FFCP PHASE1:Hg19::chr14:51955483..51955495,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-322bp_to_ENST00000556137_5end | |association_with_transcript=-322bp_to_ENST00000556137_5end | ||
|cluster_id=chr14:51955483..51955495,+ | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_23_at_FRMD6_5end | |description=CAGE_peak_23_at_FRMD6_5end | ||
|id=chr14:51955483..51955495,+ | |id=chr14:51955483..51955495,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.35e-27!43;CL:0000223!6.07e-20!59;CL:0000066!2.69e-18!254;CL:0002368!3.35e-17!13;CL:0000076!8.68e-15!62;CL:0002251!5.70e-14!21;CL:0002159!4.16e-13!13;CL:0000244!5.63e-13!4;CL:0000731!5.63e-13!4;CL:0002328!6.71e-10!3;CL:0002621!1.04e-09!3;CL:0000220!2.26e-08!246;CL:0002321!3.12e-08!248;CL:0002202!3.43e-08!9;CL:0002632!3.43e-08!9;CL:0000240!7.11e-08!6;CL:0000311!7.11e-08!6;CL:0000079!7.11e-08!6;CL:0000237!7.11e-08!6;CL:0000036!7.11e-08!6;CL:0000357!7.11e-08!6;CL:0000114!7.11e-08!6;CL:0002327!5.14e-07!4;CL:0002077!7.10e-07!33;CL:0000575!9.02e-07!2 | |ontology_enrichment_celltype=CL:0002076!4.35e-27!43;CL:0000223!6.07e-20!59;CL:0000066!2.69e-18!254;CL:0002368!3.35e-17!13;CL:0000076!8.68e-15!62;CL:0002251!5.70e-14!21;CL:0002159!4.16e-13!13;CL:0000244!5.63e-13!4;CL:0000731!5.63e-13!4;CL:0002328!6.71e-10!3;CL:0002621!1.04e-09!3;CL:0000220!2.26e-08!246;CL:0002321!3.12e-08!248;CL:0002202!3.43e-08!9;CL:0002632!3.43e-08!9;CL:0000240!7.11e-08!6;CL:0000311!7.11e-08!6;CL:0000079!7.11e-08!6;CL:0000237!7.11e-08!6;CL:0000036!7.11e-08!6;CL:0000357!7.11e-08!6;CL:0000114!7.11e-08!6;CL:0002327!5.14e-07!4;CL:0002077!7.10e-07!33;CL:0000575!9.02e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.25e-23;4!CL:0000731;2.25e-23;4!CL:0002328;2.96e-14;3!CL:0002231;2.96e-14;3!CL:0002368;1.40e-12;13!CL:0002076;5.36e-12;42!CL:0002159;1.58e-11;14!CL:0002336;3.81e-11;1!CL:0002261;3.81e-11;1!CL:0002170;3.81e-11;1!CL:0000240;1.86e-07;6!CL:0000311;1.86e-07;6!CL:0000079;1.86e-07;6!CL:0000237;1.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.17e-23,4;CL:0000731,2.17e-23,4;CL:0002328,2.26e-14,3;CL:0002231,2.42e-14,3;CL:0002076,2.51e-14,42;CL:0000066,3.85e-13,253;CL:0002368,1.10e-12,13;CL:0002159,1.77e-11,14;CL:0002336,6.00e-11,1;CL:0002261,6.00e-11,1;CL:0002170,6.00e-11,1;CL:0000223,4.10e-10,58;CL:0000076,4.80e-09,63;CL:0000240,2.41e-07,6;CL:0000311,2.41e-07,6;CL:0000079,2.41e-07,6;CL:0000237,2.41e-07,6;CL:0000036,2.41e-07,6;CL:0000357,2.41e-07,6;CL:0000114,2.41e-07,6;CL:0002077,3.74e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;1.86e-07;6!CL:0000114;1.86e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!2.72e-18!14 | |ontology_enrichment_disease=DOID:1749!2.72e-18!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.02e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!2.17e-16!35;UBERON:0000365!1.98e-15!5;UBERON:0003102!2.25e-15!95;UBERON:0003729!9.92e-14!5;UBERON:0000166!1.01e-13!21;UBERON:0005910!8.73e-13!6;UBERON:0001004!4.01e-12!72;UBERON:0000165!9.55e-12!28;UBERON:0000930!9.55e-12!28;UBERON:0004119!1.92e-11!169;UBERON:0000925!1.92e-11!169;UBERON:0006595!1.92e-11!169;UBERON:0003343!4.88e-11!4;UBERON:0004785!4.88e-11!4;UBERON:0000344!2.95e-10!12;UBERON:0004815!6.71e-10!3;UBERON:0002031!6.71e-10!3;UBERON:0001949!1.04e-09!3;UBERON:0001444!3.49e-08!48;UBERON:0002185!1.67e-07!4;UBERON:0001911!5.14e-07!4;UBERON:0005333!5.14e-07!4;UBERON:0008425!5.14e-07!4;UBERON:0005311!5.14e-07!4 | |ontology_enrichment_uberon=UBERON:0000161!2.17e-16!35;UBERON:0000365!1.98e-15!5;UBERON:0003102!2.25e-15!95;UBERON:0003729!9.92e-14!5;UBERON:0000166!1.01e-13!21;UBERON:0005910!8.73e-13!6;UBERON:0001004!4.01e-12!72;UBERON:0000165!9.55e-12!28;UBERON:0000930!9.55e-12!28;UBERON:0004119!1.92e-11!169;UBERON:0000925!1.92e-11!169;UBERON:0006595!1.92e-11!169;UBERON:0003343!4.88e-11!4;UBERON:0004785!4.88e-11!4;UBERON:0000344!2.95e-10!12;UBERON:0004815!6.71e-10!3;UBERON:0002031!6.71e-10!3;UBERON:0001949!1.04e-09!3;UBERON:0001444!3.49e-08!48;UBERON:0002185!1.67e-07!4;UBERON:0001911!5.14e-07!4;UBERON:0005333!5.14e-07!4;UBERON:0008425!5.14e-07!4;UBERON:0005311!5.14e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;7.83e-19;5!UBERON:0005910;8.48e-16;6!UBERON:0004815;2.96e-14;3!UBERON:0002031;2.96e-14;3!UBERON:0000486;9.43e-14;12!UBERON:0005911;2.15e-10;36!UBERON:0002185;6.44e-09;5!UBERON:0004807;1.84e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,7.61e-19,5;UBERON:0005910,8.27e-16,6;UBERON:0004815,2.26e-14,3;UBERON:0002031,2.26e-14,3;UBERON:0002185,5.49e-09,5;UBERON:0005911,1.02e-08,82;UBERON:0005157,3.26e-07,47;UBERON:0004119,4.12e-07,160;UBERON:0000925,4.12e-07,160;UBERON:0006595,4.12e-07,160 | |||
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| ||
|short_description=p23@FRMD6 | |short_description=p23@FRMD6 | ||
}} | }} |
Latest revision as of 04:42, 20 September 2015
Short description: | p23@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_FRMD6_5end |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | -322bp_to_ENST00000556137_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.17e-23 | 4 |
urothelial cell | 2.17e-23 | 4 |
bronchial epithelial cell | 2.26e-14 | 3 |
epithelial cell of prostate | 2.42e-14 | 3 |
endo-epithelial cell | 2.51e-14 | 42 |
epithelial cell | 3.85e-13 | 253 |
respiratory epithelial cell | 1.10e-12 | 13 |
general ecto-epithelial cell | 1.77e-11 | 14 |
buccal mucosa cell | 6.00e-11 | 1 |
endothelial cell of viscerocranial mucosa | 6.00e-11 | 1 |
keratinized cell of the oral mucosa | 6.00e-11 | 1 |
endodermal cell | 4.10e-10 | 58 |
squamous epithelial cell | 4.80e-09 | 63 |
stratified squamous epithelial cell | 2.41e-07 | 6 |
keratin accumulating cell | 2.41e-07 | 6 |
stratified epithelial cell | 2.41e-07 | 6 |
keratinizing barrier epithelial cell | 2.41e-07 | 6 |
epithelial fate stem cell | 2.41e-07 | 6 |
stratified epithelial stem cell | 2.41e-07 | 6 |
surface ectodermal cell | 2.41e-07 | 6 |
ecto-epithelial cell | 3.74e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
urothelium | 7.61e-19 | 5 |
transitional epithelium | 8.27e-16 | 6 |
lower respiratory tract epithelium | 2.26e-14 | 3 |
epithelium of bronchus | 2.26e-14 | 3 |
bronchus | 5.49e-09 | 5 |
endo-epithelium | 1.02e-08 | 82 |
epithelial fold | 3.26e-07 | 47 |
endoderm-derived structure | 4.12e-07 | 160 |
endoderm | 4.12e-07 | 160 |
presumptive endoderm | 4.12e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.02e-07 | 14 |