FFCP PHASE1:Hg19::chr17:19648416..19648426,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=218 | |EntrezGene=218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=405 | |HGNC=405 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-335bp_to_ENST00000478057,uc002gwl.1_5end | |association_with_transcript=-335bp_to_ENST00000478057,uc002gwl.1_5end | ||
|cluster_id=chr17:19648416..19648426,- | |||
|description=CAGE_peak_13_at_ALDH3A1_5end | |description=CAGE_peak_13_at_ALDH3A1_5end | ||
|id=chr17:19648416..19648426,- | |id=chr17:19648416..19648426,- | ||
|ontology_enrichment_celltype=CL:0002368!1.88e-11!13;CL:0002602!6.93e-10!2;CL:0002076!4.04e-08!43;CL:0000223!7.34e-08!59;CL:0002328!5.98e-07!3 | |ontology_enrichment_celltype=CL:0002368!1.88e-11!13;CL:0002602!6.93e-10!2;CL:0002076!4.04e-08!43;CL:0000223!7.34e-08!59;CL:0002328!5.98e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002363;3.81e-21;2!CL:0002548;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,3.81e-21,2;CL:0000008,3.81e-21,2;CL:0002548,6.78e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000008;3.81e-21;2!UBERON:0008814;5.69e-21;2!UBERON:0010056;5.69e-21;2 | |||
|ontology_enrichment_disease=DOID:305!9.93e-09!106;DOID:1749!1.71e-07!14 | |ontology_enrichment_disease=DOID:305!9.93e-09!106;DOID:1749!1.71e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:5409;2.53e-11;4!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.53e-11,4;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003566;3.81e-21;2!UBERON:0001777;3.81e-21;2!UBERON:0006562;5.69e-21;2!UBERON:0001723;1.83e-14;3!UBERON:0001033;1.83e-14;3!UBERON:0003891;2.80e-11;4!UBERON:0000964;2.80e-11;4!UBERON:0010409;2.80e-11;4!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,3.81e-21,2;UBERON:0001777,3.81e-21,2;UBERON:0006562,2.33e-15,11;UBERON:0001723,1.60e-14,3;UBERON:0001033,1.60e-14,3;UBERON:0010056,1.60e-14,3;UBERON:0003891,2.80e-11,4;UBERON:0000964,2.80e-11,4;UBERON:0010409,2.80e-11,4;UBERON:0004348,2.80e-11,4;UBERON:0005427,2.80e-11,4;UBERON:0000020,1.23e-07,24;UBERON:0001032,1.23e-07,24;UBERON:0004456,1.23e-07,24 | |||
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| ||
|short_description=p13@ALDH3A1 | |short_description=p13@ALDH3A1 | ||
}} | }} |
Latest revision as of 00:38, 19 September 2015
Short description: | p13@ALDH3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ALDH3A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -335bp_to_ENST00000478057, uc002gwl.1_5end |
EntrezGene: | ALDH3A1 |
HGNC: | 405 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 3.81e-21 | 2 |
migratory cranial neural crest cell | 3.81e-21 | 2 |
cardiac fibroblast | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 3.81e-21 | 2 |
substantia propria of cornea | 3.81e-21 | 2 |
pharynx | 2.33e-15 | 11 |
tongue | 1.60e-14 | 3 |
gustatory system | 1.60e-14 | 3 |
future tongue | 1.60e-14 | 3 |
stroma | 2.80e-11 | 4 |
cornea | 2.80e-11 | 4 |
eye surface | 2.80e-11 | 4 |
optic eminence | 2.80e-11 | 4 |
corneal primordium | 2.80e-11 | 4 |
sense organ | 1.23e-07 | 24 |
sensory system | 1.23e-07 | 24 |
entire sense organ system | 1.23e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.53e-11 | 4 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |