FFCP PHASE1:Hg19::chr14:45565629..45565634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55015 | |EntrezGene=55015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20314 | |HGNC=20314 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1P0 | |UniProt=F5H1P0 | ||
|association_with_transcript=-240bp_to_ENST00000355846_5end | |association_with_transcript=-240bp_to_ENST00000355846_5end | ||
|cluster_id=chr14:45565629..45565634,+ | |||
|description=CAGE_peak_4_at_PRPF39_5end | |description=CAGE_peak_4_at_PRPF39_5end | ||
|id=chr14:45565629..45565634,+ | |id=chr14:45565629..45565634,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.41e-07!34;UBERON:0003528!5.41e-07!34;UBERON:0002619!9.27e-07!22 | |ontology_enrichment_uberon=UBERON:0002020!5.41e-07!34;UBERON:0003528!5.41e-07!34;UBERON:0002619!9.27e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;3.52e-50;2!UBERON:0002021;4.66e-21;5!UBERON:0001950;4.86e-20;20!UBERON:0002619;2.02e-18;22!UBERON:0000200;8.34e-18;6!UBERON:0000956;1.86e-16;25!UBERON:0000203;1.86e-16;25!UBERON:0001871;1.78e-15;6!UBERON:0001893;1.90e-14;34!UBERON:0002791;1.84e-13;32!UBERON:0001869;1.84e-13;32!UBERON:0003528;1.70e-11;34!UBERON:0002020;1.70e-11;34!UBERON:0002780;3.42e-07;41!UBERON:0001890;3.42e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,2.74e-50,2;UBERON:0002021,5.15e-21,5;UBERON:0001950,4.86e-20,20;UBERON:0002619,2.02e-18,22;UBERON:0000200,7.67e-18,6;UBERON:0000956,1.86e-16,25;UBERON:0000203,1.86e-16,25;UBERON:0001871,1.65e-15,6;UBERON:0002791,2.96e-13,32;UBERON:0001869,2.96e-13,32;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0001893,1.42e-12,34;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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| ||
|short_description=p4@PRPF39 | |short_description=p4@PRPF39 | ||
}} | }} |
Latest revision as of 01:13, 20 September 2015
Short description: | p4@PRPF39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRPF39_5end |
Coexpression cluster: | NA |
Association with transcript: | -240bp_to_ENST00000355846_5end |
EntrezGene: | PRPF39 |
HGNC: | 20314 |
UniProt: | F5H1P0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 2.74e-50 | 2 |
occipital lobe | 5.15e-21 | 5 |
neocortex | 4.86e-20 | 20 |
regional part of cerebral cortex | 2.02e-18 | 22 |
gyrus | 7.67e-18 | 6 |
cerebral cortex | 1.86e-16 | 25 |
pallium | 1.86e-16 | 25 |
temporal lobe | 1.65e-15 | 6 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |