FFCP PHASE1:Hg19::chr17:46621279..46621297,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:46621279..46621297,-
|short_description=p13@HOXB2
|description=CAGE_peak_13_at_HOXB2_5end
|association_with_transcript=-8bp_to_ENST00000504772_5end
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3212 | |EntrezGene=3212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5113 | |HGNC=5113 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000504772_5end | |||
|cluster_id=chr17:46621279..46621297,- | |||
|description=CAGE_peak_13_at_HOXB2_5end | |||
|id=chr17:46621279..46621297,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.95e-12;5!CL:0002570;2.01e-09;8!CL:0002494;1.81e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.32e-12,5;CL:0002028,5.32e-12,5;CL:0002570,1.06e-09,8;CL:0002494,2.81e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;7.85e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,4.97e-07,14 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,0,0,0,2.53299878168311,0,0,0.245733936501509,0,0.655324116390517,0,0.866364470720326,0.331397375727916,0,1.20538905604795,1.46062018077475,0,0,0.408001382488506,2.5076377718247,0,0.684372125364421,0.502170558379211,0.840547463227464,0.738905305049512,1.49550484495991,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.434021741431704,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0.300353785683013,0,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,0.853460445133014,0.400395987036012,0,1.32208974556972,1.90810750907073,0,0,0.382273228125229,0,0,0.526768169550154,0.983548850569165,0.393010762749165,1.23360899399706,1.5046784585161,3.91106719960308,0.946895611469467,0,0.668462741311041,0.883817722424512,2.21533894583621,2.70803863765016,1.28091319725675,1.95089021339817,2.46656856905514,2.21080014228679,0.869409257205157,0.593146252648242,1.07016331235885,2.09071047609954,0.566546713487831,1.53288197440768,2.06176467289578,0.759059076058509,1.59282707162048,0.651083453856419,0.950452044448374,0.451725357233318,0.383959833463255,0,2.36777252044017,0.821127996921047,0,0,0.724122019413995,2.43806866313962,2.68280343881454,0.511450247374121,0,0,0.289693037921647,0,0.486634870302636,0.378139268656271,0.221729397462564,0,0.392937226493138,0,0,0,0,0,0,0,0.371457501329565,0.39752481473341,0.860234595106124,0.347140501607594,0.56530794192401,1.25849830862972,0,0.417989933073621,0.775250277507987,0.71153252537342,0.66944122552934,0,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0.993943903390637,0.506522046658319,1.98613771219828,0.860509862246441,0.709336764396714,1.12135520028461,0,0.24666754841716,0.311211035399766,0.404132016209064,0.980771418680752,0,0,0,0.624320153660641,0.570471821544449,0.448346041655403,0.469737994575059,0.161872944368132,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.680593098960126,0.358779271377724,1.06778694409284,0.635795703478686,0.900273288253207,0.412210116953756,0.257640540045629,0.558350568994769,0.675105328965065,0.487185025805993,0,0.828449087780694,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,1.38134921352481,0,1.44375896333917,0.591534000199219,0.168584690078102,0,0.55146986366197,0.435758888184812,0.71181185733329,0.539325232640658,0.196221465125346,0,0.738155454624648,2.80483547606892,1.6462960453256,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.445893486866185,1.87467667973554,0,0.141775097242386,0.626909658919938,0.290633938513962,0.766765358330422,5.41929561685538,13.8236041400765,2.28060927094849,1.44119953416961,2.90357596880674,0.761974731506028,0.763976851116555,1.17217447210047,0,0.411309970813294,0.901029173531752,0,0.112131084345361,0,0.07333828582095,0.646358578788889,3.57656445851882,1.690605505112,0.531876233169741,0,0.514414748524284,0,0.266422179016099,0.285955987316295,0,0,0.977208552881205,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.299918973546171,0,0,0,0,0,1.42636905040718,1.30303176000821,0.61642896765115,1.25342674267927,0.560425719967636,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,1.34960640891054,1.00034104211935,0.813795071099207,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0.553107505625109,0.347534457872331,0.195801157462741,0,0.206768026122887,0.215714200818617,0.426910231213777,0.303127571446259,1.66435439510497,0.30239029332968,0,0.920771839728375,1.40330047216537,0.512556597022804,0.511707249066704,0.64341