FFCP PHASE1:Hg19::chr12:111107001..111107019,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:111107001..111107019,- | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_at_chr12:111107001..111107019,- | |description=CAGE_peak_at_chr12:111107001..111107019,- | ||
|id=chr12:111107001..111107019,- | |id=chr12:111107001..111107019,- | ||
|ontology_enrichment_celltype=CL:0000945!4.10e-83!24;CL:0000826!4.10e-83!24;CL:0000236!6.15e-55!14;CL:0000542!1.67e-38!53;CL:0000051!1.67e-38!53;CL:0000838!1.28e-35!52;CL:0000738!1.11e-19!140;CL:0002087!8.05e-19!119;CL:0002031!3.50e-16!124;CL:0000037!7.44e-15!172;CL:0000566!7.44e-15!172;CL:0002032!2.04e-14!165;CL:0000837!2.04e-14!165;CL:0000988!1.07e-13!182;CL:0000785!1.04e-10!2;CL:0000955!1.04e-10!2;CL:0000818!1.04e-10!2;CL:0000954!1.04e-10!2;CL:0000816!1.04e-10!2;CL:0000817!2.09e-07!3 | |ontology_enrichment_celltype=CL:0000945!4.10e-83!24;CL:0000826!4.10e-83!24;CL:0000236!6.15e-55!14;CL:0000542!1.67e-38!53;CL:0000051!1.67e-38!53;CL:0000838!1.28e-35!52;CL:0000738!1.11e-19!140;CL:0002087!8.05e-19!119;CL:0002031!3.50e-16!124;CL:0000037!7.44e-15!172;CL:0000566!7.44e-15!172;CL:0002032!2.04e-14!165;CL:0000837!2.04e-14!165;CL:0000988!1.07e-13!182;CL:0000785!1.04e-10!2;CL:0000955!1.04e-10!2;CL:0000818!1.04e-10!2;CL:0000954!1.04e-10!2;CL:0000816!1.04e-10!2;CL:0000817!2.09e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.54e-107;24!CL:0000236;1.13e-70;13!CL:0000542;2.36e-30;53!CL:0000785;3.99e-13;1!CL:0000819;3.99e-13;1!CL:0000946;7.68e-13;1!CL:0000786;7.68e-13;1!CL:0002087;1.88e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.54e-107,24;CL:0000826,3.54e-107,24;CL:0000236,7.09e-81,14;CL:0000542,2.46e-54,53;CL:0000051,2.46e-54,53;CL:0000838,1.26e-48,52;CL:0000785,3.76e-24,2;CL:0000955,3.76e-24,2;CL:0000818,3.76e-24,2;CL:0000954,3.76e-24,2;CL:0000816,3.76e-24,2;CL:0002087,7.28e-24,115;CL:0000738,6.45e-20,136;CL:0002031,6.82e-20,120;CL:0002032,1.52e-16,161;CL:0000837,1.52e-16,161;CL:0000817,1.88e-16,3;CL:0000037,8.88e-16,168;CL:0000988,7.02e-15,177;CL:0000819,4.23e-13,1;CL:0000946,7.68e-13,1;CL:0000786,7.68e-13,1;CL:0000980,7.68e-13,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.36e-30;53!CL:0000954;3.54e-24;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.52e-11!10 | |ontology_enrichment_disease=DOID:0060058!1.52e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:630;1.61e-13;1!DOID:0050177;1.61e-13;1!DOID:0050427;1.61e-13;1!DOID:0060073;3.99e-13;1!DOID:8675;3.99e-13;1!DOID:12603;7.68e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.61e-13,1;DOID:0050177,1.61e-13,1;DOID:0050427,1.61e-13,1;DOID:0060073,4.23e-13,1;DOID:8675,4.23e-13,1;DOID:12603,8.64e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.87e-16!7;UBERON:0002106!1.21e-14!3;UBERON:0004854!1.21e-14!3;UBERON:0009034!1.21e-14!3;UBERON:0002095!1.21e-14!3;UBERON:0004782!1.21e-14!3;UBERON:0003281!1.21e-14!3;UBERON:0009664!1.21e-14!3;UBERON:0002296!1.21e-14!3;UBERON:0005602!1.21e-14!3;UBERON:0001179!1.21e-14!3;UBERON:0006293!1.21e-14!3 | |ontology_enrichment_uberon=UBERON:0004177!6.87e-16!7;UBERON:0002106!1.21e-14!3;UBERON:0004854!1.21e-14!3;UBERON:0009034!1.21e-14!3;UBERON:0002095!1.21e-14!3;UBERON:0004782!1.21e-14!3;UBERON:0003281!1.21e-14!3;UBERON:0009664!1.21e-14!3;UBERON:0002296!1.21e-14!3;UBERON:0005602!1.21e-14!3;UBERON:0001179!1.21e-14!3;UBERON:0006293!1.21e-14!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:111107001..111107019,- | |short_description=p@chr12:111107001..111107019,- | ||
}} | }} |
Latest revision as of 04:56, 24 July 2015
Short description: | p@chr12:111107001..111107019, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111107001..111107019, - |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.54e-107 | 24 |
pro-B cell | 3.54e-107 | 24 |
B cell | 7.09e-81 | 14 |
lymphocyte | 2.46e-54 | 53 |
common lymphoid progenitor | 2.46e-54 | 53 |
lymphoid lineage restricted progenitor cell | 1.26e-48 | 52 |
mature B cell | 3.76e-24 | 2 |
pre-B-II cell | 3.76e-24 | 2 |
transitional stage B cell | 3.76e-24 | 2 |
small pre-B-II cell | 3.76e-24 | 2 |
immature B cell | 3.76e-24 | 2 |
nongranular leukocyte | 7.28e-24 | 115 |
leukocyte | 6.45e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 6.82e-20 | 120 |
hematopoietic oligopotent progenitor cell | 1.52e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-16 | 161 |
precursor B cell | 1.88e-16 | 3 |
hematopoietic stem cell | 8.88e-16 | 168 |
hematopoietic cell | 7.02e-15 | 177 |
B-1 B cell | 4.23e-13 | 1 |
antibody secreting cell | 7.68e-13 | 1 |
plasma cell | 7.68e-13 | 1 |
plasmablast | 7.68e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.61e-13 | 1 |
monogenic disease | 1.61e-13 | 1 |
xeroderma pigmentosum | 1.61e-13 | 1 |
lymphatic system cancer | 4.23e-13 | 1 |
lymphosarcoma | 4.23e-13 | 1 |
acute leukemia | 8.64e-13 | 1 |