FFCP PHASE1:Hg19::chr3:128205701..128205712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2624 | |EntrezGene=2624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4171 | |HGNC=4171 | ||
|TSSclassifier=strong | |||
|UniProt=P23769 | |UniProt=P23769 | ||
|association_with_transcript=161bp_to_BT006671_5end | |association_with_transcript=161bp_to_BT006671_5end | ||
|cluster_id=chr3:128205701..128205712,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_10_at_GATA2_5end | |description=CAGE_peak_10_at_GATA2_5end | ||
|id=chr3:128205701..128205712,- | |id=chr3:128205701..128205712,- | ||
|ontology_enrichment_celltype=CL:0002274!8.68e-16!5;CL:0000457!8.68e-16!5;CL:0002191!8.68e-16!5;CL:0000097!8.68e-16!5;CL:0000831!8.68e-16!5;CL:0002028!8.68e-16!5;CL:0002622!3.58e-09!3;CL:0000163!1.52e-08!9;CL:0002150!4.81e-08!3;CL:0000861!4.81e-08!3 | |ontology_enrichment_celltype=CL:0002274!8.68e-16!5;CL:0000457!8.68e-16!5;CL:0002191!8.68e-16!5;CL:0000097!8.68e-16!5;CL:0000831!8.68e-16!5;CL:0002028!8.68e-16!5;CL:0002622!3.58e-09!3;CL:0000163!1.52e-08!9;CL:0002150!4.81e-08!3;CL:0000861!4.81e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.67e-64;5!CL:0000163;6.11e-36;9!CL:0002593;3.70e-11;2!CL:0000151;2.53e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.67e-64,5;CL:0002028,3.67e-64,5;CL:0000163,6.12e-36,9;CL:0002593,4.09e-11,2;CL:0000151,2.63e-09,36 | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.45e-21;1!UBERON:0007297;2.73e-11;2 | |||
|ontology_enrichment_disease=DOID:8692!7.79e-09!31 | |ontology_enrichment_disease=DOID:8692!7.79e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:1799;6.31e-21;1!DOID:10165;6.31e-21;1!DOID:1798;6.31e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.22e-21,1;DOID:10165,4.22e-21,1;DOID:1798,4.22e-21,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.11e-27;3!UBERON:0004054;3.11e-27;3!UBERON:0000998;3.45e-21;1!UBERON:0006868;3.45e-21;1!UBERON:0001000;6.31e-21;1!UBERON:0005352;6.31e-21;1!UBERON:0005904;1.04e-20;4!UBERON:0002456;3.70e-11;2!UBERON:0000058;7.07e-09;10!UBERON:0003135;3.76e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.11e-27,3;UBERON:0004054,3.11e-27,3;UBERON:0000998,3.45e-21,1;UBERON:0006868,3.45e-21,1;UBERON:0001000,6.31e-21,1;UBERON:0005352,6.31e-21,1;UBERON:0005904,1.05e-20,4;UBERON:0002456,4.09e-11,2;UBERON:0003135,3.76e-08,11 | |||
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| ||
|short_description=p10@GATA2 | |short_description=p10@GATA2 | ||
}} | }} |
Latest revision as of 06:56, 20 September 2015
Short description: | p10@GATA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GATA2_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 161bp_to_BT006671_5end |
EntrezGene: | GATA2 |
HGNC: | 4171 |
UniProt: | P23769 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.67e-64 | 5 |
basophil mast progenitor cell | 3.67e-64 | 5 |
endocrine cell | 6.12e-36 | 9 |
smooth muscle cell of the internal thoracic artery | 4.09e-11 | 2 |
secretory cell | 2.63e-09 | 36 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.11e-27 | 3 |
internal male genitalia | 3.11e-27 | 3 |
seminal vesicle | 3.45e-21 | 1 |
seminal fluid secreting gland | 3.45e-21 | 1 |
vas deferens | 6.31e-21 | 1 |
spermatic cord | 6.31e-21 | 1 |
duct of male reproductive system | 1.05e-20 | 4 |
internal thoracic artery | 4.09e-11 | 2 |
male reproductive organ | 3.76e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.22e-21 | 1 |
endocrine pancreas cancer | 4.22e-21 | 1 |
pancreatic endocrine carcinoma | 4.22e-21 | 1 |