FFCP PHASE1:Hg19::chr17:40557206..40557266,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:40557206..40557266,-
|short_description=p6@PTRF
|description=CAGE_peak_6_at_PTRF_5end
|association_with_transcript=43bp_to_BC004295_5end
|EntrezGene=2841...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284119 | |EntrezGene=284119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9688 | |HGNC=9688 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NZI2 | |UniProt=Q6NZI2 | ||
|association_with_transcript=43bp_to_BC004295_5end | |||
|cluster_id=chr17:40557206..40557266,- | |||
|coexpression_cluster_id=C1434 | |||
|description=CAGE_peak_6_at_PTRF_5end | |||
|id=chr17:40557206..40557266,- | |||
|ontology_enrichment_celltype=CL:0000055!9.85e-27!180;CL:0000222!8.82e-25!119;CL:0000057!8.61e-18!75;CL:0000220!7.11e-17!246;CL:0002321!1.19e-16!248;CL:0000680!3.92e-14!57;CL:0000056!3.92e-14!57;CL:0000355!3.92e-14!57;CL:0000183!4.63e-14!59;CL:0000187!1.61e-13!54;CL:0000213!1.28e-11!57;CL:0000215!1.28e-11!57;CL:0000393!4.07e-11!60;CL:0000211!4.07e-11!60;CL:0000192!5.13e-11!42;CL:0000514!5.13e-11!42;CL:0000144!9.17e-09!625;CL:0002078!9.93e-09!44;CL:0000359!1.09e-08!32;CL:0002371!2.44e-08!591;CL:0000115!4.49e-08!35;CL:0002139!7.32e-08!24;CL:0000071!2.51e-07!18;CL:0002546!2.51e-07!18;CL:0002620!5.82e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.12e-09;36!CL:0000192;3.48e-08;43!CL:0000359;3.61e-08;32!CL:0002139;4.91e-08;24!CL:0000187;8.98e-08;55!CL:0000057;1.43e-07;73!CL:0000134;1.67e-07;55!CL:0000071;2.71e-07;18!CL:0000213;3.37e-07;58!CL:0000215;3.37e-07;58!CL:0002620;6.72e-07;23!CL:0002320;6.94e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.90e-24,121;CL:0000057,9.14e-19,76;CL:0000213,1.10e-12,58;CL:0000215,1.10e-12,58;CL:0000680,1.20e-12,58;CL:0000056,1.20e-12,58;CL:0000355,1.20e-12,58;CL:0002321,1.71e-12,250;CL:0000187,2.54e-12,55;CL:0000192,9.24e-11,43;CL:0000514,9.24e-11,43;CL:0000393,2.60e-10,61;CL:0000211,2.60e-10,61;CL:0000115,6.92e-10,36;CL:0002078,9.18e-09,45;CL:0000359,1.91e-08,32;CL:0002139,2.65e-08,24;CL:0000071,1.44e-07,18;CL:0002546,1.44e-07,18;CL:0002620,3.04e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;3.48e-08;43!CL:0002546;2.71e-07;18!CL:0000355;4.92e-07;58!CL:0000222;7.97e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.48e-20!84;UBERON:0002049!3.49e-20!79;UBERON:0007798!3.49e-20!79;UBERON:0000914!1.49e-18!83;UBERON:0002329!1.49e-18!83;UBERON:0003077!1.49e-18!83;UBERON:0003059!1.49e-18!83;UBERON:0007282!1.49e-18!83;UBERON:0009618!1.49e-18!83;UBERON:0007285!1.49e-18!83;UBERON:0000055!2.17e-18!69;UBERON:0001981!5.21e-18!60;UBERON:0007500!5.21e-18!60;UBERON:0004537!5.21e-18!60;UBERON:0006965!5.21e-18!60;UBERON:0005256!7.31e-18!143;UBERON:0004290!3.78e-17!70;UBERON:0000486!9.07e-17!82;UBERON:0003914!2.48e-16!118;UBERON:0000490!3.37e-16!138;UBERON:0001