FFCP PHASE1:Hg19::chr17:1012708..1012722,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=B3KW89,Q12979,Q6ZT60 | |UniProt=B3KW89,Q12979,Q6ZT60 | ||
|association_with_transcript=-384bp_to_ENST00000291107,NM_001092,uc002fsg.2_5end | |association_with_transcript=-384bp_to_ENST00000291107,NM_001092,uc002fsg.2_5end | ||
|cluster_id=chr17:1012708..1012722,- | |||
|description=CAGE_peak_6_at_ABR_5end | |description=CAGE_peak_6_at_ABR_5end | ||
|id=chr17:1012708..1012722,- | |id=chr17:1012708..1012722,- | ||
|ontology_enrichment_celltype=CL:0002057!3.94e-12!42;CL:0000860!1.90e-11!45;CL:0002009!3.05e-09!65;CL:0002194!5.49e-09!63;CL:0000576!5.49e-09!63;CL:0000040!5.49e-09!63;CL:0000559!5.49e-09!63;CL:0000766!6.08e-08!76;CL:0000557!1.38e-07!71 | |ontology_enrichment_celltype=CL:0002057!3.94e-12!42;CL:0000860!1.90e-11!45;CL:0002009!3.05e-09!65;CL:0002194!5.49e-09!63;CL:0000576!5.49e-09!63;CL:0000040!5.49e-09!63;CL:0000559!5.49e-09!63;CL:0000766!6.08e-08!76;CL:0000557!1.38e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-09;33!CL:0002057;2.69e-09;33!CL:0000473;1.59e-07;39!CL:0000234;1.59e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.82e-14,48;CL:0000234,4.82e-14,48;CL:0000860,8.37e-14,42;CL:0002057,8.37e-14,42;CL:0002009,3.26e-10,61;CL:0002194,3.72e-10,59;CL:0000576,3.72e-10,59;CL:0000040,3.72e-10,59;CL:0000559,3.72e-10,59;CL:0000766,3.28e-09,72;CL:0000557,6.63e-09,67;CL:0000839,1.10e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;6.46e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.46e-17!625;UBERON:0000480!3.21e-17!626;UBERON:0000468!2.81e-15!659;UBERON:0000062!2.38e-12!511;UBERON:0002050!3.17e-12!605;UBERON:0005423!3.17e-12!605;UBERON:0000923!3.70e-12!604;UBERON:0005291!3.70e-12!604;UBERON:0006598!3.70e-12!604;UBERON:0002532!3.70e-12!604;UBERON:0000922!4.28e-11!612;UBERON:0003081!9.88e-10!216;UBERON:0002204!2.77e-09!167;UBERON:0001474!4.50e-08!86;UBERON:0002371!5.10e-08!80;UBERON:0004765!5.42e-08!101;UBERON:0001434!5.42e-08!101;UBERON:0007023!1.02e-07!115;UBERON:0002390!1.23e-07!102;UBERON:0003061!1.23e-07!102;UBERON:0002193!6.04e-07!112;UBERON:0000153!6.22e-07!129;UBERON:0007811!6.22e-07!129;UBERON:0000033!8.39e-07!123 | |ontology_enrichment_uberon=UBERON:0000467!1.46e-17!625;UBERON:0000480!3.21e-17!626;UBERON:0000468!2.81e-15!659;UBERON:0000062!2.38e-12!511;UBERON:0002050!3.17e-12!605;UBERON:0005423!3.17e-12!605;UBERON:0000923!3.70e-12!604;UBERON:0005291!3.70e-12!604;UBERON:0006598!3.70e-12!604;UBERON:0002532!3.70e-12!604;UBERON:0000922!4.28e-11!612;UBERON:0003081!9.88e-10!216;UBERON:0002204!2.77e-09!167;UBERON:0001474!4.50e-08!86;UBERON:0002371!5.10e-08!80;UBERON:0004765!5.42e-08!101;UBERON:0001434!5.42e-08!101;UBERON:0007023!1.02e-07!115;UBERON:0002390!1.23e-07!102;UBERON:0003061!1.23e-07!102;UBERON:0002193!6.04e-07!112;UBERON:0000153!6.22e-07!129;UBERON:0007811!6.22e-07!129;UBERON:0000033!8.39e-07!123 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.45e-10,203;UBERON:0005423,6.28e-10,581;UBERON:0001474,6.71e-10,82;UBERON:0000922,1.02e-09,592;UBERON:0002371,1.05e-09,76;UBERON:0000923,1.67e-09,560;UBERON:0010316,1.67e-09,560;UBERON:0005291,1.67e-09,560;UBERON:0006598,1.67e-09,560;UBERON:0010317,1.67e-09,560;UBERON:0002532,1.67e-09,560;UBERON:0002050,1.89e-09,564;UBERON:0004765,4.85e-09,90;UBERON:0001434,1.28e-08,100;UBERON:0002204,1.51e-08,167;UBERON:0002390,1.69e-08,98;UBERON:0003061,1.69e-08,98;UBERON:0002193,5.94e-07,108;UBERON:0002405,9.24e-07,93 | |||
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| ||
|short_description=p6@ABR | |short_description=p6@ABR | ||
}} | }} |
Latest revision as of 14:08, 18 September 2015
Short description: | p6@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ABR_5end |
Coexpression cluster: | NA |
Association with transcript: | -384bp_to_ENST00000291107, NM_001092, uc002fsg.2_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | B3KW89Q12979Q6ZT60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.82e-14 | 48 |
phagocyte | 4.82e-14 | 48 |
classical monocyte | 8.37e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.37e-14 | 42 |
macrophage dendritic cell progenitor | 3.26e-10 | 61 |
monopoietic cell | 3.72e-10 | 59 |
monocyte | 3.72e-10 | 59 |
monoblast | 3.72e-10 | 59 |
promonocyte | 3.72e-10 | 59 |
myeloid leukocyte | 3.28e-09 | 72 |
granulocyte monocyte progenitor cell | 6.63e-09 | 67 |
myeloid lineage restricted progenitor cell | 1.10e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.45e-10 | 203 |
developing anatomical structure | 6.28e-10 | 581 |
bone element | 6.71e-10 | 82 |
embryo | 1.02e-09 | 592 |
bone marrow | 1.05e-09 | 76 |
germ layer | 1.67e-09 | 560 |
germ layer / neural crest | 1.67e-09 | 560 |
embryonic tissue | 1.67e-09 | 560 |
presumptive structure | 1.67e-09 | 560 |
germ layer / neural crest derived structure | 1.67e-09 | 560 |
epiblast (generic) | 1.67e-09 | 560 |
embryonic structure | 1.89e-09 | 564 |
skeletal element | 4.85e-09 | 90 |
skeletal system | 1.28e-08 | 100 |
musculoskeletal system | 1.51e-08 | 167 |
hematopoietic system | 1.69e-08 | 98 |
blood island | 1.69e-08 | 98 |
hemolymphoid system | 5.94e-07 | 108 |
immune system | 9.24e-07 | 93 |