FFCP PHASE1:Hg19::chr12:122985494..122985543,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55596 | |EntrezGene=55596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25265 | |HGNC=25265 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NZY4 | |UniProt=Q6NZY4 | ||
|association_with_transcript=0bp_to_ENST00000336229,NM_017612,uc001ucn.2_5end | |association_with_transcript=0bp_to_ENST00000336229,NM_017612,uc001ucn.2_5end | ||
|cluster_id=chr12:122985494..122985543,- | |||
|description=CAGE_peak_2_at_ZCCHC8_5end | |description=CAGE_peak_2_at_ZCCHC8_5end | ||
|id=chr12:122985494..122985543,- | |id=chr12:122985494..122985543,- | ||
|ontology_enrichment_celltype=CL:0000791!9.61e-08!18;CL:0000789!9.61e-08!18;CL:0002420!9.61e-08!18;CL:0002419!9.61e-08!18;CL:0000790!9.61e-08!18;CL:0000838!1.71e-07!52;CL:0000542!2.16e-07!53;CL:0000051!2.16e-07!53 | |ontology_enrichment_celltype=CL:0000791!9.61e-08!18;CL:0000789!9.61e-08!18;CL:0002420!9.61e-08!18;CL:0002419!9.61e-08!18;CL:0000790!9.61e-08!18;CL:0000838!1.71e-07!52;CL:0000542!2.16e-07!53;CL:0000051!2.16e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.04e-07;18!CL:0000789;1.04e-07;18!CL:0002419;1.04e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.61e-08,18;CL:0000789,9.61e-08,18;CL:0002420,9.61e-08,18;CL:0002419,9.61e-08,18;CL:0000790,9.61e-08,18;CL:0000838,1.69e-07,52;CL:0000542,2.13e-07,53;CL:0000051,2.13e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.04e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-24!115;UBERON:0001049!7.94e-16!57;UBERON:0005068!7.94e-16!57;UBERON:0006241!7.94e-16!57;UBERON:0007135!7.94e-16!57;UBERON:0003080!5.56e-13!42;UBERON:0002780!1.79e-12!41;UBERON:0001890!1.79e-12!41;UBERON:0006240!1.79e-12!41;UBERON:0000073!8.41e-12!94;UBERON:0001016!8.41e-12!94;UBERON:0002616!1.24e-11!59;UBERON:0001017!8.53e-11!82;UBERON:0002346!9.08e-11!90;UBERON:0002020!1.09e-10!34;UBERON:0003528!1.09e-10!34;UBERON:0005743!1.32e-10!86;UBERON:0003075!2.48e-10!86;UBERON:0007284!2.48e-10!86;UBERON:0002791!2.98e-10!33;UBERON:0001893!3.42e-10!34;UBERON:0000955!5.46e-10!69;UBERON:0006238!5.46e-10!69;UBERON:0001869!1.91e-09!32;UBERON:0003056!4.50e-08!61;UBERON:0002619!3.82e-07!22;UBERON:0000956!5.87e-07!25;UBERON:0000203!5.87e-07!25;UBERON:0000153!7.68e-07!129;UBERON:0007811!7.68e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!1.51e-24!115;UBERON:0001049!7.94e-16!57;UBERON:0005068!7.94e-16!57;UBERON:0006241!7.94e-16!57;UBERON:0007135!7.94e-16!57;UBERON:0003080!5.56e-13!42;UBERON:0002780!1.79e-12!41;UBERON:0001890!1.79e-12!41;UBERON:0006240!1.79e-12!41;UBERON:0000073!8.41e-12!94;UBERON:0001016!8.41e-12!94;UBERON:0002616!1.24e-11!59;UBERON:0001017!8.53e-11!82;UBERON:0002346!9.08e-11!90;UBERON:0002020!1.09e-10!34;UBERON:0003528!1.09e-10!34;UBERON:0005743!1.32e-10!86;UBERON:0003075!2.48e-10!86;UBERON:0007284!2.48e-10!86;UBERON:0002791!2.98e-10!33;UBERON:0001893!3.42e-10!34;UBERON:0000955!5.46e-10!69;UBERON:0006238!5.46e-10!69;UBERON:0001869!1.91e-09!32;UBERON:0003056!4.50e-08!61;UBERON:0002619!3.82e-07!22;UBERON:0000956!5.87e-07!25;UBERON:0000203