FFCP PHASE1:Hg19::chr3:25470156..25470227,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5915 | |EntrezGene=5915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9865 | |HGNC=9865 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462272,ENST00000479097,ENST00000480001,ENST00000489694_5end | |association_with_transcript=0bp_to_ENST00000462272,ENST00000479097,ENST00000480001,ENST00000489694_5end | ||
|cluster_id=chr3:25470156..25470227,+ | |||
|description=CAGE_peak_2_at_RARB_5end | |description=CAGE_peak_2_at_RARB_5end | ||
|id=chr3:25470156..25470227,+ | |id=chr3:25470156..25470227,+ | ||
|ontology_enrichment_celltype=CL:0000187!2.18e-15!54;CL:0000183!2.19e-15!59;CL:0000680!5.65e-14!57;CL:0000056!5.65e-14!57;CL:0000355!5.65e-14!57;CL:0000055!1.26e-13!180;CL:0000393!2.93e-12!60;CL:0000211!2.93e-12!60;CL:0000222!5.46e-12!119;CL:0000192!3.42e-11!42;CL:0000514!3.42e-11!42;CL:0000359!1.88e-10!32 | |ontology_enrichment_celltype=CL:0000187!2.18e-15!54;CL:0000183!2.19e-15!59;CL:0000680!5.65e-14!57;CL:0000056!5.65e-14!57;CL:0000355!5.65e-14!57;CL:0000055!1.26e-13!180;CL:0000393!2.93e-12!60;CL:0000211!2.93e-12!60;CL:0000222!5.46e-12!119;CL:0000192!3.42e-11!42;CL:0000514!3.42e-11!42;CL:0000359!1.88e-10!32 | ||
|ontology_enrichment_celltype_v019=CL:0000187;2.04e-08;55!CL:0000359;4.44e-08;32!CL:0000393;1.65e-07;61!CL:0000211;1.65e-07;61!CL:0000192;2.61e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,7.06e-15,55;CL:0000680,2.54e-13,58;CL:0000056,2.54e-13,58;CL:0000355,2.54e-13,58;CL:0000393,6.06e-12,61;CL:0000211,6.06e-12,61;CL:0000222,1.15e-10,121;CL:0000192,5.90e-10,43;CL:0000514,5.90e-10,43;CL:0000359,1.51e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000355;1.96e-07;58!CL:0000514;2.61e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;8.75e-09;33!UBERON:0004571;8.75e-09;33!UBERON:0001637;1.28e-08;42!UBERON:0003509;1.28e-08;42!UBERON:0004572;1.28e-08;42!UBERON:0007100;2.12e-08;25!UBERON:0007625;2.54e-08;11!UBERON:0000948;1.07e-07;22 | |||
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| ||
|short_description=p2@RARB | |short_description=p2@RARB | ||
}} | }} |
Latest revision as of 20:32, 17 September 2015
Short description: | p2@RARB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RARB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000462272, ENST00000479097, ENST00000480001, ENST00000489694_5end |
EntrezGene: | RARB |
HGNC: | 9865 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 7.06e-15 | 55 |
muscle precursor cell | 2.54e-13 | 58 |
myoblast | 2.54e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.54e-13 | 58 |
electrically responsive cell | 6.06e-12 | 61 |
electrically active cell | 6.06e-12 | 61 |
mesodermal cell | 1.15e-10 | 121 |
smooth muscle cell | 5.90e-10 | 43 |
smooth muscle myoblast | 5.90e-10 | 43 |
vascular associated smooth muscle cell | 1.51e-08 | 32 |