637!6.97e-15!42;UBERON:0003509!6.97e-15!42;UBERON:0004572!6.97e-15!42;UBERON:0002100!7.57e-15!216;UBERON:0002385!8.16e-15!63;UBERON:0001015!8.16e-15!63;UBERON:0000383!8.16e-15!63;UBERON:0001134!1.22e-14!61;UBERON:0002036!1.22e-14!61;UBERON:0003082!1.22e-14!61;UBERON:0001009!1.93e-14!113;UBERON:0004535!2.39e-14!110;UBERON:0000119!3.77e-12!312;UBERON:0000483!5.72e-12!309;UBERON:0000468!1.00e-11!659;UBERON:0000475!1.01e-11!365;UBERON:0003104!1.94e-11!238;UBERON:0009142!1.94e-11!238;UBERON:0004573!3.85e-11!33;UBERON:0004571!3.85e-11!33;UBERON:0000477!1.01e-10!286;UBERON:0003102!2.47e-10!95;UBERON:0000481!3.56e-10!347;UBERON:0000467!5.69e-10!625;UBERON:0000480!9.19e-10!626;UBERON:0000926!1.93e-09!448;UBERON:0004120!1.93e-09!448;UBERON:0006603!1.93e-09!448;UBERON:0006914!4.24e-08!25;UBERON:0004111!7.11e-08!241;UBERON:0003103!1.93e-07!69;UBERON:0001986!2.51e-07!18;UBERON:0004638!2.51e-07!18;UBERON:0004852!2.51e-07!18;UBERON:0000487!3.18e-07!22;UBERON:0002199!4.04e-07!45;UBERON:0002416!4.04e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.60e-13;42!UBERON:0003509;5.60e-13;42!UBERON:0004572;5.60e-13;42!UBERON:0004573;7.88e-11;33!UBERON:0004571;7.88e-11;33!UBERON:0007500;3.49e-10;56!UBERON:0001981;3.49e-10;56!UBERON:0004537;3.49e-10;56!UBERON:0000055;8.15e-09;65!UBERON:0002049;2.22e-08;75!UBERON:0007798;2.22e-08;75!UBERON:0003914;2.16e-07;74!UBERON:0000947;2.51e-07;21!UBERON:0010191;2.51e-07;21!UBERON:0004638;2.71e-07;18!UBERON:0001986;2.71e-07;18!UBERON:0004852;2.71e-07;18!UBERON:0006914;2.85e-07;25!UBERON:0002384;9.64e-07;198 | |||
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| ||
|short_description=p6@PTRF | |||
}} | }} |
Latest revision as of 14:43, 24 September 2015
Short description: | p6@PTRF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PTRF_5end |
Coexpression cluster: | C1434_Olfactory_leiomyoma_Adipocyte_Hair_tenocyte_Preadipocyte_Smooth |
Association with transcript: | 43bp_to_BC004295_5end |
EntrezGene: | PTRF |
HGNC: | 9688 |
UniProt: | Q6NZI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.90e-24 | 121 |
fibroblast | 9.14e-19 | 76 |
lining cell | 1.10e-12 | 58 |
barrier cell | 1.10e-12 | 58 |
muscle precursor cell | 1.20e-12 | 58 |
myoblast | 1.20e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.20e-12 | 58 |
embryonic cell | 1.71e-12 | 250 |
muscle cell | 2.54e-12 | 55 |
smooth muscle cell | 9.24e-11 | 43 |
smooth muscle myoblast | 9.24e-11 | 43 |
electrically responsive cell | 2.60e-10 | 61 |
electrically active cell | 2.60e-10 | 61 |
endothelial cell | 6.92e-10 | 36 |
meso-epithelial cell | 9.18e-09 | 45 |
vascular associated smooth muscle cell | 1.91e-08 | 32 |
endothelial cell of vascular tree | 2.65e-08 | 24 |
blood vessel endothelial cell | 1.44e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.44e-07 | 18 |
skin fibroblast | 3.04e-07 | 23 |