FFCP PHASE1:Hg19::chr10:73822482..73822493,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:73822482..73822493,- | |||
|coexpression_cluster_id=C676 | |||
|description=CAGE_peak_at_chr10:73822482..73822493,- | |description=CAGE_peak_at_chr10:73822482..73822493,- | ||
|id=chr10:73822482..73822493,- | |id=chr10:73822482..73822493,- | ||
|ontology_enrichment_celltype=CL:0000791!6.90e-15!18;CL:0000789!6.90e-15!18;CL:0002420!6.90e-15!18;CL:0002419!6.90e-15!18;CL:0000790!6.90e-15!18;CL:0000084!4.24e-11!25;CL:0000827!4.24e-11!25;CL:0000624!4.51e-09!6;CL:0000838!2.16e-08!52;CL:0000542!4.11e-08!53;CL:0000051!4.11e-08!53;CL:0000625!2.98e-07!11 | |ontology_enrichment_celltype=CL:0000791!6.90e-15!18;CL:0000789!6.90e-15!18;CL:0002420!6.90e-15!18;CL:0002419!6.90e-15!18;CL:0000790!6.90e-15!18;CL:0000084!4.24e-11!25;CL:0000827!4.24e-11!25;CL:0000624!4.51e-09!6;CL:0000838!2.16e-08!52;CL:0000542!4.11e-08!53;CL:0000051!4.11e-08!53;CL:0000625!2.98e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.71e-12;3!CL:0000624;1.38e-10;6!CL:0000791;6.03e-10;18!CL:0000789;6.03e-10;18!CL:0002419;6.03e-10;18!CL:0000084;5.49e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.29e-12,3;CL:0000825,2.29e-12,3;CL:0000624,1.28e-10,6;CL:0000791,5.48e-10,18;CL:0000789,5.48e-10,18;CL:0002420,5.48e-10,18;CL:0002419,5.48e-10,18;CL:0000790,5.48e-10,18;CL:0000084,5.21e-09,25;CL:0000827,5.21e-09,25;CL:0000838,2.46e-08,52;CL:0000542,3.93e-08,53;CL:0000051,3.93e-08,53 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.17e-12;3!CL:0000790;6.03e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.15e-33!115;UBERON:0001049!3.11e-27!57;UBERON:0005068!3.11e-27!57;UBERON:0006241!3.11e-27!57;UBERON:0007135!3.11e-27!57;UBERON:0001893!3.76e-23!34;UBERON:0002616!3.89e-23!59;UBERON:0002020!1.08e-22!34;UBERON:0003528!1.08e-22!34;UBERON:0002780!2.37e-22!41;UBERON:0001890!2.37e-22!41;UBERON:0006240!2.37e-22!41;UBERON:0002791!5.16e-22!33;UBERON:0003080!1.36e-21!42;UBERON:0001869!2.11e-21!32;UBERON:0000955!2.61e-20!69;UBERON:0006238!2.61e-20!69;UBERON:0001017!4.17e-18!82;UBERON:0005743!1.31e-17!86;UBERON:0002619!2.74e-17!22;UBERON:0000956!3.29e-16!25;UBERON:0000203!3.29e-16!25;UBERON:0003075!1.16e-15!86;UBERON:0007284!1.16e-15!86;UBERON:0000073!1.58e-15!94;UBERON:0001016!1.58e-15!94;UBERON:0001950!2.65e-15!20;UBERON:0002346!2.07e-14!90;UBERON:0003056!6.29e-13!61;UBERON:0000153!2.10e-10!129;UBERON:0007811!2.10e-10!129;UBERON:0000178!1.87e-09!15;UBERON:0000179!1.87e-09!15;UBERON:0000463!1.87e-09!15;UBERON:0000033!7.80e-09!123;UBERON:0002420!1.76e-08!9;UBERON:0007245!1.76e-08!9;UBERON:0010009!1.76e-08!9;UBERON:0010011!1.76e-08!9;UBERON:0000454!1.76e-08!9;UBERON:0000200!2.64e-08!6;UBERON:0002308!5.40e-08!9;UBERON:0000125!5.40e-08!9;UBERON:0002021!3.85e-07!5;UBERON:0003076!7.05e-07!15;UBERON:0003057!7.05e-07!15;UBERON:0000349!7.59e-07!5 | |ontology_enrichment_uberon=UBERON:0007023!3.15e-33!115;UBERON:0001049!3.11e-27!57;UBERON:0005068!3.11e-27!57;UBERON:0006241!3.11e-27!57;UBERON:0007135!3.11e-27!57;UBERON:0001893!3.76e-23!34;UBERON:0002616!3.89e-23!59;UBERON:0002020!1.08e-22!34;UBERON:0003528!1.08e-22!34;UBERON:0002780!2.37e-22!41;UBERON:0001890!2.37e-22!41;UBERON:0006240!2.37e-22!41;UBERON:0002791!5.16e-22!33;UBERON:0003080!1.36e-21!42;UBERON:0001869!2.11e-21!32;UBERON:0000955!2.61e-20!69;UBERON:0006238!2.61e-20!69;UBERON:0001017!4.17e-18!82;UBERON:0005743!1.31e-17!86;UBERON:0002619!2.74e-17!22;UBERON:0000956!3.29e-16!25;UBERON:0000203!3.29e-16!25;UBERON:0003075!1.16e-15!86;UBERON:0007284!1.16e-15!86;UBERON:0000073!1.58e-15!94;UBERON:0001016!1.58e-15!94;UBERON:0001950!2.65e-15!20;UBERON:0002346!2.07e-14!90;UBERON:0003056!6.29e-13!61;UBERON:0000153!2.10e-10!129;UBERON:0007811!