FFCP PHASE1:Hg19::chr11:62310952..62310964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:62310952..62310964,+ | |||
|coexpression_cluster_id=C489 | |||
|description=CAGE_peak_at_chr11:62310952..62310964,+ | |description=CAGE_peak_at_chr11:62310952..62310964,+ | ||
|id=chr11:62310952..62310964,+ | |id=chr11:62310952..62310964,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.12e-42!42;CL:0000738!5.59e-40!140;CL:0000860!1.27e-38!45;CL:0000557!4.16e-34!71;CL:0000766!1.44e-33!76;CL:0002031!9.32e-33!124;CL:0000037!1.10e-31!172;CL:0000566!1.10e-31!172;CL:0000988!1.21e-30!182;CL:0002087!1.78e-30!119;CL:0002032!4.28e-29!165;CL:0000837!4.28e-29!165;CL:0002009!1.83e-28!65;CL:0000839!1.42e-27!70;CL:0002194!7.20e-25!63;CL:0000576!7.20e-25!63;CL:0000040!7.20e-25!63;CL:0000559!7.20e-25!63;CL:0000763!9.65e-25!112;CL:0000049!9.65e-25!112;CL:0000134!8.54e-12!358;CL:0002320!2.61e-11!365;CL:0000767!9.47e-10!3;CL:0000623!9.75e-10!3;CL:0000825!9.75e-10!3;CL:0000219!1.32e-09!390;CL:0000791!5.49e-09!18;CL:0000789!5.49e-09!18;CL:0002420!5.49e-09!18;CL:0002419!5.49e-09!18;CL:0000790!5.49e-09!18;CL:0000842!2.72e-08!3;CL:0000048!3.62e-08!430;CL:0000034!4.74e-08!444;CL:0000624!5.99e-08!6;CL:0000723!7.15e-08!436;CL:0001014!1.99e-07!2;CL:0001016!1.99e-07!2;CL:0000080!4.80e-07!6 | |ontology_enrichment_celltype=CL:0002057!6.12e-42!42;CL:0000738!5.59e-40!140;CL:0000860!1.27e-38!45;CL:0000557!4.16e-34!71;CL:0000766!1.44e-33!76;CL:0002031!9.32e-33!124;CL:0000037!1.10e-31!172;CL:0000566!1.10e-31!172;CL:0000988!1.21e-30!182;CL:0002087!1.78e-30!119;CL:0002032!4.28e-29!165;CL:0000837!4.28e-29!165;CL:0002009!1.83e-28!65;CL:0000839!1.42e-27!70;CL:0002194!7.20e-25!63;CL:0000576!7.20e-25!63;CL:0000040!7.20e-25!63;CL:0000559!7.20e-25!63;CL:0000763!9.65e-25!112;CL:0000049!9.65e-25!112;CL:0000134!8.54e-12!358;CL:0002320!2.61e-11!365;CL:0000767!9.47e-10!3;CL:0000623!9.75e-10!3;CL:0000825!9.75e-10!3;CL:0000219!1.32e-09!390;CL:0000791!5.49e-09!18;CL:0000789!5.49e-09!18;CL:0002420!5.49e-09!18;CL:0002419!5.49e-09!18;CL:0000790!5.49e-09!18;CL:0000842!2.72e-08!3;CL:0000048!3.62e-08!430;CL:0000034!4.74e-08!444;CL:0000624!5.99e-08!6;CL:0000723!7.15e-08!436;CL:0001014!1.99e-07!2;CL:0001016!1.99e-07!2;CL:0000080!4.80e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.49e-20;3!CL:0000767;1.65e-20;3!CL:0000860;2.75e-20;33!CL:0002057;2.75e-20;33!CL:0000576;1.65e-16;48!CL:0001014;2.80e-15;2!CL:0001016;2.80e-15;2!CL:0000094;1.20e-13;8!CL:0000766;1.14e-12;69!CL:0000473;1.63e-12;39!CL:0000234;1.63e-12;39!CL:0002393;5.19e-11;6!CL:0002397;5.19e-11;6!CL:0000081;5.76e-10;11!CL:0000791;2.70e-09;18!CL:0000789;2.70e-09;18!CL:0002419;2.70e-09;18!CL:0002087;5.35e-09;104!CL:0002032;8.12e-08;1!CL:0000557;8.12e-08;1!CL:0000738;3.40e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.16e-36,136;CL:0002032,2.09e-32,161;CL:0000837,2.09e-32,161;CL:0000037,7.25e-31,