FFCP PHASE1:Hg19::chr1:66798118..66798132,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5142 | |EntrezGene=5142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |HGNC=8781 | ||
|TSSclassifier=strong | |||
|UniProt=B4DG71 | |UniProt=B4DG71 | ||
|association_with_transcript=21bp_to_AK294441_5end | |association_with_transcript=21bp_to_AK294441_5end | ||
|cluster_id=chr1:66798118..66798132,+ | |||
|description=CAGE_peak_10_at_PDE4B_5end | |description=CAGE_peak_10_at_PDE4B_5end | ||
|id=chr1:66798118..66798132,+ | |id=chr1:66798118..66798132,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.34e-23!140;CL:0002087!3.31e-18!119;CL:0000037!7.32e-16!172;CL:0000566!7.32e-16!172;CL:0002031!5.63e-15!124;CL:0000838!1.37e-14!52;CL:0000542!2.24e-14!53;CL:0000051!2.24e-14!53;CL:0000988!3.29e-14!182;CL:0002032!9.87e-14!165;CL:0000837!9.87e-14!165;CL:0002057!7.74e-12!42;CL:0000860!6.30e-10!45;CL:0000791!2.36e-09!18;CL:0000789!2.36e-09!18;CL:0002420!2.36e-09!18;CL:0002419!2.36e-09!18;CL:0000790!2.36e-09!18;CL:0000236!1.74e-08!14;CL:0000945!1.84e-07!24;CL:0000826!1.84e-07!24;CL:0002139!2.42e-07!24;CL:0000625!4.45e-07!11;CL:0000094!5.69e-07!8;CL:0000084!5.74e-07!25;CL:0000827!5.74e-07!25 | |ontology_enrichment_celltype=CL:0000738!3.34e-23!140;CL:0002087!3.31e-18!119;CL:0000037!7.32e-16!172;CL:0000566!7.32e-16!172;CL:0002031!5.63e-15!124;CL:0000838!1.37e-14!52;CL:0000542!2.24e-14!53;CL:0000051!2.24e-14!53;CL:0000988!3.29e-14!182;CL:0002032!9.87e-14!165;CL:0000837!9.87e-14!165;CL:0002057!7.74e-12!42;CL:0000860!6.30e-10!45;CL:0000791!2.36e-09!18;CL:0000789!2.36e-09!18;CL:0002420!2.36e-09!18;CL:0002419!2.36e-09!18;CL:0000790!2.36e-09!18;CL:0000236!1.74e-08!14;CL:0000945!1.84e-07!24;CL:0000826!1.84e-07!24;CL:0002139!2.42e-07!24;CL:0000625!4.45e-07!11;CL:0000094!5.69e-07!8;CL:0000084!5.74e-07!25;CL:0000827!5.74e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.96e-14;18!CL:0000789;6.96e-14;18!CL:0002419;6.96e-14;18!CL:0000236;1.34e-11;13!CL:0000094;5.61e-11;8!CL:0000625;2.05e-09;11!CL:0000860;2.52e-09;33!CL:0002057;2.52e-09;33!CL:0000542;4.35e-09;53!CL:0002087;1.04e-08;104!CL:0000084;1.34e-08;25!CL:0002139;7.65e-08;24!CL:0000081;2.39e-07;11!CL:0000624;2.90e-07;6!CL:0000738;4.05e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.16e-30,136;CL:0000037,2.99e-21,168;CL:0002087,1.71e-20,115;CL:0000988,6.00e-19,177;CL:0002031,1.01e-17,120;CL:0002032,1.23e-17,161;CL:0000837,1.23e-17,161;CL:0000838,5.22e-15,52;CL:0000542,1.59e-14,53;CL:0000051,1.59e-14,53;CL:0000791,3.93e-14,18;CL:0000789,3.93e-14,18;CL:0002420,3.93e-14,18;CL:0002419,3.93e-14,18;CL:0000790,3.93e-14,18;CL:0000094,6.91e-11,8;CL:0000236,1.62e-10,14;CL:0000860,3.16e-10,42;CL:0002057,3.16e-10,42;CL:0000625,1.57e-09,11;CL:0000766,2.31e-09,72;CL:0000084,9.20e-09,25;CL:0000827,9.20e-09,25;CL:0002139,3.82e-08,24;CL:0000473,4.65e-08,48;CL:0000234,4.65e-08,48;CL:0000624,2.00e-07,6;CL:0000081,2.75e-07,11;CL:0002009,8.45e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000790;6.96e-14;18!CL:0000051;4.35e-09;53!CL:0002057;1.44e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.06e-14!115 | |ontology_enrichment_uberon=UBERON:0007023!7.06e-14!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.97e-08,108 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.866364470720326,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0.313454721478088,0.286235987131057,0,0,0.458480434487708,0.57470412614962,0.708397031823113,4.32700704533794,8.44424675813868,2.01260960310899,0,0,0,0.619737604642413,0.853015394924529,4.40400659002271,9.41792194504192,5.81578897663411,6.07630438004385,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,2.78914844286822,0.822335776043652,0.619412741790207,2.58923153089935,0.768482119587302,1.89185783910868,4.48169384957604,3.22742341791913,4.06279459783025,3.01187743268168,0.818718450173537,3.14612878223118,7.95818120164347,7.70229664982625,7.67204550958849,0.329851300186716,0.398927315243264,0.426224750532694,4.35313857942876,3.40431134814684,5.60540024096017,1.25624332628372,1.5644487552606,0.434377689410233,2.42159801053347,4.41933163185078,6.64571013625857,0.845021145247767,0.212604299965044,0.838634582033504,1.01095768031846,1.20141514273205,0.803627933485401,0.285012743741249,0.19891667719909,0.182664153764634,5.27988733383968,6.55366333514558,3.55803701545422,7.68114400619713,4.40435585739614,8.62128659931725,3.30522436392431,6.67837628174755,10.2458334439701,22.9022503854666,15.6732023531344,2.64342657158052,3.92355994087075,1.31692042387539,3.540775862049,1.57204305099666,4.31763147898969,4.51403537554831,3.91106719960308,3.31413464014313,0,3.45372416344038,7.65975359434577,8.4182879941776,12.1861738694257,1.28091319725675,2.73124629875744,0.164437904603676,2.21080014228679,2.60822777161547,3.41059095272739,2.40786745280742,1.04535523804977,1.35971211237079,3.44898444241729,3.09264700934367,6.83153168452658,3.50421955756506,1.95325036156926,0.950452044448374,2.25862678616659,3.32765189001488,2.49861453104692,3.07810427657222,2.46338399076314,7.25784275609037,4.27904313253612,3.62061009706997,0,0.670700859703636,0,0.722878304769133,0.50133791063589,0.579386075843295,0.795285947051099,1.45990461090791,0.0945348171640679,0.221729397462564,0.351339142772504,0.785874452986276,0,0,0,0,0,5.96226560763355,5.71994910780128,4.08603251462521,3.18019851786728,0,0.694281003215189,0,1.67799774483962,0.275118041940067,1.67195973229448,0.258416759169329,0.35576626268671,2.34304428935269,0.805658634218294,6.0821768457481,0.976248230192678,3.30896772311282,1.62028389576352,4.55428614248807,1.79623498100936,3.0405099730497,3.06633274931766,1.89853131913626,1.64881569537367,10.5424333948851,7.75560528296651,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0.67355336034844,0.817309515567294,0.151357427644931,0.576175924479999,0.234321431833797,0,1.71141546463335,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0.113432183160021,1.61450672119976,0.640672166455702,0.423863802319124,1.50045548042201,0.103052529238439,1.03056216018252,0.930584281657949,2.53164498361899,0.389748020644795,1.26216887122057,0.184099797284599,0,0.355009592516614,0.201504196455281,0.508681776931463,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0,1.18157981336281,0,0,0.343135620597051,0,0,0,0.185176890317059,0,0,0,0,0.234817388471643,2.30986316417718,1.38895653772983,3.80508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.253991577168676,0.381988425558278,0,0,0,0.300343057843917,0.571652865261156,1.00917975910825,0,0.8800594298514,0,0,0,0,1.04007436911366,0,0,0,0.57191197463259,0,0,0.65147236858747,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0,0,6.10795356625974,3.66566877261179,2.05348858047597,1.01637849688985,0,0,0,0,7.49007023947182,8.97484377612075,11.603634376209,0.49076596687656,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.260650843404249,0,0,5.99627275756373,3.01999881146064,4.05564719653088,0,0,0,0,1.2276957863045,0,0,1.02341449813341,0,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0.170093705276516,0.863663664408557,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0.272999822815972,0.565621727814851,0,1.10273068709225,1.32687795048244,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0.753150406214233,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,1.19115887728894,1.64544909234478,1.94541993357815,3.24018862342869,0.79312517629427,0,0,0,0.185803175125719,0.577076851905779,0,0,0,0,0.84669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| ||
|short_description=p10@PDE4B | |short_description=p10@PDE4B | ||
}} | }} |
Latest revision as of 00:26, 19 September 2015
Short description: | p10@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PDE4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_AK294441_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | B4DG71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.16e-30 | 136 |
hematopoietic stem cell | 2.99e-21 | 168 |
nongranular leukocyte | 1.71e-20 | 115 |
hematopoietic cell | 6.00e-19 | 177 |
hematopoietic lineage restricted progenitor cell | 1.01e-17 | 120 |
hematopoietic oligopotent progenitor cell | 1.23e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-17 | 161 |
lymphoid lineage restricted progenitor cell | 5.22e-15 | 52 |
lymphocyte | 1.59e-14 | 53 |
common lymphoid progenitor | 1.59e-14 | 53 |
mature alpha-beta T cell | 3.93e-14 | 18 |
alpha-beta T cell | 3.93e-14 | 18 |
immature T cell | 3.93e-14 | 18 |
mature T cell | 3.93e-14 | 18 |
immature alpha-beta T cell | 3.93e-14 | 18 |
granulocyte | 6.91e-11 | 8 |
B cell | 1.62e-10 | 14 |
classical monocyte | 3.16e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.16e-10 | 42 |
CD8-positive, alpha-beta T cell | 1.57e-09 | 11 |
myeloid leukocyte | 2.31e-09 | 72 |
T cell | 9.20e-09 | 25 |
pro-T cell | 9.20e-09 | 25 |
endothelial cell of vascular tree | 3.82e-08 | 24 |
defensive cell | 4.65e-08 | 48 |
phagocyte | 4.65e-08 | 48 |
CD4-positive, alpha-beta T cell | 2.00e-07 | 6 |
blood cell | 2.75e-07 | 11 |
macrophage dendritic cell progenitor | 8.45e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.97e-08 | 108 |