FFCP PHASE1:Hg19::chr12:7060473..7060507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5777 | |EntrezGene=5777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9658 | |HGNC=9658 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000416215,ENST00000540740_5end | |association_with_transcript=-11bp_to_ENST00000416215,ENST00000540740_5end | ||
|cluster_id=chr12:7060473..7060507,+ | |||
|coexpression_cluster_id=C1172 | |||
|description=CAGE_peak_2_at_PTPN6_5end | |description=CAGE_peak_2_at_PTPN6_5end | ||
|id=chr12:7060473..7060507,+ | |id=chr12:7060473..7060507,+ | ||
|ontology_enrichment_celltype=CL:0000037!5.60e-87!172;CL:0000566!5.60e-87!172;CL:0002032!1.05e-81!165;CL:0000837!1.05e-81!165;CL:0000988!2.72e-78!182;CL:0000738!5.90e-74!140;CL:0002031!2.02e-61!124;CL:0002087!4.58e-58!119;CL:0000763!2.30e-53!112;CL:0000049!2.30e-53!112;CL:0000766!2.89e-40!76;CL:0000557!1.82e-36!71;CL:0000839!6.73e-35!70;CL:0002009!1.92e-32!65;CL:0002194!5.16e-31!63;CL:0000576!5.16e-31!63;CL:0000040!5.16e-31!63;CL:0000559!5.16e-31!63;CL:0002057!2.34e-25!42;CL:0000542!2.52e-23!53;CL:0000051!2.52e-23!53;CL:0000838!7.86e-23!52;CL:0000860!2.24e-22!45;CL:0000134!3.08e-13!358;CL:0002320!4.72e-12!365;CL:0000084!1.13e-11!25;CL:0000827!1.13e-11!25;CL:0000945!2.37e-11!24;CL:0000826!2.37e-11!24;CL:0000791!5.37e-10!18;CL:0000789!5.37e-10!18;CL:0002420!5.37e-10!18;CL:0002419!5.37e-10!18;CL:0000790!5.37e-10!18;CL:0000219!8.21e-09!390;CL:0000451!2.23e-08!10;CL:0000990!2.85e-07!8;CL:0000236!4.18e-07!14;CL:0002393!6.07e-07!9;CL:0002397!6.07e-07!9;CL:0000625!8.07e-07!11;CL:0000094!9.24e-07!8 | |ontology_enrichment_celltype=CL:0000037!5.60e-87!172;CL:0000566!5.60e-87!172;CL:0002032!1.05e-81!165;CL:0000837!1.05e-81!165;CL:0000988!2.72e-78!182;CL:0000738!5.90e-74!140;CL:0002031!2.02e-61!124;CL:0002087!4.58e-58!119;CL:0000763!2.30e-53!112;CL:0000049!2.30e-53!112;CL:0000766!2.89e-40!76;CL:0000557!1.82e-36!71;CL:0000839!6.73e-35!70;CL:0002009!1.92e-32!65;CL:0002194!5.16e-31!63;CL:0000576!5.16e-31!63;CL:0000040!5.16e-31!63;CL:0000559!5.16e-31!63;CL:0002057!2.34e-25!42;CL:0000542!2.52e-23!53;CL:0000051!2.52e-23!53;CL:0000838!7.86e-23!52;CL:0000860!2.24e-22!45;CL:0000134!3.08e-13!358;CL:0002320!4.72e-12!365;CL:0000084!1.13e-11!25;CL:0000827!1.13e-11!25;CL:0000945!2.37e-11!24;CL:0000826!2.37e-11!24;CL:0000791!5.37e-10!18;CL:0000789!5.37e-10!18;CL:0002420!5.37e-10!18;CL:0002419!5.37e-10!18;CL:0000790!5.37e-10!18;CL:0000219!8.21e-09!390;CL:0000451!2.23e-08!10;CL:0000990!2.85e-07!8;CL:0000236!4.18e-07!14;CL:0002393!6.07e-07!9;CL:0002397!6.07e-07!9;CL:0000625!8.07e-07!11;CL:0000094!9.24e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.15e-22;39!CL:0000234;1.15e-22;39!CL:0000576;1.34e-21;48!CL:0000860;4.62e-21;33!CL:0002057;4.62e-21;33!CL:0000766;4.80e-21;69!CL:0000738;1.61e-18;136!CL:0002087;2.50e-18;104!CL:0000763;6.50e-18;100!CL:0000988;9.90e-16;177!CL:0000542;5.00e-14;53!CL:0000084;1.41e-13;25!CL:0000791;1.78e-11;18!CL:0000789;1.78e-11;18!CL:0002419;1.78e-11;18!CL:0000945;2.05e-10;24!CL:0000451;1.56e-09;10!CL:0000990