FFCP PHASE1:Hg19::chr11:101000537..101000553,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5241 | |EntrezGene=5241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8910 | |HGNC=8910 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXE8,P06401,Q8TDS3 | |UniProt=F5GXE8,P06401,Q8TDS3 | ||
|association_with_transcript=0bp_to_ENST00000537623,NM_000926,uc001pgh.2,uc001pgi.2,uc001pgj.2,uc009yww.1,uc009ywx.1_5end | |association_with_transcript=0bp_to_ENST00000537623,NM_000926,uc001pgh.2,uc001pgi.2,uc001pgj.2,uc009yww.1,uc009ywx.1_5end | ||
|cluster_id=chr11:101000537..101000553,- | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_1_at_PGR_5end | |description=CAGE_peak_1_at_PGR_5end | ||
|id=chr11:101000537..101000553,- | |id=chr11:101000537..101000553,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.43e-09;2!UBERON:0005062;5.74e-09;4!UBERON:0007284;5.74e-09;4!UBERON:0004872;8.70e-09;7!UBERON:0006965;9.18e-09;2!UBERON:0006603;5.00e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;8.41e-10;4!DOID:1612;8.41e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.94e-10,4;DOID:1612,8.94e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.17e-72!115;UBERON:0001049!7.80e-27!57;UBERON:0005068!7.80e-27!57;UBERON:0006241!7.80e-27!57;UBERON:0007135!7.80e-27!57;UBERON:0003075!7.57e-23!86;UBERON:0007284!7.57e-23!86;UBERON:0002346!2.88e-21!90;UBERON:0002616!9.27e-21!59;UBERON:0005743!1.22e-20!86;UBERON:0001017!1.11e-19!82;UBERON:0003080!2.37e-19!42;UBERON:0000073!8.38e-19!94;UBERON:0001016!8.38e-19!94;UBERON:0000955!2.23e-18!69;UBERON:0006238!2.23e-18!69;UBERON:0002780!4.47e-18!41;UBERON:0001890!4.47e-18!41;UBERON:0006240!4.47e-18!41;UBERON:0002020!3.90e-16!34;UBERON:0003528!3.90e-16!34;UBERON:0001893!1.03e-15!34;UBERON:0002791!8.00e-15!33;UBERON:0001869!5.01e-14!32;UBERON:0003056!3.11e-13!61;UBERON:0002308!2.22e-12!9;UBERON:0000125!2.22e-12!9;UBERON:0004111!7.95e-11!241;UBERON:0004121!1.35e-10!169;UBERON:0000033!2.16e-10!123;UBERON:0000153!4.42e-10!129;UBERON:0007811!4.42e-10!129;UBERON:0000924!4.64e-10!173;UBERON:0006601!4.64e-10!173;UBERON:0000025!6.15e-10!194;UBERON:0009663!9.25e-10!7;UBERON:0002420!2.30e-09!9;UBERON:0007245!2.30e-09!9;UBERON:0010009!2.30e-09!9;UBERON:0010011!2.30e-09!9;UBERON:0000454!2.30e-09!9;UBERON:0002619!4.07e-09!22;UBERON:0002298!6.49e-09!8;UBERON:0001950!1.10e-08!20;UBERON:0003076!1.18e-08!15;UBERON:0003057!1.18e-08!15;UBERON:0000477!4.54e-08!286;UBERON:0000956!1.07e-07!25;UBERON:0000203!1.07e-07!25;UBERON:0000062!4.83e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!4.17e-72!115;UBERON:0001049!7.80e-27!57;UBERON:0005068!7.80e-27!57;UBERON:0006241!7.80e-27!57;UBERON:0007135!7.80e-27!57;UBERON:0003075!7.57e-23!86;UBERON:0007284!7.57e-23!86;UBERON:0002346!2.88e-21!90;UBERON:0002616!9.27e-21!59;UBERON:0005743!1.22e-20