568457443,0,1.3878872442239,4.6166048581413,1.64254312027618,2.07701771673448,0.581051892299796,0,0,0,0.34444334449382,0.182091168006717,1.44236856455367,0.902399225814824,0.308061348417659,1.56869953835371,1.46139224653261,0.316654886678627,0,0,0.863663664408557,0,1.08378575017541,1.50506932156456,0.764628819135115,1.66215201785745,0.671624264166535,0.657779629937804,0.784306353074702,0,0.328014645699706,0,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0.386682873168488,0.616194468458578,0.307007349452259,0.137836572484531,0,0.435050081742686,1.61930592090592,0.979352392114111,0,0,0,0,0.464845549297286,0.62962469366128,2.0911118104818,0,0,0.869932992075073,0,0,0,0.316379424718726,1.14378116354295,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0.202182481573316,3.17020642346017,1.26377536871694,1.46290121726877,1.70599442741899,0,0,0.141405431953713,0,0,0.66343897524122,0,0.578775534266688,0,0,0.30982349809975,0,0.573645408816206,0.294747123039363,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,1.68471475667626,0,0,0,0,2.27858874869665,0.714695326373367,0.411362273086194,0.648473311192717,0.540031437238115,2.37937552888281,0.320472213382419,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0.222886768554957,2.27308917445131,0,0.296964680832639,0,0,0,0,0,0,0.597743964753209,0.276283915531148,0.503865495708552,0.511343412510774,0.369254416383208,0.622079175323615,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0.174919999992391,2.17499872630438,0,0,0.236387681767936,0,0.291604613383254,0.520874984799877,0,0,0,0,0,0,0,0.278847488557207,0.307801034015188,1.13942055847001,0,0,0.434589487688032,0.31900115973192,0.183195186803725,0,0,0.941881538370149,0,0.676786981851542,0.19606253431774,1.51039428278258,0.189753732724185,0.317873157960757,0.210998064528027,0.489698424477443,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,2.42780379534093,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0.569219092059585,0.693373365065693,0,0,0.261177619741208,1.22308667769421,0.51595809741485,0,0,0,0.484945082442097,0.617792886840502,0,0.959293472527256,0,0,0,0,0.85381197895741,0,0.576361668616424,0.916292769327325,0.343189995723929,0,0,0.235694034616795,0.271808412147228,0.313808538937,0,0.288950589901519,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0.399358000997982,0.858452096273142,0,0.403100834920358,0.360299883542404,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.394028536495991,0.83927341015997,0,0,0,0,0,1.27134268827375,0,0.864221491201268,0,0,1.55975789423744,1.19271615249795,0.566560457600628,0.293104467356165,0,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0.638341257770182,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0.573409195690071,0.776503360757966,0.620964029413834,0,0,0.758245587708239,0.285465333544967,0,0,0,2.83584125485061,1.8697064787778,2.77402930751307,0.378806010550178,1.0062716070103,0.889811221596536,0.228840068396924,2.87338755150154,1.39893480524502,1.03498604992744,0.796483835818512,0.449803112163605,2.17368139626763,1.24411862352257,5.3168342911599,0,0.450772826991655,0.380805212168795,0.406870733204662,1.27294061441792,1.50374779859484,0.464033759878494,0,2.00013882331577,1.03018711554838,0.673498977531838,0,0.770479321629213,0,0,0.226705925512272,0.694567422971502,0.734210113519403,0.358177682162975,0,0.219284049578707,0.176689145945881,0.578742114812744,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.867550349813015,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0.198916222116275,0.300841313397029,0.20170506870352,0.781514011233092,0,0,0.591424344868181,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.921871900446234,0.171488009437418,0,0,0,0,0.235479278551542,0,0,0,0.863710364874486,0,0,0,1.27865567904938,0,0,0,0,0,0,0.236664001461131,0.511280428554946,0,0,1.86123831398592,0,0,1.07965256976767,0,0,0.513314034281235,0,0.485710993059139,0.233939463462106,0,0.118920090777569,0,0,1.50962843566674,0.231522474323834,0.437119121007915,0,0.490296643507811,0.707029641304878,0,0.594092800654172,0.8453114551668,0.509781344063451,0.469919589899268,0.515663103788617,0,0,0,0,0.730336388246517,0,0.430018749454354,0.157771562193185,0,0,0,0.743990036333503,0,0.865253124247578,0,0,0.380095503034311,0,0,0.275684698604535,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0.452122368852043,0.496597714366863,0,0.12729431655633,0,0,0.684466602170562,0.471464371102113,0.358611026963382,1.33064142618405,0,0.320182037633146,0,0.0898252021065869,0,0.244482888365733,0.813792356631477,0,0.201273793591026,0.320568492303233 | |phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,0,0,0,2.53299878168311,0,0,0.245733936501509,0,0.655324116390517,0,0.866364470720326,0.331397375727916,0,1.20538905604795,1.46062018077475,0,0,0.408001382488506,2.5076377718247,0,0.684372125364421,0.502170558379211,0.840547463227464,0.738905305049512,1.49550484495991,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.434021741431704,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0.300353785683013,0,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,0.853460445133014,0.400395987036012,0,1.32208974556972,1.90810750907073,0,0,0.382273228125229,0,0,0.526768169550154,0.983548850569165,0.393010762749165,1.23360899399706,1.5046784585161,3.91106719960308,0.946895611469467,0,0.668462741311041,0.883817722424512,2.21533894583621,2.70803863765016,1.28091319725675,1.95089021339817,2.46656856905514,2.21080014228679,0.869409257205157,0.593146252648242,1.07016331235885,2.09071047609954,0.566546713487831,1.53288197440768,2.06176467289578,0.759059076058509,1.59282707162048,0.651083453856419,0.950452044448374,0.451725357233318,0.383959833463255,0,2.36777252044017,0.821127996921047,0,0,0.724122019413995,2.43806866313962,2.68280343881454,0.511450247374121,0,0,0.289693037921647,0,0.486634870302636,0.378139268656271,0.221729397462564,0,0.392937226493138,0,0,0,0,0,0,0,0.371457501329565,0.39752481473341,0.860234595106124,0.347140501607594,0.56530794192401,1.25849830862972,0,0.417989933073621,0.775250277507987,0.71153252537342,0.66944122552934,0,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0.993943903390637,0.506522046658319,1.98613771219828,0.860509862246441,0.709336764396714,1.12135520028461,0,0.24666754841716,0.311211035399766,0.404132016209064,0.980771418680752,0,0,0,0.624320153660641,0.570471821544449,0.448346041655403,0.469737994575059,0.161872944368132,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.680593098960126,0.358779271377724,1.06778694409284,0.635795703478686,0.900273288253207,0.412210116953756,0.257640540045629,0.558350568994769,0.675105328965065,0.487185025805993,0,0.828449087780694,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,1.38134921352481,0,1.44375896333917,0.591534000199219,0.168584690078102,0,0.55146986366197,0.435758888184812,0.71181185733329,0.539325232640658,0.196221465125346,0,0.738155454624648,2.80483547606892,1.6462960453256,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.445893486866185,1.87467667973554,0,0.141775097242386,0.626909658919938,0.290633938513962,0.766765358330422,5.41929561685538,13.8236041400765,2.28060927094849,1.44119953416961,2.90357596880674,0.761974731506028,0.763976851116555,1.17217447210047,0,0.411309970813294,0.901029173531752,0,0.112131084345361,0,0.07333828582095,0.646358578788889,3.57656445851882,1.690605505112,0.531876233169741,0,0.514414748524284,0,0.266422179016099,0.285955987316295,0,0,0.977208552881205,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.299918973546171,0,0,0,0,0,1.42636905040718,1.30303176000821,0.61642896765115,1.25342674267927,0.560425719967636,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,1.34960640891054,1.00034104211935,0.813795071099207,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0.553107505625109,0.347534457872331,0.195801157462741,0,0.206768026122887,0.215714200818617,0.426910231213777,0.303127571446259,1.66435439510497,0.30239029332968,0,0.920771839728375,1.40330047216537,0.512556597022804,0.511707249066704,0.64341568457443,0,1.3878872442239,4.6166048581413,1.64254312027618,2.07701771673448,0.581051892299796,0,0,0,0.34444334449382,0.182091168006717,1.44236856455367,0.902399225814824,0.308061348417659,1.56869953835371,1.46139224653261,0.316654886678627,0,0,0.863663664408557,0,1.08378575017541,1.50506932156456,0.764628819135115,1.66215201785745,0.671624264166535,0.657779629937804,0.784306353074702,0,0.328014645699706,0,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0.386682873168488,0.616194468458578,0.307007349452259,0.137836572484531,0,0.435050081742686,1.61930592090592,0.979352392114111,0,0,0,0,0.464845549297286,0.62962469366128,2.0911118104818,0,0,0.869932992075073,0,0,0,0.316379424718726,1.14378116354295,