FFCP PHASE1:Hg19::chr16:6069291..6069296,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54715 | |EntrezGene=54715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18222 | |HGNC=18222 | ||
|TSSclassifier=strong | |||
|UniProt=Q59HD3,Q9NWB1 | |UniProt=Q59HD3,Q9NWB1 | ||
|association_with_transcript=159bp_to_ENST00000550418,ENST00000553186,NM_001142333,NM_018723,uc002cyr.1,uc002cys.2,uc002cyt.2,uc010buf.1_5end | |association_with_transcript=159bp_to_ENST00000550418,ENST00000553186,NM_001142333,NM_018723,uc002cyr.1,uc002cys.2,uc002cyt.2,uc010buf.1_5end | ||
|cluster_id=chr16:6069291..6069296,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_28_at_RBFOX1_5end | |description=CAGE_peak_28_at_RBFOX1_5end | ||
|id=chr16:6069291..6069296,+ | |id=chr16:6069291..6069296,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.72e-66;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p28@RBFOX1 | |short_description=p28@RBFOX1 | ||
}} | }} |
Latest revision as of 06:54, 17 September 2015
Short description: | p28@RBFOX1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_RBFOX1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 159bp_to_ENST00000550418, ENST00000553186, NM_001142333, NM_018723, uc002cyr.1, uc002cys.2, uc002cyt.2, uc010buf.1_5end |
EntrezGene: | RBFOX1 |
HGNC: | 18222 |
UniProt: | Q59HD3Q9NWB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data