FFCP PHASE1:Hg19::chr17:38978621..38978636,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:38978621..38978636,-
|short_description=p8@KRT10
|description=CAGE_peak_8_at_KRT10_5end
|association_with_transcript=-170bp_to_M19156_5end
|EntrezGene=38...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3858 | |EntrezGene=3858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6413 | |HGNC=6413 | ||
|TSSclassifier=strong | |||
|UniProt=P13645 | |UniProt=P13645 | ||
|association_with_transcript=-170bp_to_M19156_5end | |||
|cluster_id=chr17:38978621..38978636,- | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_8_at_KRT10_5end | |||
|id=chr17:38978621..38978636,- | |||
|ontology_enrichment_celltype=CL:0000622!1.46e-25!5;CL:0002623!2.26e-24!3;CL:0000154!2.38e-21!6;CL:0001014!8.55e-17!2;CL:0001016!8.55e-17!2;CL:0000150!2.63e-14!9;CL:0002150!5.71e-11!3;CL:0000861!5.71e-11!3;CL:0002251!3.88e-09!21;CL:0000453!3.06e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000622;3.81e-40;5!CL:0000154;1.31e-33;6!CL:0002623;1.58e-30;3!CL:0000150;1.08e-22;9!CL:0001014;2.74e-12;2!CL:0001016;2.74e-12;2!CL:0000317;3.43e-12;2!CL:1000448;3.43e-12;2!CL:0002308;3.43e-12;2!CL:0002140;3.43e-12;2!CL:0000151;6.27e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,3.33e-40,5;CL:0000154,1.17e-33,6;CL:0002623,1.47e-30,3;CL:0000150,1.01e-22,9;CL:0001014,2.59e-12,2;CL:0001016,2.59e-12,2;CL:0000317,3.24e-12,2;CL:1000448,3.24e-12,2;CL:0002308,3.24e-12,2;CL:0002140,3.24e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.67e-23;1!UBERON:0000358;2.34e-23;1!UBERON:0005425;5.73e-23;1!UBERON:0003056;1.46e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!3.94e-19!10;UBERON:0001044!1.77e-12!6;UBERON:0003293!1.77e-12!6;UBERON:0003294!1.77e-12!6;UBERON:0010047!1.77e-12!6;UBERON:0000167!1.77e-12!6;UBERON:0007029!1.74e-09!1;UBERON:0000989!1.89e-09!1;UBERON:0008811!1.89e-09!1;UBERON:0006258!1.89e-09!1;UBERON:0005876!1.89e-09!1;UBERON:0004874!1.89e-09!1;UBERON:0000941!3.05e-09!1;UBERON:0004904!3.05e-09!1;UBERON:0002464!3.05e-09!1;UBERON:0001021!3.05e-09!1;UBERON:0001785!3.05e-09!1;UBERON:0006834!9.17e-09!1;UBERON:0000997!1.07e-08!1;UBERON:0005056!1.07e-08!1;UBERON:0002370!2.48e-08!4;UBERON:0005058!2.48e-08!4;UBERON:0009113!2.48e-08!4;UBERON:0003295!2.48e-08!4;UBERON:0005562!2.48e-08!4;UBERON:0000974!2.99e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.34e-23;1!UBERON:0000989;1.67e-23;1!UBERON:0008811;1.67e-23;1!UBERON:0000941;5.73e-23;1!UBERON:0001785;5.73e-23;1!UBERON:0002464;5.73e-23;1!UBERON:0004904;5.73e-23;1!UBERON:0001021;5.73e-23;1!UBERON:0001044;8.09e-16;6!UBERON:0003293;8.09e-16;6!UBERON:0003294;8.09e-16;6!UBERON:0010047;8.09e-16;6!UBERON:0003408;8.09e-16;6!UBERON:0000167;8.09e-16;6!UBERON:0002419;3.43e-12;2!UBERON:0003714;3.43e-12;2!UBERON:0005162;3.43e-12;2!UBERON:0000122;3.43e-12;2!UBERON:0007771;3.43e-12;2!UBERON:0003297;3.43e-12;2!UBERON:0001821;3.43e-12;2!UBERON:0003487;3.43e-12;2!UBERON:0001820;3.43e-12;2!UBERON:0001041;2.56e-07;14!UBERON:0002365;2.84e-07;31!UBERON:0002330;2.84e-07;31!UBERON:0000014;6.87e-07;4!UBERON:0001003;7.98e-07;15!UBERON:0007376;7.98e