FFCP PHASE1:Hg19::chr2:63815628..63815657,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51057 | |EntrezGene=51057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28027 | |HGNC=28027 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBT2 | |UniProt=F8WBT2 | ||
|association_with_transcript=0bp_to_ENST00000409562,ENST00000409835,ENST00000417238,ENST00000484073_5end | |association_with_transcript=0bp_to_ENST00000409562,ENST00000409835,ENST00000417238,ENST00000484073_5end | ||
|cluster_id=chr2:63815628..63815657,- | |||
|description=CAGE_peak_6_at_WDPCP_5end | |description=CAGE_peak_6_at_WDPCP_5end | ||
|id=chr2:63815628..63815657,- | |id=chr2:63815628..63815657,- | ||
|ontology_enrichment_celltype=CL:0000738!4.93e-13!140;CL:0002087!1.13e-12!119;CL:0002031!2.77e-12!124;CL:0000037!4.64e-10!172;CL:0000566!4.64e-10!172;CL:0000988!7.74e-10!182;CL:0000838!9.89e-10!52;CL:0000542!1.68e-09!53;CL:0000051!1.68e-09!53;CL:0002032!3.52e-08!165;CL:0000837!3.52e-08!165 | |ontology_enrichment_celltype=CL:0000738!4.93e-13!140;CL:0002087!1.13e-12!119;CL:0002031!2.77e-12!124;CL:0000037!4.64e-10!172;CL:0000566!4.64e-10!172;CL:0000988!7.74e-10!182;CL:0000838!9.89e-10!52;CL:0000542!1.68e-09!53;CL:0000051!1.68e-09!53;CL:0002032!3.52e-08!165;CL:0000837!3.52e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.86e-10;13!CL:0000542;1.20e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.93e-10,136;CL:0002031,1.22e-09,120;CL:0002087,1.84e-09,115;CL:0000838,2.18e-09,52;CL:0000236,4.18e-09,14;CL:0000542,4.71e-09,53;CL:0000051,4.71e-09,53;CL:0000037,6.27e-09,168;CL:0000988,3.40e-08,177;CL:0002032,7.87e-07,161;CL:0000837,7.87e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;1.20e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.19e-14!115;UBERON:0001049!5.66e-09!57;UBERON:0005068!5.66e-09!57;UBERON:0006241!5.66e-09!57;UBERON:0007135!5.66e-09!57;UBERON:0002346!6.06e-08!90;UBERON:0003075!1.91e-07!86;UBERON:0007284!1.91e-07!86;UBERON:0002780!2.49e-07!41;UBERON:0001890!2.49e-07!41;UBERON:0006240!2.49e-07!41;UBERON:0000955!4.03e-07!69;UBERON:0006238!4.03e-07!69;UBERON:0002616!6.32e-07!59;UBERON:0002193!8.87e-07!112;UBERON:0003080!9.18e-07!42;UBERON:0002390!9.19e-07!102;UBERON:0003061!9.19e-07!102 | |ontology_enrichment_uberon=UBERON:0007023!1.19e-14!115;UBERON:0001049!5.66e-09!57;UBERON:0005068!5.66e-09!57;UBERON:0006241!5.66e-09!57;UBERON:0007135!5.66e-09!57;UBERON:0002346!6.06e-08!90;UBERON:0003075!1.91e-07!86;UBERON:0007284!1.91e-07!86;UBERON:0002780!2.49e-07!41;UBERON:0001890!2.49e-07!41;UBERON:0006240!2.49e-07!41;UBERON:0000955!4.03e-07!69;UBERON:0006238!4.03e-07!69;UBERON:0002616!6.32e-07!59;UBERON:0002193!8.87e-07!112;UBERON:0003080!9.18e-07!42;UBERON:0002390!9.19e-07!102;UBERON:0003061!9.19e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.72e-09;53!UBERON:0002616;3.72e-09;53!UBERON:0002780;3.08e-08;41!UBERON:0001890;3.08e-08;41!UBERON:0001893;6.93e-08;34!UBERON:0002791;1.22e-07;32!UBERON:0001869;2.90e-07;32!UBERON:0003528;5.97e-07;34!UBERON:0002020;5.97e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.38e-15,114;UBERON:0001049,2.40e-13,56;UBERON:0005068,2.40e-13,56;UBERON:0006241,2.40e-13,56;UBERON:0007135,2.40e-13,56;UBERON:0000073,2.25e-12,53;UBERON:0002616,2.25e-12,53;UBERON:0002780,1.27e-10,41;UBERON:0001890,1.27e-10,41;UBERON:0003080,1.27e-10,41;UBERON:0006240,1.27e-10,41;UBERON:0001893,1.09e-09,34;UBERON:0003075,7.00e-09,82;UBERON:0007284,7.00e-09,82;UBERON:0003528,7.21e-09,34;UBERON:0002020,7.21e-09,34;UBERON:0002346,1.06e-08,86;UBERON:0002791,1.37e-08,32;UBERON:0001869,1.61e-08,32;UBERON:0000955,3.77e-08,68;UBERON:0006238,3.77e-08,68;UBERON:0001017,2.96e-07,81 | |||
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| ||
|short_description=p6@WDPCP | |short_description=p6@WDPCP | ||
}} | }} |
Latest revision as of 22:30, 17 September 2015
Short description: | p6@WDPCP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WDPCP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409562, ENST00000409835, ENST00000417238, ENST00000484073_5end |
EntrezGene: | WDPCP |
HGNC: | 28027 |
UniProt: | F8WBT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.93e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 1.22e-09 | 120 |
nongranular leukocyte | 1.84e-09 | 115 |
lymphoid lineage restricted progenitor cell | 2.18e-09 | 52 |
B cell | 4.18e-09 | 14 |
lymphocyte | 4.71e-09 | 53 |
common lymphoid progenitor | 4.71e-09 | 53 |
hematopoietic stem cell | 6.27e-09 | 168 |
hematopoietic cell | 3.40e-08 | 177 |
hematopoietic oligopotent progenitor cell | 7.87e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.87e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.38e-15 | 114 |
neural tube | 2.40e-13 | 56 |
neural rod | 2.40e-13 | 56 |
future spinal cord | 2.40e-13 | 56 |
neural keel | 2.40e-13 | 56 |
regional part of nervous system | 2.25e-12 | 53 |
regional part of brain | 2.25e-12 | 53 |
regional part of forebrain | 1.27e-10 | 41 |
forebrain | 1.27e-10 | 41 |
anterior neural tube | 1.27e-10 | 41 |
future forebrain | 1.27e-10 | 41 |
telencephalon | 1.09e-09 | 34 |
neural plate | 7.00e-09 | 82 |
presumptive neural plate | 7.00e-09 | 82 |
brain grey matter | 7.21e-09 | 34 |
gray matter | 7.21e-09 | 34 |
neurectoderm | 1.06e-08 | 86 |
regional part of telencephalon | 1.37e-08 | 32 |
cerebral hemisphere | 1.61e-08 | 32 |
brain | 3.77e-08 | 68 |
future brain | 3.77e-08 | 68 |
central nervous system | 2.96e-07 | 81 |