FFCP PHASE1:Hg19::chr20:35807491..35807503,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6185 | |EntrezGene=6185 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10382 | |HGNC=10382 | ||
|TSSclassifier=strong | |||
|UniProt=P04844,Q5JYR6 | |UniProt=P04844,Q5JYR6 | ||
|association_with_transcript=35bp_to_NM_001135771,NM_002951,uc002xgo.3,uc002xgp.2,uc002xgq.2,uc010gfw.2_5end | |association_with_transcript=35bp_to_NM_001135771,NM_002951,uc002xgo.3,uc002xgp.2,uc002xgq.2,uc010gfw.2_5end | ||
|cluster_id=chr20:35807491..35807503,+ | |||
|description=CAGE_peak_3_at_RPN2_5end | |description=CAGE_peak_3_at_RPN2_5end | ||
|id=chr20:35807491..35807503,+ | |id=chr20:35807491..35807503,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.01e-10!254;CL:0000548!5.59e-10!679;CL:0000004!5.59e-10!679;CL:0000255!5.59e-10!679;CL:0000012!7.18e-10!682;CL:0002321!1.55e-09!248;CL:0000220!1.71e-09!246;CL:0000222!2.24e-08!119;CL:0000055!2.47e-08!180 | |ontology_enrichment_celltype=CL:0000066!3.01e-10!254;CL:0000548!5.59e-10!679;CL:0000004!5.59e-10!679;CL:0000255!5.59e-10!679;CL:0000012!7.18e-10!682;CL:0002321!1.55e-09!248;CL:0000220!1.71e-09!246;CL:0000222!2.24e-08!119;CL:0000055!2.47e-08!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.65e-10,253;CL:0002321,1.48e-09,250;CL:0000222,2.36e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.68e-12!143;DOID:162!1.64e-11!235;DOID:14566!2.34e-11!239;DOID:305!5.50e-08!106 | |ontology_enrichment_disease=DOID:0050687!6.68e-12!143;DOID:162!1.64e-11!235;DOID:14566!2.34e-11!239;DOID:305!5.50e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.13e-12,143;DOID:162,1.83e-11,235;DOID:14566,2.60e-11,239;DOID:305,5.85e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000490!6.81e-09!138;UBERON:0003104!9.70e-09!238;UBERON:0009142!9.70e-09!238;UBERON:0003914!1.62e-08!118;UBERON:0002100!3.29e-08!216;UBERON:0005256!1.29e-07!143;UBERON:0004872!6.18e-07!84 | |ontology_enrichment_uberon=UBERON:0000490!6.81e-09!138;UBERON:0003104!9.70e-09!238;UBERON:0009142!9.70e-09!238;UBERON:0003914!1.62e-08!118;UBERON:0002100!3.29e-08!216;UBERON:0005256!1.29e-07!143;UBERON:0004872!6.18e-07!84 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.11e-09,117;UBERON:0000490,1.55e-08,148;UBERON:0002100,2.72e-08,199;UBERON:0005256,5.16e-08,122 | |||
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| ||
|short_description=p3@RPN2 | |short_description=p3@RPN2 | ||
}} | }} |
Latest revision as of 00:39, 16 September 2015
Short description: | p3@RPN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_NM_001135771, NM_002951, uc002xgo.3, uc002xgp.2, uc002xgq.2, uc010gfw.2_5end |
EntrezGene: | RPN2 |
HGNC: | 10382 |
UniProt: | P04844Q5JYR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.65e-10 | 253 |
embryonic cell | 1.48e-09 | 250 |
mesodermal cell | 2.36e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 7.11e-09 | 117 |
unilaminar epithelium | 1.55e-08 | 148 |
trunk | 2.72e-08 | 199 |
trunk mesenchyme | 5.16e-08 | 122 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.13e-12 | 143 |
cancer | 1.83e-11 | 235 |
disease of cellular proliferation | 2.60e-11 | 239 |
carcinoma | 5.85e-08 | 106 |