FFCP PHASE1:Hg19::chr1:86861948..86862020,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57489 | |EntrezGene=57489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29225 | |HGNC=29225 | ||
|TSSclassifier=strong | |||
|UniProt=G5E956,B4DZ83,E9PMV9,E9PNP0,E9PJZ1,Q9ULJ1 | |UniProt=G5E956,B4DZ83,E9PMV9,E9PNP0,E9PJZ1,Q9ULJ1 | ||
|association_with_transcript=0bp_to_ENST00000294678,ENST00000317336,ENST00000370567,ENST00000394731,ENST00000441121,ENST00000478286,ENST00000479890,ENST00000488879,uc001dll.1,uc001dlm.1,uc001dln.2,uc001dlo.2,uc001dlp.2,uc001dlq.1,uc009wcr.1,uc010osg.1_5end | |association_with_transcript=0bp_to_ENST00000294678,ENST00000317336,ENST00000370567,ENST00000394731,ENST00000441121,ENST00000478286,ENST00000479890,ENST00000488879,uc001dll.1,uc001dlm.1,uc001dln.2,uc001dlo.2,uc001dlp.2,uc001dlq.1,uc009wcr.1,uc010osg.1_5end | ||
|cluster_id=chr1:86861948..86862020,- | |||
|description=CAGE_peak_1_at_ODF2L_5end | |description=CAGE_peak_1_at_ODF2L_5end | ||
|id=chr1:86861948..86862020,- | |id=chr1:86861948..86862020,- | ||
|ontology_enrichment_celltype=CL:0000791!2.86e-09!18;CL:0000789!2.86e-09!18;CL:0002420!2.86e-09!18;CL:0002419!2.86e-09!18;CL:0000790!2.86e-09!18;CL:0000625!2.60e-07!11 | |ontology_enrichment_celltype=CL:0000791!2.86e-09!18;CL:0000789!2.86e-09!18;CL:0002420!2.86e-09!18;CL:0002419!2.86e-09!18;CL:0000790!2.86e-09!18;CL:0000625!2.60e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.64e-09;18!CL:0000789;2.64e-09;18!CL:0002419;2.64e-09;18!CL:0000625;2.41e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.84e-09,18;CL:0000789,2.84e-09,18;CL:0002420,2.84e-09,18;CL:0002419,2.84e-09,18;CL:0000790,2.84e-09,18;CL:0000625,2.60e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.64e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.98e-07!59;UBERON:0003080!3.68e-07!42;UBERON:0001049!4.07e-07!57;UBERON:0005068!4.07e-07!57;UBERON:0006241!4.07e-07!57;UBERON:0007135!4.07e-07!57;UBERON:0002780!6.34e-07!41;UBERON:0001890!6.34e-07!41;UBERON:0006240!6.34e-07!41;UBERON:0001017!8.81e-07!82 | |ontology_enrichment_uberon=UBERON:0002616!1.98e-07!59;UBERON:0003080!3.68e-07!42;UBERON:0001049!4.07e-07!57;UBERON:0005068!4.07e-07!57;UBERON:0006241!4.07e-07!57;UBERON:0007135!4.07e-07!57;UBERON:0002780!6.34e-07!41;UBERON:0001890!6.34e-07!41;UBERON:0006240!6.34e-07!41;UBERON:0001017!8.81e-07!82 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,6.34e-07,41;UBERON:0001890,6.34e-07,41;UBERON:0003080,6.34e-07,41;UBERON:0006240,6.34e-07,41;UBERON:0001049,6.79e-07,56;UBERON:0005068,6.79e-07,56;UBERON:0006241,6.79e-07,56;UBERON:0007135,6.79e-07,56 | |||
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| ||
|short_description=p1@ODF2L | |short_description=p1@ODF2L | ||
}} | }} |
Latest revision as of 14:17, 19 September 2015
Short description: | p1@ODF2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ODF2L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000294678, ENST00000317336, ENST00000370567, ENST00000394731, ENST00000441121, ENST00000478286, ENST00000479890, ENST00000488879, uc001dll.1, uc001dlm.1, uc001dln.2, uc001dlo.2, uc001dlp.2, uc001dlq.1, uc009wcr.1, uc010osg.1_5end |
EntrezGene: | ODF2L |
HGNC: | 29225 |
UniProt: | G5E956B4DZ83E9PMV9E9PNP0E9PJZ1Q9ULJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.84e-09 | 18 |
alpha-beta T cell | 2.84e-09 | 18 |
immature T cell | 2.84e-09 | 18 |
mature T cell | 2.84e-09 | 18 |
immature alpha-beta T cell | 2.84e-09 | 18 |
CD8-positive, alpha-beta T cell | 2.60e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 6.34e-07 | 41 |
forebrain | 6.34e-07 | 41 |
anterior neural tube | 6.34e-07 | 41 |
future forebrain | 6.34e-07 | 41 |
neural tube | 6.79e-07 | 56 |
neural rod | 6.79e-07 | 56 |
future spinal cord | 6.79e-07 | 56 |
neural keel | 6.79e-07 | 56 |