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0.202182481573316,3.17020642346017,1.26377536871694,1.46290121726877,1.70599442741899,0,0,0.141405431953713,0,0,0.66343897524122,0,0.578775534266688,0,0,0.30982349809975,0,0.573645408816206,0.294747123039363,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,1.68471475667626,0,0,0,0,2.27858874869665,0.714695326373367,0.411362273086194,0.648473311192717,0.540031437238115,2.37937552888281,0.320472213382419,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0.222886768554957,2.27308917445131,0,0.296964680832639,0,0,0,0,0,0,0.597743964753209,0.276283915531148,0.503865495708552,0.511343412510774,0.369254416383208,0.622079175323615,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0.174919999992391,2.17499872630438,0,0,0.236387681767936,0,0.291604613383254,0.520874984799877,0,0,0,0,0,0,0,0.278847488557207,0.307801034015188,1.13942055847001,0,0,0.434589487688032,0.31900115973192,0.183195186803725,0,0,0.941881538370149,0,0.676786981851542,0.19606253431774,1.51039428278258,0.189753732724185,0.317873157960757,0.210998064528027,0.489698424477443,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,2.42780379534093,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0.569219092059585,0.693373365065693,0,0,0.261177619741208,1.22308667769421,0.51595809741485,0,0,0,0.484945082442097,0.617792886840502,0,0.959293472527256,0,0,0,0,0.85381197895741,0,0.576361668616424,0.916292769327325,0.343189995723929,0,0,0.235694034616795,0.271808412147228,0.313808538937,0,0.288950589901519,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0.399358000997982,0.858452096273142,0,0.403100834920358,0.360299883542404,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.394028536495991,0.83927341015997,0,0,0,0,0,1.27134268827375,0,0.864221491201268,0,0,1.55975789423744,1.19271615249795,0.566560457600628,0.293104467356165,0,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0.638341257770182,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0.573409195690071,0.776503360757966,0.620964029413834,0,0,0.758245587708239,0.285465333544967,0,0,0,2.83584125485061,1.8697064787778,2.77402930751307,0.378806010550178,1.0062716070103,0.889811221596536,0.228840068396924,2.87338755150154,1.39893480524502,1.03498604992744,0.796483835818512,0.449803112163605,2.17368139626763,1.24411862352257,5.3168342911599,0,0.450772826991655,0.380805212168795,0.406870733204662,1.27294061441792,1.50374779859484,0.464033759878494,0,2.00013882331577,1.03018711554838,0.673498977531838,0,0.770479321629213,0,0,0.226705925512272,0.694567422971502,0.734210113519403,0.358177682162975,0,0.219284049578707,0.176689145945881,0.578742114812744,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.867550349813015,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0.198916222116275,0.300841313397029,0.20170506870352,0.781514011233092,0,0,0.591424344868181,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.921871900446234,0.171488009437418,0,0,0,0,0.235479278551542,0,0,0,0.863710364874486,0,0,0,1.27865567904938,0,0,0,0,0,0,0.236664001461131,0.511280428554946,0,0,1.86123831398592,0,0,1.07965256976767,0,0,0.513314034281235,0,0.485710993059139,0.233939463462106,0,0.118920090777569,0,0,1.50962843566674,0.231522474323834,0.437119121007915,0,0.490296643507811,0.707029641304878,0,0.594092800654172,0.8453114551668,0.509781344063451,0.469919589899268,0.515663103788617,0,0,0,0,0.730336388246517,0,0.430018749454354,0.157771562193185,0,0,0,0.743990036333503,0,0.865253124247578,0,0,0.380095503034311,0,0,0.275684698604535,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0.452122368852043,0.496597714366863,0,0.12729431655633,0,0,0.684466602170562,0.471464371102113,0.358611026963382,1.33064142618405,0,0.320182037633146,0,0.0898252021065869,0,0.244482888365733,0.813792356631477,0,0.201273793591026,0.320568492303233 | ||
|short_description=p13@HOXB2 | |||
}} | }} |
Latest revision as of 06:37, 25 September 2015
Short description: | p13@HOXB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_HOXB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000504772_5end |
EntrezGene: | HOXB2 |
HGNC: | 5113 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.32e-12 | 5 |
basophil mast progenitor cell | 5.32e-12 | 5 |
mesenchymal stem cell of adipose | 1.06e-09 | 8 |
cardiocyte | 2.81e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 4.97e-07 | 14 |