;3.37e-08;8!CL:0000219;4.08e-08;193!CL:0000625;9.42e-08;11!CL:0000094;1.29e-07;8!CL:0000236;2.07e-07;13!CL:0000235;2.56e-07;6!CL:0000840;7.22e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.86e-99,168;CL:0002032,2.50e-93,161;CL:0000837,2.50e-93,161;CL:0000988,1.94e-91,177;CL:0000738,5.12e-88,136;CL:0002031,3.65e-72,120;CL:0002087,2.53e-69,115;CL:0000763,2.08e-63,108;CL:0000049,2.08e-63,108;CL:0000766,5.64e-52,72;CL:0000557,2.01e-47,67;CL:0000839,2.32e-44,66;CL:0002009,1.28e-42,61;CL:0002194,6.72e-41,59;CL:0000576,6.72e-41,59;CL:0000040,6.72e-41,59;CL:0000559,6.72e-41,59;CL:0000473,3.19e-35,48;CL:0000234,3.19e-35,48;CL:0000860,2.13e-29,42;CL:0002057,2.13e-29,42;CL:0000542,2.09e-24,53;CL:0000051,2.09e-24,53;CL:0000838,7.79e-24,52;CL:0000134,2.02e-20,354;CL:0002320,4.19e-19,361;CL:0000219,1.36e-14,386;CL:0000084,1.66e-13,25;CL:0000827,1.66e-13,25;CL:0000791,2.01e-11,18;CL:0000789,2.01e-11,18;CL:0002420,2.01e-11,18;CL:0002419,2.01e-11,18;CL:0000790,2.01e-11,18;CL:0000945,2.06e-10,24;CL:0000826,2.06e-10,24;CL:0000451,1.56e-09,10;CL:0000048,1.88e-09,427;CL:0000034,5.75e-09,441;CL:0000723,8.66e-09,433;CL:0000990,3.05e-08,8;CL:0000236,4.78e-08,14;CL:0002393,7.38e-08,9;CL:0002397,7.38e-08,9;CL:0000625,1.03e-07,11;CL:0000094,1.20e-07,8;CL:0000235,2.61e-07,6;CL:0000840,6.76e-07,5;CL:0001029,6.76e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.19e-21;42!CL:0000049;1.20e-16;108!CL:0000051;5.00e-14;53!CL:0000790;1.78e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!9.23e-15!51;DOID:0060083!9.23e-15!51;DOID:1240!6.54e-14!39;DOID:8692!1.06e-10!31 | |ontology_enrichment_disease=DOID:2531!9.23e-15!51;DOID:0060083!9.23e-15!51;DOID:1240!6.54e-14!39;DOID:8692!1.06e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;6.85e-11;39!DOID:8692;4.83e-10;31!DOID:2531;1.64e-08;51!DOID:0060083;1.64e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.00e-14,39;DOID:2531,1.28e-13,51;DOID:0060083,1.28e-13,51;DOID:8692,1.41e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.08e-41!102;UBERON:0003061!1.08e-41!102;UBERON:0002193!5.45e-37!112;UBERON:0002371!5.01e-31!80;UBERON:0001474!8.82e-27!86;UBERON:0002405!1.32e-22!115;UBERON:0007023!2.45e-22!115;UBERON:0004765!2.97e-19!101;UBERON:0001434!2.97e-19!101;UBERON:0002384!4.08e-11!375;UBERON:0003081!1.24e-07!216;UBERON:0000178!1.46e-07!15;UBERON:0000179!1.46e-07!15;UBERON:0000463!1.46e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!1.08e-41!102;UBERON:0003061!1.08e-41!102;UBERON:0002193!5.45e-37!112;UBERON:0002371!5.01e-31!80;UBERON:0001474!8.82e-27!86;UBERON:0002405!1.32e-22!115;UBERON:0007023!2.45e-22!115;UBERON:0004765!2.97e-19!101;UBERON:0001434!2.97e-19!101;UBERON:0002384!4.08e-11!375;UBERON:0003081!1.24e-07!216;UBERON:0000178!1.46e-07!15;UBERON:0000179!1.46e-07!15;UBERON:0000463!1.46e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.11e-09;15!UBERON:0000179;6.11e-09;15!UBERON:0000463;6.11e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.62e-53,98;UBERON:0003061,4.62e-53,98;UBERON:0002193,7.39e-48,108;UBERON:0002371,4.75e-40