FFCP PHASE1:Hg19::chr17:4639645..4639665,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:4639645..4639665,-
|short_description=p4@CXCL16
|description=CAGE_peak_4_at_CXCL16_5end
|association_with_transcript=9bp_to_uc002fyq.3_5end
|EntrezGene=5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58191 | |EntrezGene=58191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16642 | |HGNC=16642 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_uc002fyq.3_5end | |||
|cluster_id=chr17:4639645..4639665,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_CXCL16_5end | |||
|id=chr17:4639645..4639665,- | |||
|ontology_enrichment_celltype=CL:0000766!4.04e-52!76;CL:0000557!3.22e-45!71;CL:0000763!1.09e-44!112;CL:0000049!1.09e-44!112;CL:0000839!1.77e-42!70;CL:0002009!1.21e-41!65;CL:0002194!6.13e-40!63;CL:0000576!6.13e-40!63;CL:0000040!6.13e-40!63;CL:0000559!6.13e-40!63;CL:0002057!3.91e-39!42;CL:0000860!3.82e-35!45;CL:0000738!4.39e-30!140;CL:0000037!1.30e-26!172;CL:0000566!1.30e-26!172;CL:0002032!6.78e-25!165;CL:0000837!6.78e-25!165;CL:0000988!6.27e-24!182;CL:0002031!3.75e-20!124;CL:0002087!7.34e-18!119;CL:0000094!1.21e-08!8;CL:0000451!1.64e-08!10;CL:0002393!1.71e-08!9;CL:0002397!1.71e-08!9;CL:0000990!5.88e-08!8;CL:0000115!4.87e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.84e-43;33!CL:0002057;6.84e-43;33!CL:0000473;1.05e-41;39!CL:0000234;1.05e-41;39!CL:0000576;1.82e-36;48!CL:0000766;1.02e-34;69!CL:0000763;1.95e-15;100!CL:0000094;3.95e-12;8!CL:0000738;1.00e-11;136!CL:0000990;4.08e-11;8!CL:0000451;1.61e-10;10!CL:0000235;1.43e-08;6!CL:0002393;2.48e-08;6!CL:0002397;2.48e-08;6!CL:0000081;2.95e-08;11!CL:0000097;3.65e-08;5!CL:0002087;4.85e-08;104!CL:0000453;1.42e-07;5!CL:0000840;1.42e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.47e-84,72;CL:0000557,1.12e-73,67;CL:0000839,1.21e-69,66;CL:0002009,5.08e-68,61;CL:0002194,2.04e-65,59;CL:0000576,2.04e-65,59;CL:0000040,2.04e-65,59;CL:0000559,2.04e-65,59;CL:0000473,2.59e-65,48;CL:0000234,2.59e-65,48;CL:0000763,1.03e-62,108;CL:0000049,1.03e-62,108;CL:0000860,6.88e-58,42;CL:0002057,6.88e-58,42;CL:0000738,4.67e-46,136;CL:0000037,1.08e-35,168;CL:0002032,1.21e-33,161;CL:0000837,1.21e-33,161;CL:0000988,1.47e-32,177;CL:0002031,1.27e-31,120;CL:0002087,6.73e-28,115;CL:0000094,3.81e-12,8;CL:0002393,6.34e-12,9;CL:0002397,6.34e-12,9;CL:0000990,4.00e-11,8;CL:0000451,1.81e-10,10;CL:0000235,1.42e-08,6;CL:0000081,2.88e-08,11;CL:0000097,3.74e-08,5;CL:0002028,3.74e-08,5;CL:0000840,1.39e-07,5;CL:0001029,1.39e-07,5;CL:0000453,1.42e-07,5;CL:0000134,6.88e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-41;42!CL:0000049;4.33e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.10e-44!112;UBERON:0007023!1.14e-43!115;UBERON:0002390!3.48e-43!102;UBERON:0003061!3.48e-43!102;UBERON:0002371!6.00e-37!80;UBERON:0002405!1.77e-33!115;UBERON:0001474!1.90e-32!86;UBERON:0004765!7.33e-26!101;UBERON:0001434!7.33e-26!101;UBERON:0003081!1.19e-23!216;UBERON:0001049!1.80e-13!57;UBERON:0005068!1.80e-13!57;UBERON:0006241!1.80e-13!57;UBERON:0007135!1.80e-13!57;UBERON:0002780!2.36e-11!41;UBERON:0001890!2.36e-11!41;UBERON:0006240!2.36e-11!41;UBERON:0003080!7.59e-11!42;UBERON:0002616!3.56e-10!59;UBERON:0002204!1.19e-09!167;UBERON:0001893!1.88e-09!34;UBERON:0002020!2.17e-09!34;UBERON:0003528!2.17e-09!34;UBERON:0002791!4.79e-09!33;UBERON:0001869!1.97e-08!32;UBERON:0000467!2.41e-08!625;UBERON:0000480!3.06e-08!626;UBERON:0000479!3.37e-08!787;UBERON:0001017!4.24e-08!82;UBERON:0000955!4.83e-08!69;UBERON:0006238!