FFCP PHASE1:Hg19::chr1:80167417..80167424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:80167417..80167424,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr1:80167417..80167424,- | |description=CAGE_peak_at_chr1:80167417..80167424,- | ||
|id=chr1:80167417..80167424,- | |id=chr1:80167417..80167424,- | ||
|ontology_enrichment_celltype=CL:0002322!2.24e-18!5;CL:0002149!9.62e-16!6;CL:0002255!9.62e-16!6;CL:0000039!7.05e-14!7;CL:0000586!7.05e-14!7;CL:0000540!1.43e-07!6;CL:0000031!1.43e-07!6;CL:0000404!1.43e-07!6 | |ontology_enrichment_celltype=CL:0002322!2.24e-18!5;CL:0002149!9.62e-16!6;CL:0002255!9.62e-16!6;CL:0000039!7.05e-14!7;CL:0000586!7.05e-14!7;CL:0000540!1.43e-07!6;CL:0000031!1.43e-07!6;CL:0000404!1.43e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.63e-37;7!CL:0000586;4.63e-37;7!CL:0002149;9.95e-20;6!CL:0002255;9.95e-20;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.92e-37,7;CL:0000586,4.92e-37,7;CL:0002149,9.49e-20,6;CL:0002255,9.49e-20,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.17e-26;10!UBERON:0005564;3.17e-26;10!UBERON:0005795;2.90e-12;10!UBERON:0006603;1.29e-10;65 | |||
|ontology_enrichment_disease=DOID:3001!9.62e-16!6;DOID:3095!1.92e-11!22;DOID:2994!1.92e-11!22 | |ontology_enrichment_disease=DOID:3001!9.62e-16!6;DOID:3095!1.92e-11!22;DOID:2994!1.92e-11!22 | ||
|ontology_enrichment_disease_v019=DOID:3001;9.95e-20;6!DOID:3095;2.30e-12;22!DOID:2994;2.30e-12;22!DOID:299;6.58e-11;25!DOID:193;1.81e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,9.49e-20,6;DOID:3095,2.35e-12,22;DOID:2994,2.35e-12,22;DOID:299,6.47e-11,25;DOID:305,7.18e-10,106;DOID:193,1.81e-09,29;DOID:0050687,2.36e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.26e-12!8;UBERON:0003135!5.05e-09!11;UBERON:0003133!3.11e-07!48 | |ontology_enrichment_uberon=UBERON:0000473!3.26e-12!8;UBERON:0003135!5.05e-09!11;UBERON:0003133!3.11e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.50e-32;8!UBERON:0003135;6.35e-24;11!UBERON:0000991;6.44e-13;21!UBERON:0003101;2.30e-12;22!UBERON:0000079;2.30e-12;22!UBERON:0003133;3.73e-12;44!UBERON:0002369;7.42e-11;3!UBERON:0001235;7.42e-11;3!UBERON:0006858;7.42e-11;3!UBERON:0005156;7.18e-10;59!UBERON:0000990;7.18e-10;59!UBERON:0000995;1.31e-07;17!UBERON:0003975;3.09e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.59e-32,8;UBERON:0003135,6.61e-24,11;UBERON:0003133,4.32e-15,48;UBERON:0000991,6.58e-13,21;UBERON:0009196,6.58e-13,21;UBERON:0009117,6.58e-13,21;UBERON:0005564,6.58e-13,21;UBERON:0004176,2.35e-12,22;UBERON:0003101,2.35e-12,22;UBERON:0000079,2.35e-12,22;UBERON:0005156,2.40e-12,59;UBERON:0000990,2.40e-12,59;UBERON:0002369,7.42e-11,3;UBERON:0001235,7.42e-11,3;UBERON:0006858,7.42e-11,3 | |||
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|short_description=p@chr1:80167417..80167424,- | |short_description=p@chr1:80167417..80167424,- | ||
}} | }} |
Latest revision as of 10:33, 28 July 2015
Short description: | p@chr1:80167417..80167424, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:80167417..80167424, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.92e-37 | 7 |
germ cell | 4.92e-37 | 7 |
epithelial cell of uterus | 9.49e-20 | 6 |
stromal cell of endometrium | 9.49e-20 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.59e-32 | 8 |
male reproductive organ | 6.61e-24 | 11 |
reproductive organ | 4.32e-15 | 48 |
gonad | 6.58e-13 | 21 |
indifferent external genitalia | 6.58e-13 | 21 |
indifferent gonad | 6.58e-13 | 21 |
gonad primordium | 6.58e-13 | 21 |
external genitalia | 2.35e-12 | 22 |
male organism | 2.35e-12 | 22 |
male reproductive system | 2.35e-12 | 22 |
reproductive structure | 2.40e-12 | 59 |
reproductive system | 2.40e-12 | 59 |
adrenal gland | 7.42e-11 | 3 |
adrenal cortex | 7.42e-11 | 3 |
adrenal/interrenal gland | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 9.49e-20 | 6 |
germ cell and embryonal cancer | 2.35e-12 | 22 |
germ cell cancer | 2.35e-12 | 22 |
adenocarcinoma | 6.47e-11 | 25 |
carcinoma | 7.18e-10 | 106 |
reproductive organ cancer | 1.81e-09 | 29 |
cell type cancer | 2.36e-07 | 143 |