,76;UBERON:0002405,2.60e-39,93;UBERON:0001474,3.70e-35,82;UBERON:0004765,1.04e-29,90;UBERON:0001434,3.25e-24,100;UBERON:0002384,8.64e-18,371;UBERON:0003081,1.63e-12,203;UBERON:0000178,6.10e-09,15;UBERON:0000179,6.10e-09,15;UBERON:0000463,6.10e-09,15;UBERON:0007023,1.41e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,15.2826811495903,11.9045854702421,12.9872789167571,9.04737836752479,4.98978217526377,7.7408061658038,0,0,0,0.619737604642413,0.995184627411951,7.34001098337118,9.41792194504192,11.8321224007384,10.199510923645,19.7045617331133,17.8141516310439,15.4545340580512,13.9582309228382,9.44689859222024,16.2531320995837,16.7348906572093,9.45686142450199,15.1756121738601,15.5353891853961,15.1134816852169,9.45928919554341,9.3081333798887,6.45484683583826,8.12558919566051,17.5065375774622,8.46009065179322,5.8428105955722,9.18251677112708,6.73950956859797,7.03270838378945,17.8119702100827,17.353338213082,14.4916415181116,6.09439401120026,7.37600792098482,6.22822248995575,19.0948985595125,11.9941071236646,10.8594422352558,6.05399502633369,1.47311054395026,2.84816148696796,14.365359469212,15.9453224973783,13.8374706035528,25.3862706391079,21.1749418906524,16.072558669708,12.8255734683562,12.1339173091445,9.86386430329023,15.839662001519,8.19207916893197,7.11607403090844,6.82768356106412,6.80673177961221,6.8970292794538,7.27149360063348,11.4486450544244,2.27685187643779,1.17447437874188,4.58727873750275,6.60856642895129,6.1655941927969,6.847986204152,4.72103448273199,5.10913991573914,8.42966145897988,13.7092926220356,12.3850461320764,10.4158517261641,9.74133642039557,11.1410456885174,11.7842362989935,14.1781692533518,11.9153700056607,13.4495885711959,15.3470030120656,16.9371041741786,20.7262513339386,11.302320343667,12.9009309950993,12.8419597483062,15.6803285707465,10.6510782135712,10.3469533272519,14.0887252647878,6.83153168452658,9.5569624297229,5.85975108470777,13.3063286222772,9.18508226374414,9.98295567004463,14.9916871862815,14.206635122641,8.21127996921047,6.04820229674197,4.54648332831962,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.37528029272598,0,0,23.3674123431372,27.8607579678828,26.9904659853296,12.8784937124885,12.0118931263827,10.0293525358983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,15.511210565933,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,15.0097453800981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1746625235162,31.1225672635186,27.1995026988373,0,0,0,0,0,0,4.92663237895944,15.3204275183013,25.9160144425965,22.482712733046,29.0357596880674,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2435670961786,18.5835123829887,18.9750545534728,0,0,0,0,0,0,5.71634234366989,3.74358444383662,4.52817907204986,5.77543663258868,0,0,0.773288812777695,0.502548796003046,0,21.7212036944683,50.8574480646842,40.1983048032954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1993135412504,11.6485668442053,9.92566287572032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.784306353074702,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