FFCP PHASE1:Hg19::chr17:39092906..39092924,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:39092906..39092924,-
|short_description=p1@KRT23
|description=CAGE_peak_1_at_KRT23_5end
|association_with_transcript=280bp_to_uc010cxg.2_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25984 | |EntrezGene=25984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6438 | |HGNC=6438 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=280bp_to_uc010cxg.2_5end | |||
|cluster_id=chr17:39092906..39092924,- | |||
|description=CAGE_peak_1_at_KRT23_5end | |||
|id=chr17:39092906..39092924,- | |||
|ontology_enrichment_celltype=CL:0002057!8.52e-19!42;CL:0000860!1.75e-16!45;CL:0000766!2.29e-11!76;CL:0002076!1.33e-09!43;CL:0000223!2.09e-09!59;CL:0002009!2.48e-08!65;CL:0000557!2.62e-08!71;CL:0002194!1.69e-07!63;CL:0000576!1.69e-07!63;CL:0000040!1.69e-07!63;CL:0000559!1.69e-07!63;CL:0000839!3.24e-07!70;CL:0000763!5.33e-07!112;CL:0000049!5.33e-07!112;CL:0000094!7.91e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.99e-24;33!CL:0002057;6.99e-24;33!CL:0000473;1.22e-15;39!CL:0000234;1.22e-15;39!CL:0000576;4.30e-11;48!CL:0002076;4.81e-10;42!CL:0000766;5.32e-09;69!CL:0000094;7.81e-09;8!CL:0000622;9.94e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.19e-20,42;CL:0002057,1.19e-20,42;CL:0000766,4.48e-17,72;CL:0000473,1.23e-16,48;CL:0000234,1.23e-16,48;CL:0002076,7.89e-13,42;CL:0000557,1.17e-12,67;CL:0000223,1.78e-12,58;CL:0002009,2.05e-12,61;CL:0000763,3.10e-11,108;CL:0000049,3.10e-11,108;CL:0002194,3.52e-11,59;CL:0000576,3.52e-11,59;CL:0000040,3.52e-11,59;CL:0000559,3.52e-11,59;CL:0000839,4.08e-11,66;CL:0000094,8.78e-09,8;CL:0000738,2.60e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-15;42!CL:0000223;5.28e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.88e-10!102;UBERON:0003061!1.88e-10!102;UBERON:0002193!8.82e-10!112;UBERON:0004119!1.08e-07!169;UBERON:0000925!1.08e-07!169;UBERON:0006595!1.08e-07!169;UBERON:0000926!6.81e-07!448;UBERON:0004120!6.81e-07!448;UBERON:0006603!6.81e-07!448;UBERON:0001044!6.82e-07!6;UBERON:0003293!6.82e-07!6;UBERON:0003294!6.82e-07!6;UBERON:0010047!6.82e-07!6;UBERON:0000167!6.82e-07!6;UBERON:0000466!7.06e-07!126;UBERON:0000468!7.68e-07!659;UBERON:0000464!8.41e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;7.16e-09;6!UBERON:0003293;7.16e-09;6!UBERON:0003294;7.16e-09;6!UBERON:0010047;7.16e-09;6!UBERON:0003408;7.16e-09;6!UBERON:0000167;7.16e-09;6!UBERON:0000178;9.88e-07;15!UBERON:0000179;9.88e-07;15!UBERON:0000463;9.88e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.64e-15,98;UBERON:0003061,2.64e-15,98;UBERON:0002193,2.85e-13,108;UBERON:0002371,7.34e-10,76;UBERON:0002405,6.19e-09,93;UBERON:0001044,7.18e-09,6;UBERON:0003293,7.18e-09,6;UBERON:0003294,7.18e-09,6;UBERON:0010047,7.18e-09,6;UBERON:0000167,7.18e-09,6;UBERON:0001474,2.20e-08,82;UBERON:0000161,7.58e-08,36;UBERON:0003408,1.77e-07,10;UBERON:0004119,2.12e-07,160;UBERON:0000925,2.12e-07,160;UBERON:0006595,2.12e-07,160;UBERON:0000166,2.67e-07,22;UBERON:0001004,8.76e-07,74;UBERON:0004765,8.93e-07,90;UBERON:0000178,9.79e-07,15;UBERON:0000179,9.79e-07,15;UBERON:0000463,9.79e-07,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0,1.74467704