!6.69e-09!63;CL:0000576!6.69e-09!63;CL:0000040!6.69e-09!63;CL:0000559!6.69e-09!63;CL:0000738!2.67e-08!140;CL:0000763!6.30e-07!112;CL:0000049!6.30e-07!112 | |ontology_enrichment_celltype=CL:0002057!9.07e-15!42;CL:0000766!1.21e-13!76;CL:0000860!9.06e-13!45;CL:0000557!9.07e-11!71;CL:0002009!3.43e-09!65;CL:0000839!5.50e-09!70;CL:0002194!6.69e-09!63;CL:0000576!6.69e-09!63;CL:0000040!6.69e-09!63;CL:0000559!6.69e-09!63;CL:0000738!2.67e-08!140;CL:0000763!6.30e-07!112;CL:0000049!6.30e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.08e-15;33!CL:0002057;3.08e-15;33!CL:0000473;1.07e-11;39!CL:0000234;1.07e-11;39!CL:0000576;1.36e-08;48!CL:0000766;1.42e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.48e-15,72;CL:0000860,9.07e-15,42;CL:0002057,9.07e-15,42;CL:0000473,9.96e-14,48;CL:0000234,9.96e-14,48;CL:0000557,6.11e-12,67;CL:0002009,2.71e-10,61;CL:0000839,5.22e-10,66;CL:0002194,5.32e-10,59;CL:0000576,5.32e-10,59;CL:0000040,5.32e-10,59;CL:0000559,5.32e-10,59;CL:0000738,6.93e-09,136;CL:0000763,1.61e-07,108;CL:0000049,1.61e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.27e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.14e-16!112;UBERON:0007023!1.00e-14!115;UBERON:0002390!6.65e-14!102;UBERON:0003061!6.65e-14!102;UBERON:0003081!9.13e-13!216;UBERON:0002405!3.80e-12!115;UBERON:0001009!2.45e-09!113;UBERON:0002371!1.35e-08!80;UBERON:0004535!2.96e-08!110;UBERON:0000178!5.29e-08!15;UBERON:0000179!5.29e-08!15;UBERON:0000463!5.29e-08!15;UBERON:0001474!1.76e-07!86 | |ontology_enrichment_uberon=UBERON:0002193!3.14e-16!112;UBERON:0007023!1.00e-14!115;UBERON:0002390!6.65e-14!102;UBERON:0003061!6.65e-14!102;UBERON:0003081!9.13e-13!216;UBERON:0002405!3.80e-12!115;UBERON:0001009!2.45e-09!113;UBERON:0002371!1.35e-08!80;UBERON:0004535!2.96e-08!110;UBERON:0000178!5.29e-08!15;UBERON:0000179!5.29e-08!15;UBERON:0000463!5.29e-08!15;UBERON:0001474!1.76e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.33e-08;15!UBERON:0000179;5.33e-08;15!UBERON:0000463;5.33e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.27e-17,108;UBERON:0002390,5.44e-15,98;UBERON:0003061,5.44e-15,98;UBERON:0007023,1.25e-14,114;UBERON:0003081,1.52e-13,203;UBERON:0002405,8.45e-12,93;UBERON:0002371,1.73e-09,76;UBERON:0001009,3.02e-09,112;UBERON:0004765,1.61e-08,90;UBERON:0000926,1.83e-08,315;UBERON:0004120,1.83e-08,315;UBERON:0006603,1.83e-08,315;UBERON:0001474,3.08e-08,82;UBERON:0004535,3.63e-08,109;UBERON:0000178,5.29e-08,15;UBERON:0000179,5.29e-08,15;UBERON:0000463,5.29e-08,15;UBERON:0001434,7.57e-07,100 | |||
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|short_description=p1@STAT3 | |short_description=p1@STAT3 | ||
}} | }} |
Latest revision as of 14:32, 24 September 2015
Short description: | p1@STAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STAT3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264657, ENST00000389272, ENST00000404395, NM_213662_5end |
EntrezGene: | STAT3 |
HGNC: | 11364 |
UniProt: | P40763 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.48e-15 | 72 |
classical monocyte | 9.07e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.07e-15 | 42 |
defensive cell | 9.96e-14 | 48 |
phagocyte | 9.96e-14 | 48 |
granulocyte monocyte progenitor cell | 6.11e-12 | 67 |
macrophage dendritic cell progenitor | 2.71e-10 | 61 |
myeloid lineage restricted progenitor cell | 5.22e-10 | 66 |
monopoietic cell | 5.32e-10 | 59 |
monocyte | 5.32e-10 | 59 |
monoblast | 5.32e-10 | 59 |
promonocyte | 5.32e-10 | 59 |
leukocyte | 6.93e-09 | 136 |
myeloid cell | 1.61e-07 | 108 |
common myeloid progenitor | 1.61e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.27e-17 | 108 |
hematopoietic system | 5.44e-15 | 98 |
blood island | 5.44e-15 | 98 |
adult organism | 1.25e-14 | 114 |
lateral plate mesoderm | 1.52e-13 | 203 |
immune system | 8.45e-12 | 93 |
bone marrow | 1.73e-09 | 76 |
circulatory system | 3.02e-09 | 112 |
skeletal element | 1.61e-08 | 90 |
mesoderm | 1.83e-08 | 315 |
mesoderm-derived structure | 1.83e-08 | 315 |
presumptive mesoderm | 1.83e-08 | 315 |
bone element | 3.08e-08 | 82 |
cardiovascular system | 3.63e-08 | 109 |
blood | 5.29e-08 | 15 |
haemolymphatic fluid | 5.29e-08 | 15 |
organism substance | 5.29e-08 | 15 |
skeletal system | 7.57e-07 | 100 |