0,24.3574852431441,33.6440371142645,36.4574199791464,24.5378728721523,27.1499100236888,29.829772314865,24.8414461129533,25.3800056414167,0,0,0,8.9185524060345,2.30830740762312,12.5209644293209,5.57991954550878,6.38653988585013,12.8308597988686,13.1237621288807,5.51857298466744,7.86232098717685,2.51058146936511,11.5943122872037,7.51903431270201,12.358299779517,9.95646065642937,13.9241797961823,14.4787720814711,12.3661924112075,4.91585222893533,6.26293102098765,4.83862510964535,14.2633309643489,0,2.46174797895425,9.19549306818343,0.33307196799782,1.4098700508785,0,2.4906390476222,0,2.11742430127209,0,0,0.296964680832639,0,1.9882952955326,1.54736358051564,0,0,0,0.996239941255349,11.0513566212459,0,0,20.5551625119986,0,0,0,22.5091842899824,0.493217028184668,16.7638164642858,0,0.969332746095218,0.185536196323703,0,0,0,2.17499872630438,0,0,0,0,0,0,2.65722415744152,1.4471572635049,1.52581736317083,0.221158519862449,1.18219047581419,0.219385397153973,0,0,0.769502585037971,0,0,0,0,1.27600463892768,0.0915975934018623,0,7.15353087370155,7.22109179417114,10.3051242778097,0.225595660617181,0,0.167821586975843,0,4.13235105348985,0,0,0,0,0,0.884575645033392,0,0,0,0,1.88723172345896,1.60515529459758,1.63985112007737,2.00700268137233,0,0,0,1.20990716048664,0,4.10712767585172,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,1.64881328030313,0,0.677942222341597,0,0,0.823040347426423,0,0,1.92107695265417,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,3.55953985119182,3.83239764200917,0,9.72683210833464,0.558564802544508,0.229160424011684,1.43574604915363,0.199679000498991,0,1.33902874465124,1.00775208730089,0,0,0,0,0,0,7.70527321798639,2.38568906942791,2.04305109167363,0,0,0,10.5737729029205,26.3092664549703,1.03274246318642,0,0.630445658393585,0.734364233889974,0,0,0,0,0,0,0,0,0,0,3.77625595446959,0,0,0.58620893471233,5.30027555648885,1.163546607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| ||
|short_description=p2@PTPN6 | |short_description=p2@PTPN6 | ||
}} | }} |
Latest revision as of 08:13, 20 September 2015
Short description: | p2@PTPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPN6_5end |
Coexpression cluster: | C1172_Neutrophils_Whole_CD14_CD14CD16_Eosinophils_CD19_Dendritic |
Association with transcript: | -11bp_to_ENST00000416215, ENST00000540740_5end |
EntrezGene: | PTPN6 |
HGNC: | 9658 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.62e-53 | 98 |
blood island | 4.62e-53 | 98 |
hemolymphoid system | 7.39e-48 | 108 |
bone marrow | 4.75e-40 | 76 |
immune system | 2.60e-39 | 93 |
bone element | 3.70e-35 | 82 |
skeletal element | 1.04e-29 | 90 |
skeletal system | 3.25e-24 | 100 |
connective tissue | 8.64e-18 | 371 |
lateral plate mesoderm | 1.63e-12 | 203 |
blood | 6.10e-09 | 15 |
haemolymphatic fluid | 6.10e-09 | 15 |
organism substance | 6.10e-09 | 15 |
adult organism | 1.41e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.00e-14 | 39 |
hematologic cancer | 1.28e-13 | 51 |
immune system cancer | 1.28e-13 | 51 |
myeloid leukemia | 1.41e-10 | 31 |