FFCP PHASE1:Hg19::chr17:4643045..4643078,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:4643045..4643078,-
|short_description=p2@CXCL16
|description=CAGE_peak_2_at_CXCL16_5end
|association_with_transcript=144bp_to_ENST00000293778,NM_001100812...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58191 | |EntrezGene=58191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16642 | |HGNC=16642 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2A7 | |UniProt=Q9H2A7 | ||
|association_with_transcript=144bp_to_ENST00000293778,NM_001100812,NM_022059,uc002fyr.3,uc002fys.3_5end | |||
|cluster_id=chr17:4643045..4643078,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_CXCL16_5end | |||
|id=chr17:4643045..4643078,- | |||
|ontology_enrichment_celltype=CL:0000766!5.49e-36!76;CL:0000557!2.03e-31!71;CL:0002009!8.00e-31!65;CL:0002194!1.36e-29!63;CL:0000576!1.36e-29!63;CL:0000040!1.36e-29!63;CL:0000559!1.36e-29!63;CL:0000839!3.75e-29!70;CL:0002057!6.82e-29!42;CL:0000860!2.17e-26!45;CL:0000738!3.21e-23!140;CL:0000763!3.48e-17!112;CL:0000049!3.48e-17!112;CL:0002031!1.09e-15!124;CL:0002087!1.68e-15!119;CL:0000037!4.98e-11!172;CL:0000566!4.98e-11!172;CL:0000988!1.93e-10!182;CL:0002032!2.68e-10!165;CL:0000837!2.68e-10!165;CL:0000451!4.11e-07!10;CL:0002393!8.17e-07!9;CL:0002397!8.17e-07!9;CL:0000990!9.03e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.95e-28;33!CL:0002057;4.95e-28;33!CL:0000473;1.09e-27;39!CL:0000234;1.09e-27;39!CL:0000576;7.42e-24;48!CL:0000766;2.42e-21;69!CL:0000451;5.75e-09;10!CL:0000738;1.24e-08;136!CL:0000990;1.62e-08;8!CL:0000763;4.72e-08;100!CL:0000094;2.34e-07;8!CL:0002087;2.80e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.34e-51,72;CL:0000557,3.64e-45,67;CL:0002009,3.91e-44,61;CL:0000473,3.72e-43,48;CL:0000234,3.72e-43,48;CL:0002194,1.81e-42,59;CL:0000576,1.81e-42,59;CL:0000040,1.81e-42,59;CL:0000559,1.81e-42,59;CL:0000839,2.11e-42,66;CL:0000860,5.46e-38,42;CL:0002057,5.46e-38,42;CL:0000738,6.56e-33,136;CL:0000763,9.90e-31,108;CL:0000049,9.90e-31,108;CL:0002031,4.10e-23,120;CL:0002087,5.63e-22,115;CL:0000037,2.29e-20,168;CL:0002032,6.93e-19,161;CL:0000837,6.93e-19,161;CL:0000988,1.30e-18,177;CL:0000451,5.88e-09,10;CL:0002393,1.46e-08,9;CL:0002397,1.46e-08,9;CL:0000990,1.67e-08,8;CL:0000094,2.37e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-27;42!CL:0000049;9.62e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.55e-36!115;UBERON:0002390!1.45e-27!102;UBERON:0003061!1.45e-27!102;UBERON:0002193!1.15e-26!112;UBERON:0002371!5.26e-24!80;UBERON:0001474!8.06e-23!86;UBERON:0002405!1.21e-22!115;UBERON:0004765!2.17e-17!101;UBERON:0001434!2.17e-17!101;UBERON:0001049!9.71e-15!57;UBERON:0005068!9.71e-15!57;UBERON:0006241!9.71e-15!57;UBERON:0007135!9.71e-15!57;UBERON:0000062!1.18e-14!511;UBERON:0003081!1.05e-12!216;UBERON:0003080!1.40e-12!42;UBERON:0002780!3.21e-12!41;UBERON:0001890!3.21e-12!41;UBERON:0006240!3.21e-12!41;UBERON:0000467!2.26e-11!625;UBERON:0000480!2.40e-11!626;UBERON:0002616!3.46e-11!59;UBERON:0002050!4.47e-10!605;UBERON:0005423!4.47e-10!605;UBERON:0000922!5.31e-10!612;UBERON:0000923!6.65e-10!604;UBERON:0005291!6.65e-10!604;UBERON:0006598!6.65e-10!604;UBERON:0002532!6.65e-10!604;UBERON:0001893!9.07e-10!34;UBERON:0002020!1.08e-09!34;UBERON:0003528!1.08e-09!34;UBERON:0003075!1.62e-09!86;UBERON:0007284!1.62e-09!86;UBERON:0000955!1.86e-09!69;UBERON:0006238!1.86e-09!69;UBERON:0002791!1.97e-09!33;UBERON:0000468!6.31e-09!659;UBERON:0001869!7.55e-09!32;UBERON:0001017!8