FFCP PHASE1:Hg19::chr22:18632700..18632764,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11274 | |EntrezGene=11274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12616 | |HGNC=12616 | ||
|TSSclassifier=strong | |||
|UniProt=Q53Y90,Q9UMW8 | |UniProt=Q53Y90,Q9UMW8 | ||
|association_with_transcript=0bp_to_NM_017414,uc002zny.2_5end | |association_with_transcript=0bp_to_NM_017414,uc002zny.2_5end | ||
|cluster_id=chr22:18632700..18632764,+ | |||
|description=CAGE_peak_2_at_USP18_5end | |description=CAGE_peak_2_at_USP18_5end | ||
|id=chr22:18632700..18632764,+ | |id=chr22:18632700..18632764,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.89e-19!254;CL:0000071!2.16e-09!18;CL:0002546!2.16e-09!18;CL:0002139!2.98e-09!24;CL:0000076!5.48e-09!62;CL:0000115!6.03e-07!35 | |ontology_enrichment_celltype=CL:0000066!3.89e-19!254;CL:0000071!2.16e-09!18;CL:0002546!2.16e-09!18;CL:0002139!2.98e-09!24;CL:0000076!5.48e-09!62;CL:0000115!6.03e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000071;1.60e-14;18!CL:0002139;5.09e-11;24!CL:1000413;1.76e-08;9!CL:0000076;6.59e-08;63!CL:0000115;7.63e-08;36!CL:0002543;2.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.90e-18,253;CL:0000071,1.49e-14,18;CL:0002546,1.49e-14,18;CL:0000076,1.28e-13,63;CL:0002139,4.98e-11,24;CL:0000115,3.59e-09,36;CL:1000413,1.59e-08,9;CL:0002078,9.24e-08,45;CL:0002543,1.55e-07,6;CL:0000213,9.90e-07,58;CL:0000215,9.90e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.60e-14;18!UBERON:0008947;1.39e-08;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.23e-21!143;DOID:305!6.63e-20!106;DOID:162!2.05e-17!235;DOID:14566!7.16e-16!239 | |ontology_enrichment_disease=DOID:0050687!1.23e-21!143;DOID:305!6.63e-20!106;DOID:162!2.05e-17!235;DOID:14566!7.16e-16!239 | ||
|ontology_enrichment_disease_v019=DOID:305;2.75e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.18e-26,143;DOID:305,8.15e-23,106;DOID:162,9.90e-22,235;DOID:14566,1.27e-20,239 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.16e-09!18;UBERON:0004638!2.16e-09!18;UBERON:0004852!2.16e-09!18;UBERON:0000487!4.18e-08!22;UBERON:0001007!7.51e-08!155;UBERON:0001555!7.51e-08!155;UBERON:0007026!7.51e-08!155;UBERON:0006914!1.58e-07!25;UBERON:0000077!8.30e-07!130 | |ontology_enrichment_uberon=UBERON:0001986!2.16e-09!18;UBERON:0004638!2.16e-09!18;UBERON:0004852!2.16e-09!18;UBERON:0000487!4.18e-08!22;UBERON:0001007!7.51e-08!155;UBERON:0001555!7.51e-08!155;UBERON:0007026!7.51e-08!155;UBERON:0006914!1.58e-07!25;UBERON:0000077!8.30e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.60e-14;18!UBERON:0001986;1.60e-14;18!UBERON:0004852;1.60e-14;18!UBERON:0000487;1.15e-12;22!UBERON:0006914;1.95e-10;25!UBERON:0000490;4.17e-09;33!UBERON:0003915;1.76e-08;9!UBERON:0004700;1.76e-08;9!UBERON:0001917;1.76e-08;9!UBERON:0001737;9.56e-08;9!UBERON:0001557;9.56e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.49e-14,18;UBERON:0001986,1.49e-14,18;UBERON:0004852,1.49e-14,18;UBERON:0000487,1.07e-12,22;UBERON:0006914,1.82e-10,25;UBERON:0003915,1.59e-08,9;UBERON:0004700,1.59e-08,9;UBERON:0001917,1.59e-08,9;UBERON:0001737,3.29e-08,9;UBERON:0008947,6.32e-08,38;UBERON:0003258,6.32e-08,38 | |||
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| ||
|short_description=p2@USP18 | |short_description=p2@USP18 | ||
}} | }} |
Latest revision as of 02:15, 19 September 2015
Short description: | p2@USP18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_017414, uc002zny.2_5end |
EntrezGene: | USP18 |
HGNC: | 12616 |
UniProt: | Q53Y90Q9UMW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.90e-18 | 253 |
blood vessel endothelial cell | 1.49e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.49e-14 | 18 |
squamous epithelial cell | 1.28e-13 | 63 |
endothelial cell of vascular tree | 4.98e-11 | 24 |
endothelial cell | 3.59e-09 | 36 |
endothelial cell of artery | 1.59e-08 | 9 |
meso-epithelial cell | 9.24e-08 | 45 |
vein endothelial cell | 1.55e-07 | 6 |
lining cell | 9.90e-07 | 58 |
barrier cell | 9.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.49e-14 | 18 |
endothelium | 1.49e-14 | 18 |
cardiovascular system endothelium | 1.49e-14 | 18 |
simple squamous epithelium | 1.07e-12 | 22 |
squamous epithelium | 1.82e-10 | 25 |
endothelial tube | 1.59e-08 | 9 |
arterial system endothelium | 1.59e-08 | 9 |
endothelium of artery | 1.59e-08 | 9 |
larynx | 3.29e-08 | 9 |
respiratory primordium | 6.32e-08 | 38 |
endoderm of foregut | 6.32e-08 | 38 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.18e-26 | 143 |
carcinoma | 8.15e-23 | 106 |
cancer | 9.90e-22 | 235 |
disease of cellular proliferation | 1.27e-20 | 239 |