FFCP PHASE1:Hg19::chr2:220309507..220309512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10290 | |EntrezGene=10290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |HGNC=16901 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-254bp_to_ENST00000409595_5end | |association_with_transcript=-254bp_to_ENST00000409595_5end | ||
|cluster_id=chr2:220309507..220309512,+ | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_33_at_SPEG_5end | |description=CAGE_peak_33_at_SPEG_5end | ||
|id=chr2:220309507..220309512,+ | |id=chr2:220309507..220309512,+ | ||
|ontology_enrichment_celltype=CL:0000077!1.02e-07!19 | |ontology_enrichment_celltype=CL:0000077!1.02e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.84e-24;19!CL:0000213;7.44e-07;58!CL:0000215;7.44e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.73e-24,19;CL:0000213,1.35e-08,58;CL:0000215,1.35e-08,58;CL:0000076,5.58e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060084!7.24e-19!3;DOID:127!7.24e-19!3;DOID:0060072!2.77e-14!4 | |ontology_enrichment_disease=DOID:0060084!7.24e-19!3;DOID:127!7.24e-19!3;DOID:0060072!2.77e-14!4 | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.03e-17;3!DOID:127;1.03e-17;3!DOID:0060072;1.21e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.12e-17,3;DOID:127,1.12e-17,3;DOID:0060072,1.29e-13,4 | |||
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|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p33@SPEG | |short_description=p33@SPEG | ||
}} | }} |
Latest revision as of 21:18, 24 September 2015
Short description: | p33@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_SPEG_5end |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | -254bp_to_ENST00000409595_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.73e-24 | 19 |
lining cell | 1.35e-08 | 58 |
barrier cell | 1.35e-08 | 58 |
squamous epithelial cell | 5.58e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.12e-17 | 3 |
leiomyoma | 1.12e-17 | 3 |
benign neoplasm | 1.29e-13 | 4 |