820074,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.15148819429164,3.40595471295367,6.43594857135249,3.91567694411725,24.403764671008,0,0,0,2.21598163412751,0.802177789880567,2.82114131930607,0,0,0,7.12451370019867,6.04601509902095,15.0402117936446,9.52959051313307,7.81218987241469,15.1756121738601,3.74000110018796,3.07392847834921,13.0065226438722,26.8901630974562,15.4916324060118,40.6279459783025,7.15320890261898,5.73102915121476,15.955367395601,21.7319563583341,11.5534449747394,40.2782389253396,2.63881040149373,5.38551875578406,6.81959600852311,31.9230162491442,14.1846306172785,47.9573131726593,2.51248665256743,1.5644487552606,5.42972111762792,26.0321786132349,19.5187147073409,59.1784664514454,0.211255286311942,0.212604299965044,0,1.68492946719743,1.95229960693958,1.44653028027372,0.285012743741249,0,0.182664153764634,0,1.63841583378639,0,1.70692089026603,0,0.574752439954483,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35517607169996,0,1.24930726552346,1.4206635122641,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.72038491523742,10.5645633604837,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,86.9750755078017,170.623316225263,33.5792420149751,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.847727604638247,0,0.103052529238439,0.257640540045629,2.23340227597908,0,0.389748020644795,0,0.0920498986422993,0,0,0.10075209822764,0,1.35282597214308,1.63647672354501,0,0,0.132529768321485,0.348581828608555,1.96956004529204,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.8045661152634,0.171567810298526,7.35326912237791,22.4803506515239,1.70899253099772,0.185176890317059,0,0,0,0,0.117408694235822,0.144366447761074,0,0.761016608938393,5.53143078571493,8.58486162094873,0,0,0,0,0,0,6.26909658919938,2.90633938513962,0.383382679165211,0,0,3.31724984865235,2.01767934783746,2.14612136824846,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,3.08214483825575,0,0,0,0,0.128343036279748,0,0,0,0,0,94.374885017345,77.7819793930465,338.577474477241,0,0,0,0,0,0,0,0,0,0,0.664225598535437,1.47495334833363,0.0868836144680828,0,0,0.413536052245775,7.76571122947021,0.960548020230999,0.606255142892519,0,1.20956117331872,0.992431231275107,0,0,3.20347873139252,0.511707249066704,0.482561763430822,1.48418066444991,0,0,0.0821271560138091,0,0,30.0940029483139,31.4795158376157,91.8968269580245,0,0,0,22.5599806453706,26.5702913010231,2.35304930753057,8.76835347919564,9.92185311593032,0,0,0,0,0,0.501689773854853,4.33289664176565,4.98645605357235,0.223874754722178,0,0,0,0,0,81.608481224996,0,0,8.03971753194641,20.1518676271322,0,0,0.462145851343933,0,0,0.107420244868274,0,0.0852266274161009,0,8.26424576804891,1.53752053892085,1.78657797492418,7.99146468758844,1.85938219718914,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,1.47775344708365,0.987884678879706,0,0,7.89021324349199,16.0872546128589,20.6892871236513,81.8109628750211,10.3321289441095,16.8471475667626,49.6641771961077,55.1336160496703,46.1777324401274,48.936781257112,39.3056559150172,46.2169644388111,46.4839368587399,60.9564912521154,42.122452104573,34.1043825806536,0,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0.313359791546046,2.50634477090067,0,0.