!5.87e-07!25;UBERON:0000153!7.68e-07!129;UBERON:0007811!7.68e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.14e-09;41!UBERON:0001890;1.14e-09;41!UBERON:0002791;2.98e-09;32!UBERON:0003528;3.59e-09;34!UBERON:0002020;3.59e-09;34!UBERON:0000073;7.05e-09;53!UBERON:0002616;7.05e-09;53!UBERON:0001869;1.03e-08;32!UBERON:0001893;1.35e-08;34!UBERON:0007023;9.18e-08;114!UBERON:0002619;4.00e-07;22!UBERON:0000956;5.59e-07;25!UBERON:0000203;5.59e-07;25!UBERON:0000922;7.95e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.17e-24,114;UBERON:0001049,2.56e-15,56;UBERON:0005068,2.56e-15,56;UBERON:0006241,2.56e-15,56;UBERON:0007135,2.56e-15,56;UBERON:0000073,6.17e-14,53;UBERON:0002616,6.17e-14,53;UBERON:0002780,1.79e-12,41;UBERON:0001890,1.79e-12,41;UBERON:0003080,1.79e-12,41;UBERON:0006240,1.79e-12,41;UBERON:0001016,1.39e-11,89;UBERON:0002346,1.52e-11,86;UBERON:0003075,4.13e-11,82;UBERON:0007284,4.13e-11,82;UBERON:0003528,1.09e-10,34;UBERON:0002020,1.09e-10,34;UBERON:0001017,2.15e-10,81;UBERON:0001893,3.41e-10,34;UBERON:0002791,5.90e-10,32;UBERON:0000955,1.40e-09,68;UBERON:0006238,1.40e-09,68;UBERON:0001869,1.91e-09,32;UBERON:0010371,1.16e-08,104;UBERON:0003056,5.31e-08,61;UBERON:0002619,3.82e-07,22;UBERON:0000956,5.87e-07,25;UBERON:0000203,5.87e-07,25 | |||
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| ||
|short_description=p2@ZCCHC8 | |short_description=p2@ZCCHC8 | ||
}} | }} |
Latest revision as of 00:14, 17 September 2015
Short description: | p2@ZCCHC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZCCHC8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000336229, NM_017612, uc001ucn.2_5end |
EntrezGene: | ZCCHC8 |
HGNC: | 25265 |
UniProt: | Q6NZY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.61e-08 | 18 |
alpha-beta T cell | 9.61e-08 | 18 |
immature T cell | 9.61e-08 | 18 |
mature T cell | 9.61e-08 | 18 |
immature alpha-beta T cell | 9.61e-08 | 18 |
lymphoid lineage restricted progenitor cell | 1.69e-07 | 52 |
lymphocyte | 2.13e-07 | 53 |
common lymphoid progenitor | 2.13e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.17e-24 | 114 |
neural tube | 2.56e-15 | 56 |
neural rod | 2.56e-15 | 56 |
future spinal cord | 2.56e-15 | 56 |
neural keel | 2.56e-15 | 56 |
regional part of nervous system | 6.17e-14 | 53 |
regional part of brain | 6.17e-14 | 53 |
regional part of forebrain | 1.79e-12 | 41 |
forebrain | 1.79e-12 | 41 |
anterior neural tube | 1.79e-12 | 41 |
future forebrain | 1.79e-12 | 41 |
nervous system | 1.39e-11 | 89 |
neurectoderm | 1.52e-11 | 86 |
neural plate | 4.13e-11 | 82 |
presumptive neural plate | 4.13e-11 | 82 |
brain grey matter | 1.09e-10 | 34 |
gray matter | 1.09e-10 | 34 |
central nervous system | 2.15e-10 | 81 |
telencephalon | 3.41e-10 | 34 |
regional part of telencephalon | 5.90e-10 | 32 |
brain | 1.40e-09 | 68 |
future brain | 1.40e-09 | 68 |
cerebral hemisphere | 1.91e-09 | 32 |
ecto-epithelium | 1.16e-08 | 104 |
pre-chordal neural plate | 5.31e-08 | 61 |
regional part of cerebral cortex | 3.82e-07 | 22 |
cerebral cortex | 5.87e-07 | 25 |
pallium | 5.87e-07 | 25 |