4.83e-08!69;UBERON:0003075!5.84e-08!86;UBERON:0007284!5.84e-08!86;UBERON:0005743!1.04e-07!86;UBERON:0002619!4.13e-07!22;UBERON:0000062!4.64e-07!511;UBERON:0002346!4.71e-07!90;UBERON:0000178!5.92e-07!15;UBERON:0000179!5.92e-07!15;UBERON:0000463!5.92e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.29e-10;15!UBERON:0000179;2.29e-10;15!UBERON:0000463;2.29e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.01e-71,98;UBERON:0003061,1.01e-71,98;UBERON:0002193,1.75e-66,108;UBERON:0002371,2.33e-62,76;UBERON:0001474,3.38e-56,82;UBERON:0002405,5.54e-56,93;UBERON:0004765,2.88e-49,90;UBERON:0001434,3.50e-42,100;UBERON:0003081,8.11e-36,203;UBERON:0002204,4.93e-20,167;UBERON:0000926,2.61e-16,315;UBERON:0004120,2.61e-16,315;UBERON:0006603,2.61e-16,315;UBERON:0007023,5.32e-15,114;UBERON:0000178,2.36e-10,15;UBERON:0000179,2.36e-10,15;UBERON:0000463,2.36e-10,15;UBERON:0000923,4.29e-09,560;UBERON:0010316,4.29e-09,560;UBERON:0005291,4.29e-09,560;UBERON:0006598,4.29e-09,560;UBERON:0010317,4.29e-09,560;UBERON:0002532,4.29e-09,560;UBERON:0002050,8.38e-09,564;UBERON:0005423,1.26e-07,581;UBERON:0000922,2.82e-07,592 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,17.7013924582007,9.97956435052753,16.255692948188,0,0,0,0,0,0,9.97191735357379,10.6288557159175,11.0675544065084,38.9612925177468,38.5433462562586,31.1666436837366,52.779560676982,54.4141358911886,39.541201973614,81.3501629169896,73.187884067885,55.1277340193284,97.8154133895312,67.1141051106244,70.708186736687,74.8098127198462,47.7658665852031,43.3364757101894,72.4733007239028,62.4955083632467,45.3941438579071,92.4373354960126,85.3671212022409,64.5730497057032,58.3836801330487,67.8176435913548,45.6060483069983,58.0418477257168,64.1145303900988,32.3867569477699,72.6108642591988,58.9275697814828,69.9348079950475,54.4859552370032,70.3410284736249,51.8998315403051,10.985274888221,13.8192794977278,10.9022495664355,11.9068349015285,11.263266963113,10.6078887220073,21.9459812680761,19.4938343655108,18.449079530228,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,4.48406850385229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.710331756132051,0,0.201606743224732,0,0,0,1.34140171940727,0,0,0,0,0,0,0,0,0,3.66741411393595,0,0,3.57002133020152,5.04976238167875,2.6591592103773,1.43094374583205,1.14398982156026,0.371457501329565,0.39752481473341,0.860234595106124,0.694281003215189,0,3.35599548967925,0,0.208994966536811,0.775250277507987,2.49036383880697,0,0.402829317109147,1.52054421143703,0.24406205754817,1.10298924103761,0,0.0892997282840798,0.673588117878509,0.563057402416611,0,0.949265659568129,0.916008719652036,205.577451200259,108.578473961531,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,3.69077727312324,1.40241773803446,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0.951270761172991,0,0,13.7881523408942,7.48813648445561,5.35072184239422,0,0,0,0,0,0,81.2894342528307,50.627849557605,35.453107757472,29.6887104038941,25.1222442518496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.1358476115929,22.0993120230136,23.1917333431335,0,0,0,0.144781306667579,0,0,0,0.394061520403854,0,0.256686072559497,0,0,0,0.502548796003046,0,62.9165900115633,29.9161459204025,72.9371303647422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20304078368662,8.41285383192606,4.90946765895844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,1.19065593693561,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,3.57746442951761,0,0,0,0,6.08937131078603,4.58782324285425