FFCP PHASE1:Hg19::chr16:68842398..68842420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=999 | |EntrezGene=999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1748 | |HGNC=1748 | ||
|TSSclassifier=strong | |||
|UniProt=P12830 | |UniProt=P12830 | ||
|association_with_transcript=-32bp_to_X12790_5end | |association_with_transcript=-32bp_to_X12790_5end | ||
|cluster_id=chr16:68842398..68842420,+ | |||
|description=CAGE_peak_2_at_CDH1_5end | |description=CAGE_peak_2_at_CDH1_5end | ||
|id=chr16:68842398..68842420,+ | |id=chr16:68842398..68842420,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.34e-23!254;CL:0002076!2.00e-17!43;CL:0000223!3.14e-16!59;CL:0000039!2.45e-08!7;CL:0000586!2.45e-08!7;CL:0002251!2.80e-08!21;CL:0002077!4.00e-07!33;CL:0002368!4.10e-07!13 | |ontology_enrichment_celltype=CL:0000066!5.34e-23!254;CL:0002076!2.00e-17!43;CL:0000223!3.14e-16!59;CL:0000039!2.45e-08!7;CL:0000586!2.45e-08!7;CL:0002251!2.80e-08!21;CL:0002077!4.00e-07!33;CL:0002368!4.10e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.33e-12;42!CL:0000039;6.28e-11;7!CL:0000586;6.28e-11;7!CL:0002231;1.78e-08;3!CL:0002368;1.29e-07;13!CL:0002541;1.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.93e-16,42;CL:0000223,3.64e-13,58;CL:0000066,2.76e-11,253;CL:0000039,4.70e-11,7;CL:0000586,4.70e-11,7;CL:0002231,1.94e-08,3;CL:0002541,1.10e-07,3;CL:0002368,1.31e-07,13;CL:0002166,8.87e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.92e-08;58 | |||
|ontology_enrichment_disease=DOID:305!5.83e-14!106;DOID:0050687!9.09e-10!143;DOID:299!1.41e-08!25 | |ontology_enrichment_disease=DOID:305!5.83e-14!106;DOID:0050687!9.09e-10!143;DOID:299!1.41e-08!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.03e-20!169;UBERON:0000925!8.03e-20!169;UBERON:0006595!8.03e-20!169;UBERON:0001007!2.13e-15!155;UBERON:0001555!2.13e-15!155;UBERON:0007026!2.13e-15!155;UBERON:0004921!3.31e-13!129;UBERON:0004185!3.31e-13!129;UBERON:0005911!2.71e-12!82;UBERON:0000466!3.01e-12!126;UBERON:0000077!7.45e-12!130;UBERON:0000464!1.92e-11!104;UBERON:0001004!2.52e-09!72;UBERON:0005177!1.60e-08!107;UBERON:0005153!2.84e-08!37;UBERON:0001041!1.07e-07!98;UBERON:0000161!1.16e-07!35;UBERON:0005631!1.23e-07!14;UBERON:0000158!1.23e-07!14;UBERON:0003101!1.33e-07!22;UBERON:0000079!1.33e-07!22;UBERON:0005156!7.98e-07!59;UBERON:0000990!7.98e-07!59;UBERON:0003929!9.40e-07!54 | |ontology_enrichment_uberon=UBERON:0004119!8.03e-20!169;UBERON:0000925!8.03e-20!169;UBERON:0006595!8.03e-20!169;UBERON:0001007!2.13e-15!155;UBERON:0001555!2.13e-15!155;UBERON:0007026!2.13e-15!155;UBERON:0004921!3.31e-13!129;UBERON:0004185!3.31e-13!129;UBERON:0005911!2.71e-12!82;UBERON:0000466!3.01e-12!126;UBERON:0000077!7.45e-12!130;UBERON:0000464!1.92e-11!104;UBERON:0001004!2.52e-09!72;UBERON:0005177!1.60e-08!107;UBERON:0005153!2.84e-08!37;UBERON:0001041!1.07e-07!98;UBERON:0000161!1.16e-07!35;UBERON:0005631!1.23e-07!14;UBERON:0000158!1.23e-07!14;UBERON:0003101!1.33e-07!22;UBERON:0000079!1.33e-07!22;UBERON:0005156!7.98e-07!59;UBERON:0000990!7.98e-07!59;UBERON:0003929!9.40e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.33e-07;3!UBERON:0000920;1.33e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.15e-10,160;UBERON:0000925,5.15e-10,160;UBERON:0006595,5.15e-10,160;UBERON:0000920,1.10e-07,3;UBERON:0001007,2.32e-07,145;UBERON:0001555,2.32e-07,145;UBERON:0007026,2.32e-07,145;UBERON:0005911,6.15e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,2.79120467188971,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51239109112286,1.09098448236334,0.573609190778008,1.58565817968474,0.530119073285941,2.20768491452085,0.829288440122964,3.02785021050754,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0,0,3.44367627920718,0,2.96325770603289,0,1.3068766413512,1.66659201285353,0,0,0,0,0,0,0,0,6.3216351836742,5.15091697256924,0,0,0,1.87467667973554,1.51183915378974,1.41775097242386,0.806026704325635,0.581267877027924,0.766765358330422,0,0,0,0.144119953416961,0,0.507983154337352,0.381988425558278,0,0,0.308482478109971,2.10240140490742,3.14409075893636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0,5.07609688284813,12.0303882181971,6.07734526976916,0,0,0,0,0.770153371044148,0,1.46139224