FFCP PHASE1:Hg19::chr17:38975365..38975409,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38975365..38975409,+
|short_description=p1@TMEM99
|description=CAGE_peak_1_at_TMEM99_5end
|association_with_transcript=0bp_to_ENST00000301665,NM_145274,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147184 | |EntrezGene=147184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28305 | |HGNC=28305 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N816 | |UniProt=Q8N816 | ||
|association_with_transcript=0bp_to_ENST00000301665,NM_145274,uc002hvj.1_5end | |||
|cluster_id=chr17:38975365..38975409,+ | |||
|description=CAGE_peak_1_at_TMEM99_5end | |||
|id=chr17:38975365..38975409,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.39e-13!254;CL:0002076!1.06e-09!43;CL:0000220!1.08e-09!246;CL:0002321!3.15e-09!248;CL:0000223!1.42e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.13e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.15e-13,253;CL:0002076,3.42e-09,42;CL:0002321,4.03e-09,250;CL:0000223,3.92e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.56e-08!143;DOID:305!3.73e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.54e-08,143;DOID:305,3.68e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.84e-12!169;UBERON:0000925!9.84e-12!169;UBERON:0006595!9.84e-12!169;UBERON:0003104!4.21e-11!238;UBERON:0009142!4.21e-11!238;UBERON:0001007!5.84e-11!155;UBERON:0001555!5.84e-11!155;UBERON:0007026!5.84e-11!155;UBERON:0002100!1.45e-09!216;UBERON:0003102!2.87e-09!95;UBERON:0000481!7.02e-09!347;UBERON:0000077!7.08e-09!130;UBERON:0004921!7.47e-09!129;UBERON:0004185!7.47e-09!129;UBERON:0001004!8.13e-09!72;UBERON:0000464!2.34e-08!104;UBERON:0000475!2.39e-08!365;UBERON:0000466!4.03e-08!126;UBERON:0001048!2.11e-07!168;UBERON:0001041!5.22e-07!98;UBERON:0005178!9.72e-07!34;UBERON:0002224!9.72e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.82e-11,160;UBERON:0000925,2.82e-11,160;UBERON:0006595,2.82e-11,160;UBERON:0001007,1.05e-10,145;UBERON:0001555,1.05e-10,145;UBERON:0007026,1.05e-10,145;UBERON:0003102,1.59e-10,99;UBERON:0002100,3.84e-09,199;UBERON:0001004,6.42e-09,74;UBERON:0004921,2.50e-08,118;UBERON:0001048,2.37e-07,160;UBERON:0005157,4.56e-07,47;UBERON:0000161,8.16e-07,36 | |||
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| ||
|short_description=p1@TMEM99 | |||
}} | }} |
Latest revision as of 03:34, 20 September 2015
Short description: | p1@TMEM99 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM99_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000301665, NM_145274, uc002hvj.1_5end |
EntrezGene: | TMEM99 |
HGNC: | 28305 |
UniProt: | Q8N816 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.15e-13 | 253 |
endo-epithelial cell | 3.42e-09 | 42 |
embryonic cell | 4.03e-09 | 250 |
endodermal cell | 3.92e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.82e-11 | 160 |
endoderm | 2.82e-11 | 160 |
presumptive endoderm | 2.82e-11 | 160 |
digestive system | 1.05e-10 | 145 |
digestive tract | 1.05e-10 | 145 |
primitive gut | 1.05e-10 | 145 |
surface structure | 1.59e-10 | 99 |
trunk | 3.84e-09 | 199 |
respiratory system | 6.42e-09 | 74 |
subdivision of digestive tract | 2.50e-08 | 118 |
primordium | 2.37e-07 | 160 |
epithelial fold | 4.56e-07 | 47 |
orifice | 8.16e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.54e-08 | 143 |
carcinoma | 3.68e-08 | 106 |