FFCP PHASE1:Hg19::chr3:190030787..190030799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9076 | |EntrezGene=9076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2032 | |HGNC=2032 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=207bp_to_ENST00000490800_5end | |association_with_transcript=207bp_to_ENST00000490800_5end | ||
|cluster_id=chr3:190030787..190030799,- | |||
|description=CAGE_peak_2_at_CLDN1_5end | |description=CAGE_peak_2_at_CLDN1_5end | ||
|id=chr3:190030787..190030799,- | |id=chr3:190030787..190030799,- | ||
|ontology_enrichment_celltype=CL:0000066!2.29e-34!254;CL:0000223!4.44e-20!59;CL:0002076!1.04e-16!43;CL:0002251!2.10e-07!21;CL:0002321!5.04e-07!248;CL:0000220!7.17e-07!246 | |ontology_enrichment_celltype=CL:0000066!2.29e-34!254;CL:0000223!4.44e-20!59;CL:0002076!1.04e-16!43;CL:0002251!2.10e-07!21;CL:0002321!5.04e-07!248;CL:0000220!7.17e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.82e-14;42!CL:0002368;1.91e-09;13!CL:0002149;4.36e-08;6!CL:0002255;4.36e-08;6!CL:0002166;1.19e-07;3!CL:0000064;2.12e-07;3!CL:0000067;2.12e-07;3!CL:0005012;2.12e-07;3!CL:0002328;2.12e-07;3!CL:0002304;2.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,5.58e-21,58;CL:0002076,2.54e-20,42;CL:0000066,8.74e-16,253;CL:0002368,2.07e-09,13;CL:0002321,2.11e-08,250;CL:0002149,2.43e-08,6;CL:0002255,2.43e-08,6;CL:0002166,1.30e-07,3;CL:0002328,1.59e-07,3;CL:0000064,1.81e-07,3;CL:0000067,1.81e-07,3;CL:0005012,1.81e-07,3;CL:0002304,1.81e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;3.97e-11;58 | |||
|ontology_enrichment_disease=DOID:305!6.21e-18!106;DOID:0050687!9.40e-15!143;DOID:193!1.18e-12!29;DOID:120!1.57e-12!27;DOID:14566!7.77e-11!239;DOID:162!1.80e-10!235;DOID:1749!4.49e-09!14;DOID:2394!4.81e-09!14;DOID:299!1.09e-07!25 | |ontology_enrichment_disease=DOID:305!6.21e-18!106;DOID:0050687!9.40e-15!143;DOID:193!1.18e-12!29;DOID:120!1.57e-12!27;DOID:14566!7.77e-11!239;DOID:162!1.80e-10!235;DOID:1749!4.49e-09!14;DOID:2394!4.81e-09!14;DOID:299!1.09e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:120;3.70e-08;27!DOID:3001;4.36e-08;6!DOID:193;1.57e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.43e-08,6;DOID:120,2.92e-08,27;DOID:193,1.26e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.73e-14!169;UBERON:0000925!1.73e-14!169;UBERON:0006595!1.73e-14!169;UBERON:0001007!9.63e-11!155;UBERON:0001555!9.63e-11!155;UBERON:0007026!9.63e-11!155;UBERON:0000466!2.14e-10!126;UBERON:0005911!4.45e-10!82;UBERON:0001048!3.25e-09!168;UBERON:0003134!7.20e-09!37;UBERON:0000474!7.20e-09!37;UBERON:0004921!9.93e-09!129;UBERON:0004185!9.93e-09!129;UBERON:0000077!1.13e-08!130;UBERON:0003100!3.37e-08!41;UBERON:0002553!4.37e-08!70;UBERON:0005156!7.35e-08!59;UBERON:0000990!7.35e-08!59;UBERON:0000464!7.43e-08!104;UBERON:0003929!1.70e-07!54;UBERON:0000992!2.04e-07!13;UBERON:0003886!2.22e-07!63;UBERON:0001041!3.87e-07!98;UBERON:0003133!8.50e-07!48;UBERON:0001004!9.64e-07!72 | |ontology_enrichment_uberon=UBERON:0004119!1.73e-14!169;UBERON:0000925!1.73e-14!169;UBERON:0006595!1.73e-14!169;UBERON:0001007!9.63e-11!155;UBERON:0001555!9.63e-11!155;UBERON:0007026!9.63e-11!155;UBERON:0000466!2.14e-10!126;UBERON:0005911!4.45e-10!82;UBERON:0001048!3.25e-09!168;UBERON:0003134!7.20e-09!37;UBERON:0000474!7.20e-09!37;UBERON:0004921!9.93e-09!129;UBERON:0004185!9.93e-09!129;UBERON:0000077!1.13e-08!130;UBERON:0003100!3.37e-08!41;UBERON:0002553!4.37e-08!70;UBERON:0005156!7.35e-08!59;UBERON:0000990!7.35e-08!59;UBERON:0000464!7.43e-08!104;UBERON:0003929!1.70e-07!54;UBERON:0000992!2.04e-07!13;UBERON:0003886!2.22e-07!63;UBERON:0001041!3.87e-07!98;UBERON:0003133!8.50e-07!48;UBERON:0001004!9.64e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.12e-07;3!UBERON:0001778;2.12e-07;3!UBERON:0002031;2.12e-07;3!UBERON:0001775;2.12e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.59e-07,3;UBERON:0002031,1.59e-07,3;UBERON:0001778,1.81e-07,3;UBERON:0001775,1.81e-07,3 | |||
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| ||
|short_description=p2@CLDN1 | |short_description=p2@CLDN1 | ||
}} | }} |
Latest revision as of 09:47, 17 September 2015
Short description: | p2@CLDN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLDN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 207bp_to_ENST00000490800_5end |
EntrezGene: | CLDN1 |
HGNC: | 2032 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 5.58e-21 | 58 |
endo-epithelial cell | 2.54e-20 | 42 |
epithelial cell | 8.74e-16 | 253 |
respiratory epithelial cell | 2.07e-09 | 13 |
embryonic cell | 2.11e-08 | 250 |
epithelial cell of uterus | 2.43e-08 | 6 |
stromal cell of endometrium | 2.43e-08 | 6 |
epithelial cell of Malassez | 1.30e-07 | 3 |
bronchial epithelial cell | 1.59e-07 | 3 |
ciliated cell | 1.81e-07 | 3 |
ciliated epithelial cell | 1.81e-07 | 3 |
multi-ciliated epithelial cell | 1.81e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.59e-07 | 3 |
epithelium of bronchus | 1.59e-07 | 3 |
ciliary epithelium | 1.81e-07 | 3 |
ciliary body | 1.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.43e-08 | 6 |
female reproductive organ cancer | 2.92e-08 | 27 |
reproductive organ cancer | 1.26e-07 | 29 |