FFCP PHASE1:Hg19::chr11:102193487..102193509,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:102193487..102193509,- | |||
|description=CAGE_peak_at_chr11:102193487..102193509,- | |description=CAGE_peak_at_chr11:102193487..102193509,- | ||
|id=chr11:102193487..102193509,- | |id=chr11:102193487..102193509,- | ||
|ontology_enrichment_celltype=CL:0000542!6.17e-11!53;CL:0000051!6.17e-11!53;CL:0000838!1.53e-10!52;CL:0000988!3.19e-10!182;CL:0000037!1.46e-09!172;CL:0000566!1.46e-09!172;CL:0002032!3.58e-09!165;CL:0000837!3.58e-09!165;CL:0000738!2.45e-08!140;CL:0002031!9.49e-08!124;CL:0000945!5.14e-07!24;CL:0000826!5.14e-07!24 | |ontology_enrichment_celltype=CL:0000542!6.17e-11!53;CL:0000051!6.17e-11!53;CL:0000838!1.53e-10!52;CL:0000988!3.19e-10!182;CL:0000037!1.46e-09!172;CL:0000566!1.46e-09!172;CL:0002032!3.58e-09!165;CL:0000837!3.58e-09!165;CL:0000738!2.45e-08!140;CL:0002031!9.49e-08!124;CL:0000945!5.14e-07!24;CL:0000826!5.14e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000515;1.78e-09;3!CL:0000319;4.06e-08;1!CL:0000785;1.00e-07;1!CL:0000819;1.00e-07;1!CL:0000056;2.58e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.55e-08,1;CL:0000819,6.97e-08,1;CL:0000515,1.54e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;2.58e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;4.06e-08;1!DOID:9119;4.06e-08;1!DOID:0060073;1.00e-07;1!DOID:8675;1.00e-07;1!DOID:6193;1.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.55e-08,1;DOID:9119,4.35e-08,1;DOID:0060073,6.97e-08,1;DOID:8675,6.97e-08,1;DOID:6193,1.87e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.11e-09!9 | |ontology_enrichment_uberon=UBERON:0001737!8.11e-09!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.99e-08;1!UBERON:0002134;1.00e-07;1!UBERON:0005208;1.00e-07;1!UBERON:0004145;1.00e-07;1!UBERON:0005946;1.00e-07;1!UBERON:0005965;1.00e-07;1!UBERON:0002078;1.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.89e-08,1;UBERON:0002134,8.51e-08,1;UBERON:0005208,8.51e-08,1;UBERON:0005946,8.51e-08,1;UBERON:0005965,8.51e-08,1;UBERON:0002078,8.51e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.305653622991805,0.164201178899891,0.629686250509434,0,0,0,0.919421224478927,0,0.369754010166788,0.0774672005803016,1.13735385989937,0.587200878669695,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0.863077176966451,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,1.45104619314292,0,0,0,0,0,0,0,0.632924774881769,0,0.212604299965044,0,0,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0.853460445133014,0.400395987036012,1.14950487990897,0,0,0.569212969109448,0,0.382273228125229,2.64342657158052,0.560508562981536,0.263384084775077,0.196709770113833,0.786021525498329,0,0.334372990781356,0.32592226663359,0.946895611469467,0,0.111410456885174,0,0.221533894583621,0,0.640456598628376,0.390178042679635,0.822189523018381,0.552700035571697,0,0,0.267540828089713,0,0,0.383220493601921,0,0,0,0.651083453856419,0,0.150575119077773,0.255973222308837,1.24930726552346,0,0,0.201606743224732,0,0,0,0,0,1.44575660953827,0,0.289693037921647,0,0,0,0.221729397462564,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,1.10825646193673,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.723033089650446,0.55146986366197,0.653638332277218,0.474541238222193,0.539325232640658,0.588664395376038,0.769494313892781,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0,0,0,0,0,0,0,0.268675568108545,0,0,2.46331618947972,0.968532774145487,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,1.73737568001095,0.410952645100767,1.79060963239896,0.224170287987055,0,0.431255149719035,0,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.551346289938122,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0.245040215981032,0.185803175125719,0,0.0711418433484141,0.318852545457645,0.997896857164083,0.383010740264733,1.90506224451495,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,2.33150377598474,4.22961015263549,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0.824019371133798,0,0,0.276283915531148,0,0,0.246169610922139,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,4.44547960578548,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.794682894901893,0.421996129056054,0,0,0,0,0.0884575645033392,0,1.18608451472249,1.23563938946503,0.730953646538188,0,0.802577647298789,0,1.45963831372533,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,11.8400520949347,0,1.0319161948297,0,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0,0.137041924646751,0.397429223405979,0,0,0.400794101257669,0,0,0,0,0,0,0.124252535565433,0,0,0,1.4279750469085,0,0,0,0,0,3.6804229599104,0,0.229160424011684,1.43574604915363,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0.992332043623902,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.568209015825267,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.322231671127465,0,0,0.800055529326307,0,0,0,0,0,0,1.81364740409818,0.694567422971502,0,0.358177682162975,0,0,0.353378291891762,0,0,1.02496607