168;CL:0002031,5.02e-30,120;CL:0000766,4.10e-29,72;CL:0000988,4.62e-29,177;CL:0000860,3.58e-28,42;CL:0002057,3.58e-28,42;CL:0000557,3.86e-28,67;CL:0000763,2.01e-25,108;CL:0000049,2.01e-25,108;CL:0002009,2.11e-24,61;CL:0000473,2.58e-24,48;CL:0000234,2.58e-24,48;CL:0002087,1.44e-23,115;CL:0000767,1.07e-20,3;CL:0000623,1.14e-20,3;CL:0000825,1.14e-20,3;CL:0000839,2.81e-19,66;CL:0002194,6.53e-19,59;CL:0000576,6.53e-19,59;CL:0000040,6.53e-19,59;CL:0000559,6.53e-19,59;CL:0001014,2.80e-15,2;CL:0001016,2.80e-15,2;CL:0000094,8.64e-14,8;CL:0000134,4.30e-12,354;CL:0002320,9.24e-12,361;CL:0000219,1.38e-10,386;CL:0000081,4.55e-10,11;CL:0000791,2.83e-09,18;CL:0000789,2.83e-09,18;CL:0002420,2.83e-09,18;CL:0002419,2.83e-09,18;CL:0000790,2.83e-09,18;CL:0000048,3.78e-09,427;CL:0000723,5.97e-09,433;CL:0000034,1.08e-08,441;CL:0002393,1.78e-07,9;CL:0002397,1.78e-07,9;CL:0000838,3.60e-07,52;CL:0000542,5.16e-07,53;CL:0000051,5.16e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-18;42!CL:0000790;2.70e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.79e-29!80;UBERON:0002390!3.96e-29!102;UBERON:0003061!3.96e-29!102;UBERON:0002193!3.59e-27!112;UBERON:0001474!1.27e-26!86;UBERON:0004765!2.30e-21!101;UBERON:0001434!2.30e-21!101;UBERON:0002405!2.84e-20!115;UBERON:0002384!1.20e-10!375;UBERON:0002204!1.88e-10!167;UBERON:0003081!3.68e-10!216 | |ontology_enrichment_uberon=UBERON:0002371!2.79e-29!80;UBERON:0002390!3.96e-29!102;UBERON:0003061!3.96e-29!102;UBERON:0002193!3.59e-27!112;UBERON:0001474!1.27e-26!86;UBERON:0004765!2.30e-21!101;UBERON:0001434!2.30e-21!101;UBERON:0002405!2.84e-20!115;UBERON:0002384!1.20e-10!375;UBERON:0002204!1.88e-10!167;UBERON:0003081!3.68e-10!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.96e-24,76;UBERON:0001474,2.07e-22,82;UBERON:0004765,3.98e-20,90;UBERON:0002405,2.27e-19,93;UBERON:0002390,3.27e-18,98;UBERON:0003061,3.27e-18,98;UBERON:0001434,8.83e-18,100;UBERON:0002193,3.26e-16,108;UBERON:0002384,2.63e-11,371;UBERON:0002204,2.86e-09,167;UBERON:0003081,5.12e-07,203 | |||
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| ||
|short_description=p@chr11:62310952..62310964,+ | |short_description=p@chr11:62310952..62310964,+ | ||
}} | }} |
Latest revision as of 23:39, 23 July 2015
Short description: | p@chr11:62310952..62310964, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62310952..62310964, + |
Coexpression cluster: | C489_immature_CD14_Natural_Basophils_CD8_CD4_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.96e-24 | 76 |
bone element | 2.07e-22 | 82 |
skeletal element | 3.98e-20 | 90 |
immune system | 2.27e-19 | 93 |
hematopoietic system | 3.27e-18 | 98 |
blood island | 3.27e-18 | 98 |
skeletal system | 8.83e-18 | 100 |
hemolymphoid system | 3.26e-16 | 108 |
connective tissue | 2.63e-11 | 371 |
musculoskeletal system | 2.86e-09 | 167 |
lateral plate mesoderm | 5.12e-07 | 203 |