963528450622197,0,1.70338495076131,28.5109436147285,0,0,0,1.36771666781428,0,0,0,0,0,0,0.146508179271894,0,0,0,69.2359005739301,36.8236204232472,43.3096589959917,0,0,15.5832187032068,0,0,2.78947183551498,0.828851746593443,0,0,0,0,0.629078458031288,3.22238114416096,0,2.07151151837561,28.7379710816328,0,0,0,0,0.260427761085233,13.1189999994294,5.07499702804355,0.1137934482855,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,82.1205853800973,7.69502585037971,0.113942055847001,26.2842851002389,7.7191574192404,7.27937391877454,129.514470851159,39.6617579430064,57.5677558100125,0,0,0,0,0,0,0,0,0,0.163232808159148,20.4961953579214,0,0,0.0884575645033392,4.27721101453538,0,0,0,0,1.60515529459758,0,0,76.8961952403113,0,4.3404284313433,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,9.39211501898316,0,8.50442717842141,7.83939179315021,3.22119064347489,2.27144668714639,0,0,0,0,1.74580229679155,0,8.3612874088797,0,0,0,0.586654148204409,0.480952921509202,5.54977786322317,0,0.144090417154106,0.229073192331831,0,0,0,2.35694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.599037001496973,0.429226048136571,0,0.0671834724867263,0,23.2991899054908,30.7254410998172,27.7741442744531,28.6465061380286,0.196854963029498,0,0,0,0,0,0,3.82455615637551,85.8920169559324,0,29.8536871963347,0.157611414598396,0.209818352539992,0.105600336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| ||
|short_description=p1@KRT23 | |||
}} | }} |
Latest revision as of 04:07, 20 September 2015
Short description: | p1@KRT23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT23_5end |
Coexpression cluster: | NA |
Association with transcript: | 280bp_to_uc010cxg.2_5end |
EntrezGene: | KRT23 |
HGNC: | 6438 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.19e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-20 | 42 |
myeloid leukocyte | 4.48e-17 | 72 |
defensive cell | 1.23e-16 | 48 |
phagocyte | 1.23e-16 | 48 |
endo-epithelial cell | 7.89e-13 | 42 |
granulocyte monocyte progenitor cell | 1.17e-12 | 67 |
endodermal cell | 1.78e-12 | 58 |
macrophage dendritic cell progenitor | 2.05e-12 | 61 |
myeloid cell | 3.10e-11 | 108 |
common myeloid progenitor | 3.10e-11 | 108 |
monopoietic cell | 3.52e-11 | 59 |
monocyte | 3.52e-11 | 59 |
monoblast | 3.52e-11 | 59 |
promonocyte | 3.52e-11 | 59 |
myeloid lineage restricted progenitor cell | 4.08e-11 | 66 |
granulocyte | 8.78e-09 | 8 |
leukocyte | 2.60e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.64e-15 | 98 |
blood island | 2.64e-15 | 98 |
hemolymphoid system | 2.85e-13 | 108 |
bone marrow | 7.34e-10 | 76 |
immune system | 6.19e-09 | 93 |
saliva-secreting gland | 7.18e-09 | 6 |
gland of oral region | 7.18e-09 | 6 |
gland of foregut | 7.18e-09 | 6 |
oral gland | 7.18e-09 | 6 |
oral cavity | 7.18e-09 | 6 |
bone element | 2.20e-08 | 82 |
orifice | 7.58e-08 | 36 |
gland of gut | 1.77e-07 | 10 |
endoderm-derived structure | 2.12e-07 | 160 |
endoderm | 2.12e-07 | 160 |
presumptive endoderm | 2.12e-07 | 160 |
oral opening | 2.67e-07 | 22 |
respiratory system | 8.76e-07 | 74 |
skeletal element | 8.93e-07 | 90 |
blood | 9.79e-07 | 15 |
haemolymphatic fluid | 9.79e-07 | 15 |
organism substance | 9.79e-07 | 15 |