653261,0.422206515571503,0,0,0,0,0,0,0.764628819135115,0,0,0.219259876645935,0,0,0,0,1.13345112812495,0,0,0,4.55042172225565,0,0,0,0,0,0,0,0,0,3.96683796866347,6.1500821556834,0.382838137483752,3.13589120652205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,2.01090682660736,0,1.22386941009813,0,1.68471475667626,2.21715076768338,0.689170200620878,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.14870036263921,0.890894042497916,3.07160702099232,0,0.281338832821026,0,0,0,0,1.38141957765574,0.251932747854276,0,0,0,0.269605053441981,1.79021174675609,0,0.493217028184668,0,0,0,0,0,10.9379659655798,0,0,0.796554137998498,2.54253650292766,1.18193840883968,0,0,0,0,0.120596438625408,0,0,0,0,0,0.975966209950223,0.923403102045565,0,1.84451123510448,6.91133861955245,2.7161842980502,2.87101043758728,2.47313502185028,3.73124343213044,0,0,0,0,0,0,0,0.476809736941136,0.210998064528027,0.652931232636591,1.27217764290547,0,0,1.68069372556344,1.83309043480088,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0.853828638089378,0,11.2813829917835,0.195984794828755,0.0870592065804026,1.04836000945218,0,0,0,0,0.775912131907355,0,0.451961481561065,0,0,0,1.36885967914362,0.64127056201227,3.84215390530835,0,1.58499458869517,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,6.38972801596772,0,0,0,0,0,0,0.0824158583811665,0.26961417541674,0.0984274815147488,0,0,0.136203406111576,3.85807556316046,4.12618309791701,11.6323294648172,1.799791132412,1.5476039091159,0,1.0063040627978,0.157611414598396,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,2.4913879725274,1.32506888912221,0,0.13223260174269,0.171086837884329,0.704815022316672,0.640724475406168,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0.554645257684261,0,0,0,0.151649117541648,1.14186133417987,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0.260994291965212,0.453411851024545,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,1.67855409263333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.981477185010256,0,5.13600075860701,0.462102664601353,0,0,0,0.225630985047772,0,1.56302802246618,4.19050711170276,0,0.295712172434091,0,0,0,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,2.29972369751271,0,0,0,0,1.06442844195167,0,0,0,0,0.118193840883968,0.333694205676207,0.235479278551542,0,0.840816489941367,0,0.431855182437243,0,0.214429632529969,0,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0,0,2.11693525095465,4.582137370881,0,0,6.15204874887858,0,1.21917924982269,0,0,0,1.45713297917742,0,0.198950775161368,0,0.22589216407792,0,0.301925687133347,4.09023037972107,2.84127428655144,10.3469805199535,0,0.235676547101626,0.196308467114945,0,0.4226557275834,0,0,0.128915775947154,0.0999411559249289,1.42843150884526,2.82315897372553,1.20362050033752,0,2.75237570042724,0.143339583151451,0,0,0,4.7612415646386,0,0,0,0,0,0,0.917899467677836,1.06886962106224,1.65410819162721,4.26202816797038,0.227336094654718,0,0,0.103432995861895,1.91910583710883,1.66645102024618,0.258355639344024,0.124149428591716,0,1.65482611523229,1.21270313374932,2.39488422686657,0,0.26940821205835,0.502055437748735,0.332660356546013,0.325613074443898,0,0,0.0898252021065869,2.3464094240345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| ||
|short_description=p2@CDH1 | |short_description=p2@CDH1 | ||
}} | }} |
Latest revision as of 14:12, 17 September 2015
Short description: | p2@CDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_X12790_5end |
EntrezGene: | CDH1 |
HGNC: | 1748 |
UniProt: | P12830 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.93e-16 | 42 |
endodermal cell | 3.64e-13 | 58 |
epithelial cell | 2.76e-11 | 253 |
germ line cell | 4.70e-11 | 7 |
germ cell | 4.70e-11 | 7 |
epithelial cell of prostate | 1.94e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.10e-07 | 3 |
respiratory epithelial cell | 1.31e-07 | 13 |
epithelial cell of Malassez | 8.87e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.15e-10 | 160 |
endoderm | 5.15e-10 | 160 |
presumptive endoderm | 5.15e-10 | 160 |
egg chorion | 1.10e-07 | 3 |
digestive system | 2.32e-07 | 145 |
digestive tract | 2.32e-07 | 145 |
primitive gut | 2.32e-07 | 145 |
endo-epithelium | 6.15e-07 | 82 |