435179,0,0.303859956177382,0,0.974301544196942,2.25870228532717,0.490696182767533,0,2.94927490504463,0,0.79994958341972,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.60511520611056,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0.576169937778896,0.171488009437418,0,0,0.236387681767936,0,0,0,0,0,1.07963795609311,0.47775168788705,0,0,0.697448552208751,0,0,0.414432328326074,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.499705779624645,0,0,0.240724100067505,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0,0,0.332660356546013,0,0.320182037633146,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.305653622991805,0.164201178899891,0.629686250509434,0,0,0,0.919421224478927,0,0.369754010166788,0.0774672005803016,1.13735385989937,0.587200878669695,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0.863077176966451,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,1.45104619314292,0,0,0,0,0,0,0,0.632924774881769,0,0.212604299965044,0,0,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0.853460445133014,0.400395987036012,1.14950487990897,0,0,0.569212969109448,0,0.382273228125229,2.64342657158052,0.560508562981536,0.263384084775077,0.196709770113833,0.786021525498329,0,0.334372990781356,0.32592226663359,0.946895611469467,0,0.111410456885174,0,0.221533894583621,0,0.640456598628376,0.390178042679635,0.822189523018381,0.552700035571697,0,0,0.267540828089713,0,0,0.383220493601921,0,0,0,0.651083453856419,0,0.150575119077773,0.255973222308837,1.24930726552346,0,0,0.201606743224732,0,0,0,0,0,1.44575660953827,0,0.289693037921647,0,0,0,0.221729397462564,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,1.10825646193673,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.723033089650446,0.55146986366197,0.653638332277218,0.474541238222193,0.539325232640658,0.588664395376038,0.769494313892781,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0,0,0,0,0,0,0,0.268675568108545,0,0,2.46331618947972,0.968532774145487,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,1.73737568001095,0.410952645100767,1.79060963239896,0.224170287987055,0,0.431255149719035,0,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.551346289938122,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0.245040215981032,0.185803175125719,0,0.0711418433484141,0.318852545457645,0.997896857164083,0.383010740264733,1.90506224451495,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,2.33150377598474,4.22961015263549,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0.824019371133798,0,0,0.276283915531148,0,0,0.246169610922139,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,4.44547960578548,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.794682894901893,0.421996129056054,0,0,0,0,0.0884575645033392,0,1.18608451472249,1.23563938946503,0.730953646538188,0,0.802577647298789,0,1.45963831372533,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,11.8400520949347,0,1.0319161948297,0,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0,0.137041924646751,0.397429223405979,0,0,0.400794101257669,0,0,0,0,0,0,0.124252535565433,0,0,0,1.4279750469085,0,0,0,0,0,3.6804229599104,0,0.229160424011684,1.43574604915363,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0.992332043623902,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.568209015825267,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.322231671127465,0,0,0.800055529326307,0,0,0,0,0,0,1.81364740409818,0.694567422971502,0,0.358177682162975,0,0,0.353378291891762,0,0,1.02496607435179,0,0.303859956177382,0,0.974301544196942,2.25870228532717,0.490696182767533,0,2.94927490504463,0,0.79994958341972,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.60511520611056,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0.576169937778896,0.171488009437418,0,0,0.236387681767936,0,0,0,0,0,1.07963795609311,0.47775168788705,0,0,0.697448552208751,0,0,0.414432328326074,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.499705779624645,0,0,0.240724100067505,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0,0,0.332660356546013,0,0.320182037633146,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr11:102193487..102193509,- | |short_description=p@chr11:102193487..102193509,- | ||
}} | }} |
Latest revision as of 17:26, 23 July 2015
Short description: | p@chr11:102193487..102193509, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102193487..102193509, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.55e-08 | 1 |
B-1 B cell | 6.97e-08 | 1 |
skeletal muscle myoblast | 1.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.89e-08 | 1 |
tricuspid valve | 8.51e-08 | 1 |
right atrium valve | 8.51e-08 | 1 |
outflow tract of atrium | 8.51e-08 | 1 |
outflow part of right atrium | 8.51e-08 | 1 |
right cardiac atrium | 8.51e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.55e-08 | 1 |
acute myeloid leukemia | 4.35e-08 | 1 |
lymphatic system cancer | 6.97e-08 | 1 |
lymphosarcoma | 6.97e-08 | 1 |
epithelioid sarcoma | 1.87e-07 | 1 |