FFCP PHASE1:Hg19::chr14:36983036..36983064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253970 | |EntrezGene=253970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18387 | |HGNC=18387 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000518529_5end | |association_with_transcript=-2bp_to_ENST00000518529_5end | ||
|cluster_id=chr14:36983036..36983064,- | |||
|coexpression_cluster_id=C1392 | |||
|description=CAGE_peak_2_at_SFTA3_5end | |description=CAGE_peak_2_at_SFTA3_5end | ||
|id=chr14:36983036..36983064,- | |id=chr14:36983036..36983064,- | ||
|ontology_enrichment_celltype=CL:0002553!1.22e-08!1;CL:0000167!4.11e-08!1;CL:0000164!4.11e-08!1;CL:0000502!4.11e-08!1;CL:0000172!4.11e-08!1;CL:0000173!4.11e-08!1;CL:0002351!4.11e-08!1 | |ontology_enrichment_celltype=CL:0002553!1.22e-08!1;CL:0000167!4.11e-08!1;CL:0000164!4.11e-08!1;CL:0000502!4.11e-08!1;CL:0000172!4.11e-08!1;CL:0000173!4.11e-08!1;CL:0002351!4.11e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002553;4.83e-14;1!CL:0000082;8.79e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,4.53e-14,1;CL:0000082,8.68e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.75e-23;5!UBERON:0008947;1.07e-20;29!UBERON:0001041;5.45e-20;30 | |||
|ontology_enrichment_disease=DOID:3112!3.10e-08!1;DOID:4430!4.11e-08!1;DOID:1324!8.34e-08!15;DOID:3905!1.17e-07!9;DOID:0050615!2.54e-07!16 | |ontology_enrichment_disease=DOID:3112!3.10e-08!1;DOID:4430!4.11e-08!1;DOID:1324!8.34e-08!15;DOID:3905!1.17e-07!9;DOID:0050615!2.54e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:1324;1.37e-13;15!DOID:3905;4.99e-13;9!DOID:0050615;9.33e-13;16!DOID:3908;6.15e-11;5!DOID:1325;5.10e-08;7!DOID:3904;5.10e-08;7!DOID:3910;1.54e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.35e-13,15;DOID:3905,4.99e-13,9;DOID:0050615,9.19e-13,16;DOID:3908,6.15e-11,5;DOID:1325,5.10e-08,7;DOID:3904,5.10e-08,7;DOID:3910,1.54e-07,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002048;1.98e-27;22!UBERON:0000117;1.98e-27;22!UBERON:0000171;1.98e-27;22!UBERON:0000170;1.98e-27;22!UBERON:0000341;1.35e-25;2!UBERON:0002046;3.75e-23;5!UBERON:0005178;4.59e-15;34!UBERON:0002224;4.59e-15;34!UBERON:0002171;3.50e-14;1!UBERON:0006518;3.50e-14;1!UBERON:0008949;3.50e-14;1!UBERON:0000101;3.50e-14;1!UBERON:0002167;3.50e-14;1!UBERON:0005181;1.15e-13;35!UBERON:0004802;8.79e-11;19!UBERON:0000115;8.79e-11;19!UBERON:0000065;3.51e-10;44!UBERON:0004807;2.42e-09;22!UBERON:0000974;3.49e-09;6!UBERON:0004903;1.54e-07;2!UBERON:0002173;1.54e-07;2!UBERON:0002186;1.54e-07;2!UBERON:0000915;1.90e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.98e-27,22;UBERON:0000117,1.98e-27,22;UBERON:0000171,1.98e-27,22;UBERON:0000170,1.98e-27,22;UBERON:0005597,1.98e-27,22;UBERON:0000118,1.98e-27,22;UBERON:0000341,1.44e-25,2;UBERON:0002046,3.47e-23,5;UBERON:0004117,3.47e-23,5;UBERON:0007689,3.47e-23,5;UBERON:0007123,3.47e-23,5;UBERON:0003091,3.47e-23,5;UBERON:0005153,7.43e-21,37;UBERON:0005178,1.41e-17,34;UBERON:0002224,1.41e-17,34;UBERON:0005911,3.91e-17,82;UBERON:0005181,4.63e-17,35;UBERON:0005157,2.93e-16,47;UBERON:0008947,1.13e-15,38;UBERON:0003258,1.13e-15,38;UBERON:0002171,3.50e-14,1;UBERON:0006518,3.50e-14,1;UBERON:0008949,3.50e-14,1;UBERON:0000101,3.50e-14,1;UBERON:0002167,3.50e-14,1;UBERON:0000915,2.67e-11,52;UBERON:0009722,6.98e-11,11;UBERON:0007690,6.98e-11,11;UBERON:0000065,7.37e-11,54;UBERON:0004802,8.68e-11,19;UBERON:0000115,8.68e-11,19;UBERON:0001007,5.17e-09,145;UBERON:0001555,5.17e-09,145;UBERON:0007026,5.17e-09,145;UBERON:0004119,4.88e-08,160;UBERON:0000925,4.88e-08,160;UBERON:0006595,4.88e-08,160;UBERON:0001004,9.33e-08,74;UBERON:0004903,1.54e-07,2;UBERON:0002173,1.54e-07,2;UBERON:0002186,1.54e-07,2;UBERON:0004807,2.19e-07,28;UBERON:0008814,7.53e-07,18 | |||
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|short_description=p2@SFTA3 | |short_description=p2@SFTA3 | ||
}} | }} |
Latest revision as of 22:21, 19 September 2015
Short description: | p2@SFTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFTA3_5end |
Coexpression cluster: | C1392_lung_thyroid_chorionic_epididymis_throat_seminal_tonsil |
Association with transcript: | -2bp_to_ENST00000518529_5end |
EntrezGene: | SFTA3 |
HGNC: | 18387 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 4.53e-14 | 1 |
epithelial cell of lung | 8.68e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.35e-13 | 15 |
lung carcinoma | 4.99e-13 | 9 |
respiratory system cancer | 9.19e-13 | 16 |
non-small cell lung carcinoma | 6.15e-11 | 5 |
bronchus cancer | 5.10e-08 | 7 |
bronchogenic carcinoma | 5.10e-08 | 7 |
lung adenocarcinoma | 1.54e-07 | 2 |