.31e-09!82;UBERON:0002619!1.50e-08!22;UBERON:0005743!3.16e-08!86;UBERON:0002346!5.47e-08!90;UBERON:0001950!1.15e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.07e-11;41!UBERON:0001890;1.07e-11;41!UBERON:0007023;1.95e-11;114!UBERON:0001893;5.00e-11;34!UBERON:0003528;1.14e-10;34!UBERON:0002020;1.14e-10;34!UBERON:0002791;2.14e-10;32!UBERON:0000073;2.36e-10;53!UBERON:0002616;2.36e-10;53!UBERON:0001869;2.94e-10;32!UBERON:0002619;5.51e-10;22!UBERON:0001950;7.81e-09;20!UBERON:0000956;4.96e-08;25!UBERON:0000203;4.96e-08;25 | |||
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|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0,0,0,0,0.522371256399677,0.245733936501509,1.39560233594486,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0.152826811495903,0.0821005894499457,0,38.9430634080415,15.7370053219857,64.4035072994876,1.83884244895785,0.30120591877825,0,0,0,0,32.6857291033808,49.3339340776549,39.0619567288533,112.853399016922,89.0707581552194,94.7878088893807,131.876202573065,115.630038768776,79.8101561307915,144.33843191843,121.70569485446,110.874880780447,189.589286540297,123.469460547027,85.3700849897793,125.832173468866,92.949794436071,85.3186865544353,155.488172462191,107.797929272849,70.3384506313115,183.650335422542,129.655326938742,111.244659889033,138.207694778234,112.896430213844,94.1956698677254,159.615081245721,128.796446004889,94.6689818473274,140.448003878519,98.0387886629979,77.9707952491369,128.344694558274,107.905347344356,74.3686610486078,49.4337369969944,53.1510749912609,49.6890989854851,34.93420428656,40.8481148528897,37.4490617004197,49.307204667236,44.9551690469944,55.7125668982134,1.75996244461323,3.82297027883492,2.66852776159066,4.26730222566507,1.20118796110804,4.02326707968138,0.661044872784862,0.954053754535364,3.41527781465669,6.45960908308033,4.96955196562797,1.32171328579026,4.48406850385229,0.526768169550154,0,0,0.411202997999018,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.637130828648193,0,0,2.55977702432214,0.895906278080929,3.74792179657038,1.89421801635213,0.821127996921047,0,0.267440195783507,0.289648807765598,0,1.34140171940727,0.12786256184353,0,1.00267582127178,2.89693037921647,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,6.09052701064364,1.09288586487763,0.741568885568859,30.5074550035402,32.7363906122622,37.7600607873577,10.2550968451297,2.28797964312051,3.71457501329565,0.198762407366705,0,0.694281003215189,0,1.25849830862972,0.275118041940067,0,0.516833518338658,1.42306505074684,0,0.805658634218294,0,0.488124115096339,0.735326160691737,0.81014194788176,0.446498641420399,0.44905874525234,0.675668882899933,0,0,0.366403487860815,31.6273001846552,38.7780264148325,0.436094052142534,0,0,0,0,1.06400514659507,0.560677600142307,0,0.24666754841716,0.622422070799533,0.134710672069688,0,0.454072282934794,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0.103325781175765,1.18800285728205,1.48360157567134,0,0,0,0,0,0.438977620880838,0,3.30523729594513,0.113432183160021,0.179389635688862,0.427114777637135,0,0,0,0,0.37223371266318,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,1.15956511897978,0.545492241181669,0.573609190778008,0.121973706129595,0,0.464775771478074,0.10366105501537,0,0.36497735907583,0,0,0,0,0.721879481669586,0.709840800239063,1.18009283054671,0.241011029883482,0.441175890929576,0.217879444092406,0.71181185733329,0.404493924480493,0.588664395376038,0,4.42893272774789,2.80483547606892,0,0,2.53510069643662,3.9313088667105,5.90789906681404,0,0.122988438543114,0,0.548751427043128,1.1240175325762,0.502644862058154,0.277765335475589,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0.577465791044295,1.85194205030644,2.09279567458058,1.58040879591855,0,35.2090318704978,40.9507463993666,45.0352421734847,0,0.671928512795438,0.283550194484773,0.0895585227028483,0.290633938513962,0,6.40462209264727,5.37095447480679,4.35389042635621,3.31475892859011,3.28230326908588,0.190493682876507,1.90994212779139,0,0,0.205654985406647,0,0.285826432630578,0,1.30788020649984,0,0,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.399891964728228,121.62378064119,87.39273390919,103.308630346686,0.239624855491583,1.14861935834114,0,0,0.61642896765115,0,0,1.77327684181734,0.215627574859517,1.79680250791648,0,0,0,1.84267891867784,0,28.4622669099929,20.9413021442817,29.8379169673946,0.24538298343828,0.500170521059677,0,0.415941723061614,0,0,0.585707074963566,0,0,1.03473071292505,0,0,0.173767228936166,0.783204629850962,0,13.8534577502335,26.9642751023271,19.7445981936372,0.606255142892519,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.483437798366489,0.802025881213139,0.644566922551274,0.114814448164607,0.546273504020151,0.131124414959424,0.902399225814824,0.693138033939733,0.784349769176855,1.46139224653261,0.844413031143006,2.27466768141793,0.850468526382578,0,6.16909010761157,0.812839312631559,1.50506932156456,1.01950509218015,1.66215201785745,0,0,0,0.256450125116389,0,0,12.4679624093744,0.732555718546747,0.330037999682352,0.574265537996172,0.650060246036521,1.6068392984416,0,0,0,0,0.107420244868274,0,0.255679882248303,0,0.826424576804891,0.960950336825531,0.255225424989168,0.809262246844399,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0.636406495851874,0,0,0,0,0,0,0.421258456238981,0.48763373908959,0.487426979262569,0,0.136499911407986,0.424216295861138,3.39024349860728,0.551365343546124,0,0,0.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| ||
|short_description=p2@CXCL16 | |||
}} | }} |
Latest revision as of 06:19, 25 September 2015
Short description: | p2@CXCL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CXCL16_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 144bp_to_ENST00000293778, NM_001100812, NM_022059, uc002fyr.3, uc002fys.3_5end |
EntrezGene: | CXCL16 |
HGNC: | 16642 |
UniProt: | Q9H2A7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.34e-51 | 72 |
granulocyte monocyte progenitor cell | 3.64e-45 | 67 |
macrophage dendritic cell progenitor | 3.91e-44 | 61 |
defensive cell | 3.72e-43 | 48 |
phagocyte | 3.72e-43 | 48 |
monopoietic cell | 1.81e-42 | 59 |
monocyte | 1.81e-42 | 59 |
monoblast | 1.81e-42 | 59 |
promonocyte | 1.81e-42 | 59 |
myeloid lineage restricted progenitor cell | 2.11e-42 | 66 |
classical monocyte | 5.46e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.46e-38 | 42 |
leukocyte | 6.56e-33 | 136 |
myeloid cell | 9.90e-31 | 108 |
common myeloid progenitor | 9.90e-31 | 108 |
hematopoietic lineage restricted progenitor cell | 4.10e-23 | 120 |
nongranular leukocyte | 5.63e-22 | 115 |
hematopoietic stem cell | 2.29e-20 | 168 |
hematopoietic oligopotent progenitor cell | 6.93e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.93e-19 | 161 |
hematopoietic cell | 1.30e-18 | 177 |
dendritic cell | 5.88e-09 | 10 |
intermediate monocyte | 1.46e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.46e-08 | 9 |
conventional dendritic cell | 1.67e-08 | 8 |
granulocyte | 2.37e-07 | 8 |