,4.5571774973933,8.5763439164804,7.4045209155515,7.13320642311989,3.7802200606668,3.17250070517708,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,0.456469358066384,0.156679895773023,2.50634477090067,0,0,0,0,1.71752672377882,0,0,0,0.19538809540204,0,0,0,0.33307196799782,2.81974010175699,0,5.42080263306008,0,0.222886768554957,0,0.23874448473769,0.593929361665277,0,0.994147647766298,0.562677665642051,0,0,0,3.18796781201712,0.552567831062295,0,0,0,0,0,0,0,1.97286811273867,2.3948309234694,0,0.969332746095218,2.13366625772258,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.723578631752448,0,0.331737779793674,0.591095237907095,0.87754158861589,0,0,0.692552326534174,0.341826167541004,0,0.0897576444097721,0,0,0.183195186803725,1.06606955203727,0,0.156980256395025,0,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0.973033209536731,0.611030144933625,0,0,0,2.69604531922708,1.60515529459758,0.468528891450678,0,0,0,0.394584402849391,0,0,3.41207529993835,0,0,0,0,0,0,0.284609546029793,0,0,0,0,2.09672001890436,0,0,0,0,0.290967049465258,0,1.58186518546373,0,0.397429223405979,0.569797163602908,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.77976992559591,0,0,0,1.11712960508902,0.687481272035051,1.43574604915363,0.399358000997982,0.858452096273142,0.446342914883745,0.739018197353989,0,0,0,0,0,0,0,2.38568906942791,1.90684768556206,0,0,0,21.147545805841,17.7974449548328,0.668245123238271,0,0.788057072991982,0.786818822024972,0,0,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0.328370082997356,0,0,1.90517903781507,2.65013777824443,1.93924434542326,0.92562821219883,0,0,13.7755762212326,1.88645166119599,45.5662960881915,8.93098839261511,0,0,0,0.544017803369474,0.5013797880454,1.83807346058077,0.655745261419609,0,1.77213635993397,0.732157589411779,1.752673029891,1.72022758707021,0.998361463831671,4.03626619118992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0.276516872303462,15.7836850159905,16.0766456779169,25.5162015039117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,2.8339315265117,0.319267718114302,0.615349092722265,0,0.553258019713743,0.161475645631851,1.427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| ||
|short_description=p4@CXCL16 | |||
}} | }} |
Latest revision as of 06:04, 25 September 2015
Short description: | p4@CXCL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CXCL16_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 9bp_to_uc002fyq.3_5end |
EntrezGene: | CXCL16 |
HGNC: | 16642 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.01e-71 | 98 |
blood island | 1.01e-71 | 98 |
hemolymphoid system | 1.75e-66 | 108 |
bone marrow | 2.33e-62 | 76 |
bone element | 3.38e-56 | 82 |
immune system | 5.54e-56 | 93 |
skeletal element | 2.88e-49 | 90 |
skeletal system | 3.50e-42 | 100 |
lateral plate mesoderm | 8.11e-36 | 203 |
musculoskeletal system | 4.93e-20 | 167 |
mesoderm | 2.61e-16 | 315 |
mesoderm-derived structure | 2.61e-16 | 315 |
presumptive mesoderm | 2.61e-16 | 315 |
adult organism | 5.32e-15 | 114 |
blood | 2.36e-10 | 15 |
haemolymphatic fluid | 2.36e-10 | 15 |
organism substance | 2.36e-10 | 15 |
germ layer | 4.29e-09 | 560 |
germ layer / neural crest | 4.29e-09 | 560 |
embryonic tissue | 4.29e-09 | 560 |
presumptive structure | 4.29e-09 | 560 |
germ layer / neural crest derived structure | 4.29e-09 | 560 |
epiblast (generic) | 4.29e-09 | 560 |
embryonic structure | 8.38e-09 | 564 |
developing anatomical structure | 1.26e-07 | 581 |
embryo | 2.82e-07 | 592 |