2.10e-10!129;UBERON:0000178!1.87e-09!15;UBERON:0000179!1.87e-09!15;UBERON:0000463!1.87e-09!15;UBERON:0000033!7.80e-09!123;UBERON:0002420!1.76e-08!9;UBERON:0007245!1.76e-08!9;UBERON:0010009!1.76e-08!9;UBERON:0010011!1.76e-08!9;UBERON:0000454!1.76e-08!9;UBERON:0000200!2.64e-08!6;UBERON:0002308!5.40e-08!9;UBERON:0000125!5.40e-08!9;UBERON:0002021!3.85e-07!5;UBERON:0003076!7.05e-07!15;UBERON:0003057!7.05e-07!15;UBERON:0000349!7.59e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.88e-11;34!UBERON:0001869;1.25e-10;32!UBERON:0001950;1.89e-10;20!UBERON:0002791;7.79e-10;32!UBERON:0002619;1.99e-09;22!UBERON:0003528;1.81e-08;34!UBERON:0002020;1.81e-08;34!UBERON:0000956;3.44e-08;25!UBERON:0000203;3.44e-08;25!UBERON:0002021;1.93e-07;5!UBERON:0002680;5.91e-07;9!UBERON:0001895;5.91e-07;9!UBERON:0000073;6.90e-07;53!UBERON:0002616;6.90e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.38e-12,53;UBERON:0002616,3.38e-12,53;UBERON:0001869,1.44e-11,32;UBERON:0001049,2.22e-11,56;UBERON:0005068,2.22e-11,56;UBERON:0006241,2.22e-11,56;UBERON:0007135,2.22e-11,56;UBERON:0001893,8.82e-11,34;UBERON:0001950,2.29e-10,20;UBERON:0000955,4.45e-10,68;UBERON:0006238,4.45e-10,68;UBERON:0002791,1.50e-09,32;UBERON:0007023,1.57e-09,114;UBERON:0002619,2.37e-09,22;UBERON:0003528,6.77e-09,34;UBERON:0002020,6.77e-09,34;UBERON:0002780,1.27e-08,41;UBERON:0001890,1.27e-08,41;UBERON:0003080,1.27e-08,41;UBERON:0006240,1.27e-08,41;UBERON:0000956,3.99e-08,25;UBERON:0000203,3.99e-08,25;UBERON:0001017,5.92e-08,81;UBERON:0002021,2.82e-07,5;UBERON:0002680,7.17e-07,9;UBERON:0001895,7.17e-07,9;UBERON:0010092,7.17e-07,9;UBERON:0001016,7.57e-07,89;UBERON:0003075,8.20e-07,82;UBERON:0007284,8.20e-07,82 | |||
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|short_description=p@chr10:73822482..73822493,- | |short_description=p@chr10:73822482..73822493,- | ||
}} | }} |
Latest revision as of 15:23, 23 July 2015
Short description: | p@chr10:73822482..73822493, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73822482..73822493, - |
Coexpression cluster: | C676_serous_CD8_CD4_Natural_gall_cerebellum_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.29e-12 | 3 |
pro-NK cell | 2.29e-12 | 3 |
CD4-positive, alpha-beta T cell | 1.28e-10 | 6 |
mature alpha-beta T cell | 5.48e-10 | 18 |
alpha-beta T cell | 5.48e-10 | 18 |
immature T cell | 5.48e-10 | 18 |
mature T cell | 5.48e-10 | 18 |
immature alpha-beta T cell | 5.48e-10 | 18 |
T cell | 5.21e-09 | 25 |
pro-T cell | 5.21e-09 | 25 |
lymphoid lineage restricted progenitor cell | 2.46e-08 | 52 |
lymphocyte | 3.93e-08 | 53 |
common lymphoid progenitor | 3.93e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.38e-12 | 53 |
regional part of brain | 3.38e-12 | 53 |
cerebral hemisphere | 1.44e-11 | 32 |
neural tube | 2.22e-11 | 56 |
neural rod | 2.22e-11 | 56 |
future spinal cord | 2.22e-11 | 56 |
neural keel | 2.22e-11 | 56 |
telencephalon | 8.82e-11 | 34 |
neocortex | 2.29e-10 | 20 |
brain | 4.45e-10 | 68 |
future brain | 4.45e-10 | 68 |
regional part of telencephalon | 1.50e-09 | 32 |
adult organism | 1.57e-09 | 114 |
regional part of cerebral cortex | 2.37e-09 | 22 |
brain grey matter | 6.77e-09 | 34 |
gray matter | 6.77e-09 | 34 |
regional part of forebrain | 1.27e-08 | 41 |
forebrain | 1.27e-08 | 41 |
anterior neural tube | 1.27e-08 | 41 |
future forebrain | 1.27e-08 | 41 |
cerebral cortex | 3.99e-08 | 25 |
pallium | 3.99e-08 | 25 |
central nervous system | 5.92e-08 | 81 |
occipital lobe | 2.82e-07 | 5 |
regional part of metencephalon | 7.17e-07 | 9 |
metencephalon | 7.17e-07 | 9 |
future metencephalon | 7.17e-07 | 9 |
nervous system | 7.57e-07 | 89 |
neural plate | 8.20e-07 | 82 |
presumptive neural plate | 8.20e-07 | 82 |