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.34e-23,1;UBERON:0000989,1.67e-23,1;UBERON:0008811,1.67e-23,1;UBERON:0006258,1.67e-23,1;UBERON:0005876,1.67e-23,1;UBERON:0004874,1.67e-23,1;UBERON:0000941,6.40e-23,1;UBERON:0001785,6.40e-23,1;UBERON:0002464,6.40e-23,1;UBERON:0004904,6.40e-23,1;UBERON:0001021,6.40e-23,1;UBERON:0003902,6.40e-23,1;UBERON:0005425,6.40e-23,1;UBERON:0001044,7.79e-16,6;UBERON:0003293,7.79e-16,6;UBERON:0003294,7.79e-16,6;UBERON:0010047,7.79e-16,6;UBERON:0000167,7.79e-16,6;UBERON:0002419,3.24e-12,2;UBERON:0007771,3.24e-12,2;UBERON:0003297,3.24e-12,2;UBERON:0001821,3.24e-12,2;UBERON:0003487,3.24e-12,2;UBERON:0001820,3.24e-12,2;UBERON:0005089,3.24e-12,2;UBERON:0005088,3.24e-12,2;UBERON:0003714,3.62e-12,2;UBERON:0005162,3.62e-12,2;UBERON:0000122,3.62e-12,2;UBERON:0003408,6.78e-10,10;UBERON:0002365,4.58e-07,31;UBERON:0002330,4.58e-07,31;UBERON:0000014,6.87e-07,4;UBERON:0001003,7.86e-07,15;UBERON:0007376,7.86e-07,15;UBERON:0007383,7.86e-07,15 | |||
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|short_description=p8@KRT10 | |||
}} | }} |
Latest revision as of 03:57, 20 September 2015
Short description: | p8@KRT10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KRT10_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | -170bp_to_M19156_5end |
EntrezGene: | KRT10 |
HGNC: | 6413 |
UniProt: | P13645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 3.33e-40 | 5 |
protein secreting cell | 1.17e-33 | 6 |
acinar cell of salivary gland | 1.47e-30 | 3 |
glandular epithelial cell | 1.01e-22 | 9 |
CD1a-positive Langerhans cell | 2.59e-12 | 2 |
immature CD1a-positive Langerhans cell | 2.59e-12 | 2 |
sebum secreting cell | 3.24e-12 | 2 |
epithelial cell of sweat gland | 3.24e-12 | 2 |
epithelial cell of skin gland | 3.24e-12 | 2 |
acinar cell of sebaceous gland | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
surface | 1.34e-23 | 1 |
penis | 1.67e-23 | 1 |
intromittent organ | 1.67e-23 | 1 |
lateral plate mesenchyme | 1.67e-23 | 1 |
undifferentiated genital tubercle | 1.67e-23 | 1 |
somatopleure | 1.67e-23 | 1 |
cranial nerve II | 6.40e-23 | 1 |
cranial nerve | 6.40e-23 | 1 |
nerve trunk | 6.40e-23 | 1 |
nerve connecting eye with brain | 6.40e-23 | 1 |
nerve | 6.40e-23 | 1 |
retinal neural layer | 6.40e-23 | 1 |
presumptive neural retina | 6.40e-23 | 1 |
saliva-secreting gland | 7.79e-16 | 6 |
gland of oral region | 7.79e-16 | 6 |
gland of foregut | 7.79e-16 | 6 |
oral gland | 7.79e-16 | 6 |
oral cavity | 7.79e-16 | 6 |
skin gland | 3.24e-12 | 2 |
epidermis gland | 3.24e-12 | 2 |
gland of integumental system | 3.24e-12 | 2 |
sebaceous gland | 3.24e-12 | 2 |
skin sebaceous gland | 3.24e-12 | 2 |
sweat gland | 3.24e-12 | 2 |
sweat gland placode | 3.24e-12 | 2 |
sebaceous gland placode | 3.24e-12 | 2 |
neural tissue | 3.62e-12 | 2 |
multi cell component structure | 3.62e-12 | 2 |
neuron projection bundle | 3.62e-12 | 2 |
gland of gut | 6.78e-10 | 10 |
exocrine gland | 4.58e-07 | 31 |
exocrine system | 4.58e-07 | 31 |
zone of skin | 6.87e-07 | 4 |
skin epidermis | 7.86e-07 | 15 |
outer epithelium | 7.86e-07 | 15 |
enveloping layer of ectoderm | 7.86e-07 | 15 |