!86;UBERON:0001017!1.11e-19!82;UBERON:0003080!2.37e-19!42;UBERON:0000073!8.38e-19!94;UBERON:0001016!8.38e-19!94;UBERON:0000955!2.23e-18!69;UBERON:0006238!2.23e-18!69;UBERON:0002780!4.47e-18!41;UBERON:0001890!4.47e-18!41;UBERON:0006240!4.47e-18!41;UBERON:0002020!3.90e-16!34;UBERON:0003528!3.90e-16!34;UBERON:0001893!1.03e-15!34;UBERON:0002791!8.00e-15!33;UBERON:0001869!5.01e-14!32;UBERON:0003056!3.11e-13!61;UBERON:0002308!2.22e-12!9;UBERON:0000125!2.22e-12!9;UBERON:0004111!7.95e-11!241;UBERON:0004121!1.35e-10!169;UBERON:0000033!2.16e-10!123;UBERON:0000153!4.42e-10!129;UBERON:0007811!4.42e-10!129;UBERON:0000924!4.64e-10!173;UBERON:0006601!4.64e-10!173;UBERON:0000025!6.15e-10!194;UBERON:0009663!9.25e-10!7;UBERON:0002420!2.30e-09!9;UBERON:0007245!2.30e-09!9;UBERON:0010009!2.30e-09!9;UBERON:0010011!2.30e-09!9;UBERON:0000454!2.30e-09!9;UBERON:0002619!4.07e-09!22;UBERON:0002298!6.49e-09!8;UBERON:0001950!1.10e-08!20;UBERON:0003076!1.18e-08!15;UBERON:0003057!1.18e-08!15;UBERON:0000477!4.54e-08!286;UBERON:0000956!1.07e-07!25;UBERON:0000203!1.07e-07!25;UBERON:0000062!4.83e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;8.37e-12;3!UBERON:0000946;8.37e-12;3!UBERON:0005904;1.46e-09;4!UBERON:0000007;6.09e-09;2!UBERON:0003135;1.55e-08;11!UBERON:0002133;1.61e-08;2!UBERON:0000473;1.08e-07;8!UBERON:0007023;2.72e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.45e-20,114;UBERON:0003978,5.13e-12,3;UBERON:0009751,5.13e-12,3;UBERON:0000946,5.13e-12,3;UBERON:0002523,5.13e-12,3;UBERON:0005983,5.13e-12,3;UBERON:0002165,5.13e-12,3;UBERON:0002062,5.13e-12,3;UBERON:0007280,5.13e-12,3;UBERON:0005904,1.27e-09,4;UBERON:0000007,7.28e-09,2;UBERON:0002133,9.57e-09,2;UBERON:0003135,1.27e-08,11;UBERON:0000473,8.51e-08,8 | |||
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|short_description=p1@PGR | |short_description=p1@PGR | ||
}} | }} |
Latest revision as of 07:54, 20 September 2015
Short description: | p1@PGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PGR_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 0bp_to_ENST00000537623, NM_000926, uc001pgh.2, uc001pgi.2, uc001pgj.2, uc009yww.1, uc009ywx.1_5end |
EntrezGene: | PGR |
HGNC: | 8910 |
UniProt: | F5GXE8P06401Q8TDS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.45e-20 | 114 |
valve | 5.13e-12 | 3 |
cardiac mesenchyme | 5.13e-12 | 3 |
cardial valve | 5.13e-12 | 3 |
tunica intima | 5.13e-12 | 3 |
heart layer | 5.13e-12 | 3 |
endocardium | 5.13e-12 | 3 |
endocardial cushion | 5.13e-12 | 3 |
presumptive endocardium | 5.13e-12 | 3 |
duct of male reproductive system | 1.27e-09 | 4 |
pituitary gland | 7.28e-09 | 2 |
atrioventricular valve | 9.57e-09 | 2 |
male reproductive organ | 1.27e-08 | 11 |
testis | 8.51e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.94e-10 | 4 |
breast cancer | 8.94e-10 | 4 |